Factsheet for GSMUA_Achr11P01480_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04118	Canola	nucleus	19.51	87.39
CDY09390	Canola	nucleus	19.14	85.71
CDY53540	Canola	nucleus	24.58	67.53
CDY04117	Canola	nucleus	24.77	61.68
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	41.46	60.71
GSMUA_Achr11P...	Banana	nucleus	52.53	54.79
GSMUA_Achr3P25410_001	Banana	nucleus	31.71	51.84
KRG89168	Soybean	nucleus, plastid	33.02	50.57
GSMUA_Achr7P14780_001	Banana	nucleus	33.21	49.58
GSMUA_Achr3P13990_001	Banana	nucleus	39.4	49.3
GSMUA_Achr6P27030_001	Banana	nucleus	32.65	49.15
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	36.59	48.99
GSMUA_Achr2P08460_001	Banana	nucleus	28.52	48.25
GSMUA_Achr1P07110_001	Banana	nucleus	43.34	47.53
GSMUA_Achr2P16690_001	Banana	nucleus	32.65	47.28
GSMUA_Achr9P06650_001	Banana	nucleus	32.46	47.14
GSMUA_Achr1P17940_001	Banana	nucleus	41.28	47.11
GSMUA_Achr2P08910_001	Banana	nucleus	33.4	46.23
GSMUA_Achr9P23870_001	Banana	nucleus	37.52	46.08
GSMUA_Achr7P13540_001	Banana	nucleus	31.52	46.03
GSMUA_Achr5P22140_001	Banana	nucleus	32.27	45.14
GSMUA_Achr7P09150_001	Banana	nucleus	34.71	45.12
GSMUA_Achr10P...	Banana	nucleus	39.96	44.47
GSMUA_Achr10P...	Banana	nucleus	30.58	43.24
GSMUA_Achr4P04310_001	Banana	nucleus	38.27	43.13
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	39.59	43.06
GSMUA_Achr10P...	Banana	nucleus	35.08	41.65
GSMUA_Achr1P02080_001	Banana	nucleus	41.84	40.77
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	37.15	40.49
KRH49489	Soybean	nucleus, plastid	40.34	40.34
KRH49485	Soybean	nucleus	41.09	40.33
GSMUA_Achr8P10040_001	Banana	nucleus	33.77	40.27
KRG90705	Soybean	nucleus	42.78	40.21
KRH36039	Soybean	nucleus	42.78	39.93
CDY45271	Canola	nucleus	31.14	39.9
KRG89167	Soybean	nucleus, plastid	41.09	39.89
VIT_01s0010g02100.t01	Wine grape	nucleus	42.78	39.86
KRG91985	Soybean	nucleus	41.65	39.64
GSMUA_Achr7P22720_001	Banana	mitochondrion	20.83	39.5
KRH34792	Soybean	nucleus	41.09	39.46
Zm00001d021403_P001	Maize	nucleus	35.65	39.26
PGSC0003DMT400075837	Potato	nucleus	38.09	39.19
CDY59418	Canola	nucleus	30.21	38.98
CDY45270	Canola	nucleus	32.65	38.67
Solyc04g008500.2.1	Tomato	nucleus	37.34	38.49
GSMUA_Achr5P06450_001	Banana	nucleus	34.33	38.45
Bra026204.1-P	Field mustard	nucleus, plastid	32.46	38.44
OQU89911	Sorghum	nucleus, plastid	38.27	38.27
KXG25416	Sorghum	nucleus	39.59	38.16
CDY17440	Canola	nucleus	34.15	38.08
GSMUA_Achr4P05240_001	Banana	nucleus	35.65	38.0
GSMUA_Achr11P...	Banana	nucleus	29.08	37.44
Os08t0554400-02	Rice	nucleus	38.46	37.41
CDX81653	Canola	nucleus	32.46	37.05
Bra026819.1-P	Field mustard	nucleus	32.46	37.05
Bra026203.1-P	Field mustard	nucleus, plastid	31.89	36.64
CDY17614	Canola	nucleus, plastid	35.08	36.45
AT1G14580.3	Thale cress	nucleus	32.83	36.38
Bra024833.1-P	Field mustard	plastid	34.9	36.26
CDY17615	Canola	nucleus	35.83	36.24
AT2G02080.3	Thale cress	nucleus, plastid	35.08	36.24
CDY03081	Canola	nucleus	35.46	36.07
GSMUA_Achr11P...	Banana	nucleus	38.27	36.04
CDY15814	Canola	nucleus	31.89	35.94
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	44.47	35.85
CDY03080	Canola	nucleus, plastid	34.71	35.85
Bra026616.1-P	Field mustard	nucleus	33.96	35.42
CDY09391	Canola	nucleus	37.15	34.92
CDY15811	Canola	nucleus	37.15	34.86
GSMUA_Achr4P14030_001	Banana	nucleus	35.27	34.62
Bra024834.1-P	Field mustard	nucleus, plastid	35.83	34.6
Bra023223.1-P	Field mustard	plastid	30.96	34.38
GSMUA_Achr7P24170_001	Banana	nucleus	32.27	34.26
Zm00001d031992_P001	Maize	nucleus	38.84	34.21
Bra026617.1-P	Field mustard	nucleus	37.15	33.56
Bra040974.1-P	Field mustard	nucleus, plastid	36.4	33.16
GSMUA_Achr4P07200_001	Banana	nucleus	33.58	33.15
CDY12268	Canola	nucleus	27.58	32.96
AT2G02070.2	Thale cress	nucleus	36.96	32.72
GSMUA_Achr3P29940_001	Banana	nucleus	35.65	32.7
GSMUA_Achr7P25960_001	Banana	nucleus	36.02	32.43
KXG36163	Sorghum	nucleus	35.27	32.3
Zm00001d006319_P001	Maize	nucleus	33.58	32.02
GSMUA_Achr7P18610_001	Banana	nucleus	22.51	31.75
CDY68983	Canola	nucleus	22.51	30.69
GSMUA_Achr6P02490_001	Banana	nucleus	21.01	30.27
GSMUA_Achr5P23130_001	Banana	nucleus	21.39	30.0
GSMUA_Achr10P...	Banana	nucleus	21.2	29.5
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	21.01	29.24
GSMUA_Achr10P...	Banana	nucleus	21.2	28.32
GSMUA_Achr3P20220_001	Banana	nucleus	21.76	27.36
GSMUA_AchrUn_...	Banana	nucleus	33.96	20.36

