Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P14780_001 | Banana | nucleus | 32.41 | 49.02 |
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 45.93 | 49.01 |
| KRH76829 | Soybean | nucleus | 46.85 | 48.94 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 29.44 | 48.77 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 28.33 | 48.57 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 32.78 | 48.1 |
| AT3G50700.1 | Thale cress | nucleus | 40.19 | 48.01 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 32.22 | 47.8 |
| CDY24490 | Canola | nucleus | 37.78 | 46.9 |
| CDX77936 | Canola | nucleus | 37.78 | 46.79 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 47.04 | 46.78 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 32.96 | 46.72 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 31.48 | 46.58 |
| Bra036098.1-P | Field mustard | nucleus, plastid | 37.59 | 46.56 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 49.26 | 45.78 |
| KRH08298 | Soybean | nucleus | 43.15 | 45.6 |
| GSMUA_Achr10P... | Banana | nucleus | 31.67 | 45.36 |
| KRH69942 | Soybean | nucleus | 43.7 | 44.95 |
| KRH69941 | Soybean | nucleus, plastid | 43.7 | 44.95 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 30.37 | 44.69 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 43.33 | 44.57 |
| CDX81372 | Canola | nucleus | 40.19 | 44.38 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 31.48 | 44.16 |
| CDY67009 | Canola | nucleus | 38.89 | 44.12 |
| AT5G66730.1 | Thale cress | nucleus | 40.56 | 43.8 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 22.78 | 43.77 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 47.78 | 43.58 |
| CDY57128 | Canola | nucleus | 39.63 | 43.5 |
| Bra037151.1-P | Field mustard | nucleus | 39.44 | 43.29 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 28.15 | 42.94 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 32.59 | 42.93 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 34.81 | 42.06 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 32.59 | 41.31 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 37.04 | 41.07 |
| GSMUA_Achr10P... | Banana | nucleus | 33.89 | 40.76 |
| EER95332 | Sorghum | nucleus | 39.26 | 40.38 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 39.44 | 40.34 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 39.26 | 40.3 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 34.44 | 39.83 |
| Zm00001d028139_P001 | Maize | nucleus | 39.63 | 39.7 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 29.07 | 39.45 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 39.07 | 39.37 |
| GSMUA_Achr11P... | Banana | nucleus | 30.0 | 39.13 |
| Os03t0197800-00 | Rice | nucleus | 39.81 | 38.95 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 34.07 | 37.86 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 33.15 | 37.6 |
| GSMUA_Achr10P... | Banana | nucleus | 32.78 | 36.95 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.15 | 36.61 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 28.89 | 35.94 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 33.33 | 35.86 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 32.04 | 35.31 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 30.74 | 35.1 |
| GSMUA_Achr11P... | Banana | nucleus | 32.96 | 34.83 |
| Solyc02g062940.2.1 | Tomato | nucleus | 41.85 | 34.45 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 31.67 | 34.2 |
| GSMUA_Achr11P... | Banana | nucleus | 33.15 | 33.58 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 33.15 | 32.72 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 22.59 | 32.28 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 22.59 | 32.11 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 21.85 | 31.89 |
| GSMUA_Achr10P... | Banana | nucleus | 22.04 | 31.07 |
| PGSC0003DMT400040064 | Potato | nucleus | 42.22 | 30.98 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 21.67 | 30.55 |
| GSMUA_Achr11P... | Banana | nucleus | 31.48 | 30.04 |
| GSMUA_Achr10P... | Banana | nucleus | 21.67 | 29.32 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 22.78 | 29.01 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.52 | 20.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P07200_001 | EnsemblPlants:GSMUA_Achr4T07200_001 | EnsemblPlantsGene:GSMUA_Achr4G07200_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF20 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000296DADD |
| UniProt:M0SLT7 | MapMan:15.5.15 | : | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G07200_001]
Coordinates
chr4:-:5364860..5367289
Molecular Weight (calculated)
57420.1 Da
IEP (calculated)
9.711
GRAVY (calculated)
-0.437
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MTISNSGSGE ASISSSDRLR APAPPSPLPP PSIAVVKKKR NLPGTPDPEA EVVALSPRTL LATNRFVCEI CSKGFQRDQN LQLHRRGHNL PWKLRQRTGK
101: EPRKRVYVCP EAGCVHHDPS RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYR CDCGTLFSRR DSFVTHRAIC DALAEESSKT
201: ASPPTDPKPS AEDDGEAAAV SETTAAAAVV APPFSLQQVE PLVRQGLWSS SSSLLPPPLF SSMASFNFDA IQNKNTRKLE NPIGSLQYVP PPSTSIANTS
301: CATASSSSRS NTSLFASLFA SSITTAAAHT TTFLSDRMGA MGHDDRPLME PPSLGLATNG GPAWLFSPQA QAHGRRPFAP PAPSPHMSAT ALLQKAAHMV
401: ATPTGSSFLK GFGLDAPTGH QEKMIQGSNL QWGQQQHHHQ PETEPGAPML SAWLGLGLAY EPDLMTGSSS LFRAKPATTL DLLGLGMGAV GGSAKGGLSA
501: LTTSAGGGID MRSAAATGEW KGAERKPASP SSKCSDRKLM
101: EPRKRVYVCP EAGCVHHDPS RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYR CDCGTLFSRR DSFVTHRAIC DALAEESSKT
201: ASPPTDPKPS AEDDGEAAAV SETTAAAAVV APPFSLQQVE PLVRQGLWSS SSSLLPPPLF SSMASFNFDA IQNKNTRKLE NPIGSLQYVP PPSTSIANTS
301: CATASSSSRS NTSLFASLFA SSITTAAAHT TTFLSDRMGA MGHDDRPLME PPSLGLATNG GPAWLFSPQA QAHGRRPFAP PAPSPHMSAT ALLQKAAHMV
401: ATPTGSSFLK GFGLDAPTGH QEKMIQGSNL QWGQQQHHHQ PETEPGAPML SAWLGLGLAY EPDLMTGSSS LFRAKPATTL DLLGLGMGAV GGSAKGGLSA
501: LTTSAGGGID MRSAAATGEW KGAERKPASP SSKCSDRKLM
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.