Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 22.2 | 88.24 |
| CDY09390 | Canola | nucleus | 21.78 | 86.55 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 62.79 | 60.61 |
| CDY53540 | Canola | nucleus | 24.52 | 59.79 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 45.45 | 59.07 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 53.28 | 58.06 |
| CDY04117 | Canola | nucleus | 26.0 | 57.48 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 58.56 | 56.65 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 53.28 | 51.85 |
| KRG89168 | Soybean | nucleus, plastid | 38.05 | 51.72 |
| GSMUA_Achr10P... | Banana | nucleus | 51.59 | 50.94 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 41.86 | 49.75 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 41.65 | 46.24 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 30.66 | 46.03 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 35.73 | 45.92 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 53.07 | 45.89 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 31.5 | 45.71 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 54.33 | 44.93 |
| KRG91985 | Soybean | nucleus | 53.07 | 44.82 |
| KRH49485 | Soybean | nucleus | 51.16 | 44.57 |
| KRH34792 | Soybean | nucleus | 52.01 | 44.32 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 33.4 | 44.26 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 35.52 | 44.09 |
| KRG89167 | Soybean | nucleus, plastid | 51.16 | 44.08 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 42.92 | 43.47 |
| Zm00001d021403_P001 | Maize | nucleus | 44.4 | 43.39 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 33.4 | 43.29 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 32.35 | 43.22 |
| KRG90705 | Soybean | nucleus | 51.8 | 43.21 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 33.19 | 42.78 |
| KRH36039 | Soybean | nucleus | 51.37 | 42.56 |
| GSMUA_Achr10P... | Banana | nucleus | 39.96 | 42.09 |
| GSMUA_Achr10P... | Banana | nucleus | 32.98 | 41.38 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 35.73 | 41.22 |
| KRH49489 | Soybean | nucleus, plastid | 46.3 | 41.09 |
| Os08t0554400-02 | Rice | nucleus | 47.57 | 41.06 |
| KXG25416 | Sorghum | nucleus | 47.78 | 40.87 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 32.98 | 40.52 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 55.81 | 39.94 |
| OQU89911 | Sorghum | nucleus, plastid | 44.82 | 39.77 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 41.44 | 39.2 |
| PGSC0003DMT400075837 | Potato | nucleus | 42.71 | 39.0 |
| CDY59418 | Canola | nucleus | 33.83 | 38.74 |
| Solyc04g008500.2.1 | Tomato | nucleus | 42.28 | 38.68 |
| GSMUA_Achr11P... | Banana | nucleus | 43.13 | 38.27 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 36.15 | 38.26 |
| CDY45271 | Canola | nucleus | 33.19 | 37.74 |
| CDY17440 | Canola | nucleus | 37.63 | 37.24 |
| GSMUA_Achr11P... | Banana | nucleus | 44.4 | 37.1 |
| CDY45270 | Canola | nucleus | 35.1 | 36.89 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 34.88 | 36.67 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 21.78 | 36.65 |
| Zm00001d031992_P001 | Maize | nucleus | 46.51 | 36.36 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 36.15 | 35.92 |
| GSMUA_Achr11P... | Banana | nucleus | 38.27 | 35.42 |
| CDY15814 | Canola | nucleus | 35.31 | 35.31 |
| CDY03081 | Canola | nucleus | 39.11 | 35.31 |
| CDY17615 | Canola | nucleus | 38.9 | 34.91 |
| CDY17614 | Canola | nucleus, plastid | 37.63 | 34.7 |
| Bra024833.1-P | Field mustard | plastid | 37.42 | 34.5 |
