CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04118	Canola	nucleus	19.58	93.28
KRH36039	Soybean	nucleus	93.47	92.82
CDY09390	Canola	nucleus	19.22	91.6
KRG89168	Soybean	nucleus, plastid	47.62	77.59
CDY53540	Canola	nucleus	24.34	71.13
CDY04117	Canola	nucleus	26.63	70.56
KRH49489	Soybean	nucleus, plastid	63.14	67.17
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	40.04	62.36
VIT_01s0010g02100.t01	Wine grape	nucleus	61.02	60.49
KRH67268	Soybean	nucleus	26.1	56.7
GSMUA_Achr9P23870_001	Banana	nucleus	42.33	55.3
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	38.45	54.77
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	46.91	54.29
KRH49485	Soybean	nucleus	51.5	53.78
KRH34792	Soybean	nucleus	51.85	52.97
KRG91985	Soybean	nucleus	51.85	52.5
KRG89167	Soybean	nucleus, plastid	50.79	52.46
GSMUA_Achr3P13990_001	Banana	nucleus	39.15	52.11
GSMUA_Achr1P07110_001	Banana	nucleus	44.62	52.06
GSMUA_Achr4P04310_001	Banana	nucleus	43.21	51.8
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	44.09	51.12
GSMUA_Achr10P...	Banana	nucleus	42.15	49.9
GSMUA_Achr1P17940_001	Banana	nucleus	41.09	49.89
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	57.14	49.02
PGSC0003DMT400075837	Potato	nucleus	43.39	47.49
GSMUA_Achr1P02080_001	Banana	nucleus	44.8	46.44
Solyc04g008500.2.1	Tomato	nucleus	42.33	46.42
Zm00001d021403_P001	Maize	nucleus	38.8	45.45
Os09t0555700-02	Rice	nucleus	42.68	45.23
TraesCS5A01G356100.1	Wheat	nucleus, plastid	43.03	44.77
TraesCS5B01G358600.1	Wheat	nucleus, plastid	42.86	44.51
TraesCS5D01G364900.1	Wheat	nucleus, plastid	42.86	44.42
CDY45271	Canola	nucleus	32.28	43.99
OQU89911	Sorghum	nucleus, plastid	40.92	43.53
KRH51873	Soybean	nucleus	35.8	43.28
KRH47108	Soybean	nucleus	37.92	43.17
KRH15560	Soybean	nucleus	31.04	43.14
CDY59418	Canola	nucleus	31.39	43.1
KXG25416	Sorghum	nucleus	41.98	43.04
Bra026204.1-P	Field mustard	nucleus, plastid	34.04	42.89
CDY45270	Canola	nucleus	34.04	42.89
GSMUA_Achr11P...	Banana	nucleus	40.21	42.78
CDY03081	Canola	nucleus	39.15	42.37
CDY17615	Canola	nucleus	39.33	42.31
Os08t0554400-02	Rice	nucleus	40.74	42.15
KRH61193	Soybean	nucleus	35.1	42.07
GSMUA_Achr4P05240_001	Banana	nucleus	37.04	42.0
KRH23306	Soybean	nucleus	35.1	41.46
TraesCS6A01G254500.1	Wheat	nucleus	42.15	41.35
TraesCS6B01G271000.1	Wheat	nucleus	41.98	41.32
GSMUA_Achr11P...	Banana	nucleus	37.21	41.29
KRH10015	Soybean	nucleus	34.57	41.26
KRH32064	Soybean	nucleus	33.69	41.25
CDY17440	Canola	nucleus	34.74	41.21
KRH76829	Soybean	nucleus	37.57	41.2
KRH44134	Soybean	nucleus	38.45	41.13
TraesCS6D01G235800.1	Wheat	nucleus	41.8	41.0
Bra026203.1-P	Field mustard	nucleus, plastid	33.51	40.95
CDY09391	Canola	nucleus	40.92	40.92
KRH05443	Soybean	nucleus	31.75	40.91
Bra026819.1-P	Field mustard	nucleus	33.69	40.9
KRH71370	Soybean	nucleus	32.98	40.83
TraesCS2B01G421100.1	Wheat	nucleus	43.92	40.69
CDY15811	Canola	nucleus	40.74	40.67
EES11271	Sorghum	nucleus	42.86	40.57
Zm00001d026113_P006	Maize	nucleus	42.86	40.57
KRH22332	Soybean	nucleus	33.86	40.51
CDX81653	Canola	nucleus	33.33	40.47
Bra024834.1-P	Field mustard	nucleus, plastid	39.33	40.4
CDY15814	Canola	nucleus	33.69	40.38
Zm00001d017560_P001	Maize	nucleus	41.45	40.38
KRH25657	Soybean	nucleus	33.51	40.34
AT2G02080.3	Thale cress	nucleus, plastid	36.51	40.12
KRH55868	Soybean	nucleus	33.51	40.08
KRH49655	Soybean	nucleus	25.57	40.06
KRH08298	Soybean	nucleus	35.98	39.92
KRG95590	Soybean	nucleus	32.28	39.78
KRG92880	Soybean	nucleus	37.04	39.7
KRH69941	Soybean	nucleus, plastid	36.68	39.62
KRH69942	Soybean	nucleus	36.68	39.62
GSMUA_Achr11P...	Banana	nucleus	39.51	39.58
KXG31026	Sorghum	nucleus	41.45	39.5
Bra026617.1-P	Field mustard	nucleus	41.09	39.49
KRH26995	Soybean	nucleus	33.33	39.38
KRH33908	Soybean	nucleus, plastid	37.04	39.33
Zm00001d031992_P001	Maize	nucleus	41.8	39.17
Bra026616.1-P	Field mustard	nucleus	35.27	39.14
Os02t0672100-01	Rice	nucleus	42.15	38.86
Os04t0566400-02	Rice	nucleus	41.98	38.83
KRH67672	Soybean	nucleus	35.1	38.72
Bra040974.1-P	Field mustard	nucleus, plastid	39.86	38.63
AT1G14580.3	Thale cress	nucleus	32.63	38.46
KRG95964	Soybean	nucleus	34.57	38.43
CDY17614	Canola	nucleus, plastid	34.74	38.4
CDY03080	Canola	nucleus, plastid	34.92	38.37
Bra024833.1-P	Field mustard	plastid	34.57	38.21
AT2G02070.2	Thale cress	nucleus	40.21	37.87
KRH19850	Soybean	nucleus	34.92	37.71
Bra023223.1-P	Field mustard	plastid	31.92	37.71
TraesCS2D01G400300.2	Wheat	nucleus	43.92	37.61
Zm00001d002654_P003	Maize	nucleus	41.98	37.6
KRH32442	Soybean	nucleus	35.1	37.41
TraesCS2A01G403200.2	Wheat	nucleus	43.74	37.41
KRH71547	Soybean	nucleus	28.4	37.01
KRH68150	Soybean	nucleus	29.28	36.64
KXG36163	Sorghum	nucleus	37.57	36.6
KRH68532	Soybean	nucleus	32.98	36.52
KRG96824	Soybean	nucleus	32.63	36.49
KRG96409	Soybean	nucleus	34.22	36.26
CDY12268	Canola	nucleus	28.4	36.1
KRH24905	Soybean	nucleus	34.04	35.67
KRH26399	Soybean	nucleus	31.39	35.6
KRH22919	Soybean	nucleus	31.92	35.56
Zm00001d006319_P001	Maize	nucleus	34.39	34.88
CDY68983	Canola	nucleus	23.81	34.53
KRG89014	Soybean	nucleus	34.22	33.8
KRH41885	Soybean	nucleus	20.63	30.79
KRH60588	Soybean	nucleus	21.52	30.5
KRH42485	Soybean	nucleus	23.1	28.98
KRH58582	Soybean	nucleus	22.4	28.86
KRH38986	Soybean	nucleus	23.28	27.85
KRH48724	Soybean	nucleus	23.46	27.54