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr11G01480_001	EnsemblPlants:GSMUA_Achr11P01480_001	EnsemblPlants:GSMUA_Achr11T01480_001	InterPro:IPR013087	UniProt:M0RNH8	PFAM:PF12171
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF66	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000295D167	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

Putative ZOS2-15 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01480_001]

Coordinates

chr11:+:1015104..1018456

Molecular Weight (calculated)

57760.8 Da

IEP (calculated)

9.283

GRAVY (calculated)

-0.576

Length

533 amino acids

Sequence
(BLAST)

001: MASASSSSPF FGGIRDEDLQ KQMKQQQQKS SATVPAPAAA SERKRRNQPG NPSNFSNLWP QPNPHVSAAD PDAEVIALSP TSLLATNRFI CEVCNKGFQR
101: EQNLQLHRRG HNLPWKLRQK SSKEVRRRVY LCPEPTCVHH HPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKRYAVQSDL KAHAKTCGTR EYRCDCGTLF
201: SSERERETER EKGTSRSSKH VPISLHLFQC GSHISVHQGI GEISQHIWRD SFITHRAFCD ALAQESSRPP TAGLHALGNH LYGNPTTMTS GLSQVNAHLS
301: SLQAQSHAPT DLLRTGGGPG SQLEHLISSA TPSSRPLHGL TQLHDLQCSS TITSSTSAAA TAASVFNLGF FSHNSSSTSS IGNSNRTNSL YNTSMQSDLM
401: LPQMSATALL QKAAQMGVTT SGGPSLLRGF ARSSSSRCSF SGDGGDDGGG LQAQTENEAH LQNLMMTLAN GGTDLIAGGF RALDTGLCIM DETKFDPSGV
501: RNLEGSDQLT RDFLGVGSRV RSISSGITRR EPI

Best Arabidopsis Sequence Match ( AT2G02080.3 )
(BLAST)

001: MSSSSYNTSV IPSSSSSAQP FFITSSGTGD NDFNRKDTFM SMIQQPNSSA PPPKKRRNQP GNPNPDAEVV ALSPKTLMAT NRFICDVCNK GFQREQNLQL
101: HRRGHNLPWK LKQKSTKEVK RKVYLCPEPT CVHHDPSRAL GDLTGIKKHY YRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTKEYRCDC GTIFSRRDSY
201: ITHRAFCDAL IQETARNPTV SFTSMTAASS GVGSGGIYGR LGGGSALSHH HLSDHPNFGF NPLVGYNLNI ASSDNRRDFI PQSSNPNFLI QSASSQGMLN
301: TTPNNNNQSF MNQHGLIQFD PVDNINLKSS GTNNSFFNLG FFQENTKNSE TSLPSLYSTD VLVHHREENL NAGSNVSATA LLQKATQMGS VTSNDPSALF
401: RGLASSSNSS SVIANHFGGG RIMENDNNGN LQGLMNSLAA VNGGGGSGGS IFDVQFGDNG NMSGSDKLTL DFLGVGGMVR NVNRGGGGGG RGSARGGVSL
501: DGEAKFPEQN YPFGRG

Arabidopsis Description

IDD4Protein indeterminate-domain 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GYC1]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.