| Bra026819.1-P | Field mustard | nucleus | 34.04 | 34.48 |
| Bra026616.1-P | Field mustard | nucleus | 37.21 | 34.44 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 37.42 | 34.3 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 33.62 | 34.27 |
| CDX81653 | Canola | nucleus | 33.83 | 34.26 |
| KXG36163 | Sorghum | nucleus | 42.07 | 34.19 |
| CDY03080 | Canola | nucleus, plastid | 37.21 | 34.11 |
| GSMUA_Achr11P... | Banana | nucleus | 29.81 | 34.06 |
| Bra023223.1-P | Field mustard | plastid | 34.25 | 33.75 |
| CDY09391 | Canola | nucleus | 40.38 | 33.69 |
| CDY15811 | Canola | nucleus | 40.38 | 33.63 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 38.9 | 33.33 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 35.31 | 33.27 |
| Zm00001d006319_P001 | Maize | nucleus | 38.9 | 32.92 |
| AT1G14580.3 | Thale cress | nucleus | 33.4 | 32.85 |
| CDY68983 | Canola | nucleus | 27.06 | 32.74 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 37.42 | 32.6 |
| Bra026617.1-P | Field mustard | nucleus | 40.38 | 32.37 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 39.75 | 32.14 |
| CDY12268 | Canola | nucleus | 29.81 | 31.61 |
| AT2G02070.2 | Thale cress | nucleus | 39.96 | 31.4 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 38.9 | 31.08 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 38.05 | 30.98 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 35.1 | 30.74 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 22.2 | 27.78 |
| GSMUA_Achr10P... | Banana | nucleus | 22.41 | 27.68 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 21.99 | 27.37 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 20.72 | 26.49 |
| GSMUA_Achr10P... | Banana | nucleus | 20.93 | 24.81 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 22.2 | 24.76 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 19.66 | 24.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.15 | 19.24 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr4G04310_001 | EnsemblPlants:GSMUA_Achr4P04310_001 | EnsemblPlants:GSMUA_Achr4T04310_001 | InterPro:IPR013087 | UniProt:M0SKZ8 | PFAM:PF12171 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF50 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0002958299 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
Zinc finger protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr4G04310_001]
Coordinates
chr4:+:3380626..3383553
Molecular Weight (calculated)
50700.9 Da
IEP (calculated)
9.006
GRAVY (calculated)
-0.470
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAASFSDAE AVVIALSPKS LLATNRFICE VCNKGFQREQ NLQLHRRGHN LPWKLKQKNP KEVCRKVYIC PETTCVHHDP SRALGDLTGI KKHYSRKHGE
101: KKWKCDKCSK RYAVPSDLKA HSKICGTREY RCDCGTLFSR RDSFITHRAF CDALAQEGGR IPTAMNTIGS YLYGNAGTNL GLPQLNAQLS LEDRAHVVPP
201: DPLRLAGNGG ATRFNHLTVP ALQPIHPSRS APFYLGGGSS RDLGDDPLLL QSKPFNGLMQ LQQLHSSAAT ATDLFNLGIL SDSSNRSIAI KPNAHPLISD
301: RLNSTAGGSN EPPTLFAGNL LSNHVHPNMS SSTYDQSVKS DSAPPHMSAT ALLQKAAQMG VTPNRGSGSS LLKGLGSSYS SGKYTSFGAG FDGAEGSSAA
401: AQLQDVMNSL ANGNHMCSST NESELQQNQS GSGMGAPDSL TRDFLGVGGM MRSMGGGMTQ REQHLSGSYG SLH
101: KKWKCDKCSK RYAVPSDLKA HSKICGTREY RCDCGTLFSR RDSFITHRAF CDALAQEGGR IPTAMNTIGS YLYGNAGTNL GLPQLNAQLS LEDRAHVVPP
201: DPLRLAGNGG ATRFNHLTVP ALQPIHPSRS APFYLGGGSS RDLGDDPLLL QSKPFNGLMQ LQQLHSSAAT ATDLFNLGIL SDSSNRSIAI KPNAHPLISD
301: RLNSTAGGSN EPPTLFAGNL LSNHVHPNMS SSTYDQSVKS DSAPPHMSAT ALLQKAAQMG VTPNRGSGSS LLKGLGSSYS SGKYTSFGAG FDGAEGSSAA
401: AQLQDVMNSL ANGNHMCSST NESELQQNQS GSGMGAPDSL TRDFLGVGGM MRSMGGGMTQ REQHLSGSYG SLH
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.