Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 24.65 | 88.24 |
| CDY09390 | Canola | nucleus | 24.18 | 86.55 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 73.0 | 66.6 |
| CDY53540 | Canola | nucleus | 30.28 | 66.49 |
| CDY04117 | Canola | nucleus | 32.63 | 64.95 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 47.18 | 55.22 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 42.02 | 50.14 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 36.62 | 49.52 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 42.25 | 48.91 |
| KRG89168 | Soybean | nucleus, plastid | 39.91 | 48.85 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 37.09 | 48.47 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 44.37 | 47.49 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 53.29 | 46.71 |
| GSMUA_Achr10P... | Banana | nucleus | 51.64 | 45.93 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 44.13 | 45.85 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 46.71 | 45.85 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 39.2 | 45.75 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 40.85 | 45.67 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 38.26 | 44.41 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 39.44 | 43.64 |
| GSMUA_Achr10P... | Banana | nucleus | 38.03 | 42.97 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 49.3 | 42.86 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 49.06 | 42.74 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 35.21 | 42.37 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 49.3 | 42.0 |
| GSMUA_Achr10P... | Banana | nucleus | 44.13 | 41.87 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 46.24 | 41.65 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 27.23 | 41.28 |
| GSMUA_Achr11P... | Banana | nucleus | 49.06 | 40.9 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 42.25 | 40.27 |
| Os09t0555700-02 | Rice | nucleus | 49.77 | 39.63 |
| GSMUA_Achr11P... | Banana | nucleus | 49.3 | 39.4 |
| KRH36039 | Soybean | nucleus | 52.58 | 39.23 |
| KRG90705 | Soybean | nucleus | 52.11 | 39.15 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 43.66 | 39.08 |
| CDY59418 | Canola | nucleus | 37.32 | 38.5 |
| KRH49485 | Soybean | nucleus | 49.06 | 38.49 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 51.41 | 38.29 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 49.06 | 38.28 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 49.06 | 38.21 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 49.06 | 38.21 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 48.83 | 38.17 |
| KRG89167 | Soybean | nucleus, plastid | 48.59 | 37.7 |
| CDY03081 | Canola | nucleus | 46.01 | 37.4 |
| CDY17615 | Canola | nucleus | 46.24 | 37.38 |
| CDY45271 | Canola | nucleus | 36.38 | 37.26 |
| CDY17440 | Canola | nucleus | 41.78 | 37.24 |
| KRH49489 | Soybean | nucleus, plastid | 46.48 | 37.15 |
| KRH34792 | Soybean | nucleus | 48.36 | 37.12 |
| KRG91985 | Soybean | nucleus | 48.59 | 36.96 |
| PGSC0003DMT400075837 | Potato | nucleus | 44.13 | 36.29 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 42.72 | 36.26 |
| CDY15814 | Canola | nucleus | 40.14 | 36.15 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 43.66 | 36.05 |
| GSMUA_Achr11P... | Banana | nucleus | 34.98 | 35.99 |
| GSMUA_Achr11P... | Banana | nucleus | 47.65 | 35.87 |
| CDY09391 | Canola | nucleus | 47.65 | 35.8 |
| CDX81653 | Canola | nucleus | 39.2 | 35.76 |
| Bra026819.1-P | Field mustard | nucleus | 39.2 | 35.76 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 46.24 | 35.69 |
| Bra026616.1-P | Field mustard | nucleus | 42.72 | 35.62 |
| Solyc04g008500.2.1 | Tomato | nucleus | 43.19 | 35.59 |
| CDY15811 | Canola | nucleus | 47.42 | 35.56 |
| CDY45270 | Canola | nucleus | 37.56 | 35.56 |
| CDY17614 | Canola | nucleus, plastid | 42.72 | 35.48 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 37.32 | 35.33 |
| Bra024833.1-P | Field mustard | plastid | 42.49 | 35.28 |
| AT1G14580.3 | Thale cress | nucleus | 39.67 | 35.14 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 54.23 | 34.95 |
| CDY03080 | Canola | nucleus, plastid | 42.25 | 34.88 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 44.13 | 34.62 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 37.56 | 34.48 |
| Bra026617.1-P | Field mustard | nucleus | 47.65 | 34.41 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 46.48 | 33.85 |
| AT2G02070.2 | Thale cress | nucleus | 46.95 | 33.22 |
| Bra023223.1-P | Field mustard | plastid | 37.32 | 33.12 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 44.84 | 32.87 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 41.31 | 32.59 |
| CDY12268 | Canola | nucleus | 33.1 | 31.61 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 43.19 | 31.08 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 27.23 | 30.53 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 26.29 | 30.27 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 26.76 | 30.16 |
| GSMUA_Achr10P... | Banana | nucleus | 26.76 | 29.77 |
| CDY68983 | Canola | nucleus | 26.76 | 29.16 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 25.59 | 28.46 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 26.29 | 26.42 |
| GSMUA_Achr10P... | Banana | nucleus | 23.71 | 25.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.37 | 21.26 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr3G13990_001 | EnsemblPlants:GSMUA_Achr3P13990_001 | EnsemblPlants:GSMUA_Achr3T13990_001 | InterPro:IPR013087 | UniProt:M0SEG6 | PFAM:PF12171 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF50 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000295B705 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G13990_001]
Coordinates
chr3:-:13126855..13129496
Molecular Weight (calculated)
45630.8 Da
IEP (calculated)
10.096
GRAVY (calculated)
-0.663
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASSSVPL FGIREGGEQY NKPPPPPTNQ QSSSSAPIAP KKKKKKRNLP GNPNPDAEVI ALSPKTLLAT NRFICEVCNK GFQREQNLQL HRRGHNLPWK
101: LKQKNPKEAR RRVYLCPETT CVHHDPSRAL GDLTGIKKHY CRKHGEKKWK CDRCSKRYAV QSDWKAHAKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL
201: AQESARLPSG MSAIGSHFEP AKLFDGNPMR NNNNIDVSCL LASSVHNESA AAPLMSATAL LQKAAQMGVT SSGRCGSSFL TGFGSTYSSG SGGSKHANHR
301: DEFRSSGPGQ GSRTQVENEN HFQNLMFSLA NGSSGIFGGG NERETGLGGF GPGLCNLSSG GMGGADGLTR DFLGVGGVMR SMGAGARQRG GEVGVAMAGA
401: LDSETKSGHC SLPSTDGSLQ SRRNNP
101: LKQKNPKEAR RRVYLCPETT CVHHDPSRAL GDLTGIKKHY CRKHGEKKWK CDRCSKRYAV QSDWKAHAKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL
201: AQESARLPSG MSAIGSHFEP AKLFDGNPMR NNNNIDVSCL LASSVHNESA AAPLMSATAL LQKAAQMGVT SSGRCGSSFL TGFGSTYSSG SGGSKHANHR
301: DEFRSSGPGQ GSRTQVENEN HFQNLMFSLA NGSSGIFGGG NERETGLGGF GPGLCNLSSG GMGGADGLTR DFLGVGGVMR SMGAGARQRG GEVGVAMAGA
401: LDSETKSGHC SLPSTDGSLQ SRRNNP
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.