Protein Annotations

EntrezGene:100799389	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02012633	EnsemblPlantsGene:GLYMA_20G109400	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013087	UniProt:K7N2T9	EnsemblPlants:KRG90705
ProteinID:KRG90705	ProteinID:KRG90705.1	ProteinID:KRG90706.1	ProteinID:KRG90707.1	ProteinID:KRG90708.1	PFAM:PF12171
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF50	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000233DB87	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:35188332..35195347

Molecular Weight (calculated)

61172.4 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.827

Length

567 amino acids

Sequence
(BLAST)

001: MAASSSSASL FGFREEDQNQ MKQQHSLTPS SSTTPAAPPP QKKKRNQPGT PYPDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK
101: QKTTKEPKRK VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAQ
201: ESARQPPSLS GGGIGSHLYG STTNMALNLS QVGSQISTMQ DPNAQPTELL RLGAASGRTG QFDHILGSPF RPSNQQQQQQ PFFMSSEPNQ TYHHPDQNKP
301: FQQGLMQLSD HLNNNSHHNN SPFSLPFLSN NTSNASFSEH FNNANGGGGN NNNNNNNEGT NYFATSSAPS LFSNSVNASA LSHMSATALL QKAAQMGATT
401: SNGGTASLLK SFGSASSSSG GGGSKLVNAA NYVSGMFGGN NHVNEQSNSN LQDLMNSFAV GGNSSIFEDG FEAYEHSNNN SNRDPKVHAM SGSSSSIGGS
501: DRLTRDFLGV GQIVRGMSGS GGVAQREQQQ QHGFNLSSLE AERYNNNSNN AAPSSGQAFG GGGGNFQ

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.