Factsheet for Os08t0554400-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04118	Canola	nucleus	19.16	88.24
CDY09390	Canola	nucleus	18.8	86.55
KXG25416	Sorghum	nucleus	74.64	73.96
CDY53540	Canola	nucleus	23.72	67.01
Zm00001d031992_P001	Maize	nucleus	73.54	66.61
CDY04117	Canola	nucleus	24.82	63.55
KRG89168	Soybean	nucleus, plastid	34.85	54.89
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	34.31	51.65
Os09t0555700-02	Rice	nucleus	47.81	48.97
GSMUA_Achr4P04310_001	Banana	nucleus	41.06	47.57
Os01t0242200-01	Rice	nucleus	34.85	46.02
KRH49489	Soybean	nucleus, plastid	41.24	42.4
Os04t0566400-02	Rice	nucleus	46.72	41.76
Os02t0672100-01	Rice	nucleus	46.72	41.63
KRH49485	Soybean	nucleus	40.88	41.25
CDY59418	Canola	nucleus	31.02	41.16
Solyc04g008500.2.1	Tomato	nucleus	38.69	41.01
PGSC0003DMT400075837	Potato	nucleus	38.69	40.93
KRG90705	Soybean	nucleus	42.15	40.74
KRH36039	Soybean	nucleus	42.15	40.46
VIT_01s0010g02100.t01	Wine grape	nucleus	42.15	40.38
KRG89167	Soybean	nucleus, plastid	40.33	40.26
CDY17440	Canola	nucleus	34.85	39.96
Os01t0195000-01	Rice	nucleus	35.04	39.43
CDY45271	Canola	nucleus	29.74	39.18
CDY03081	Canola	nucleus	37.41	39.12
CDY17615	Canola	nucleus	37.23	38.71
AT2G02080.3	Thale cress	nucleus, plastid	36.31	38.57
CDX81653	Canola	nucleus	32.85	38.54
CDY15814	Canola	nucleus	33.21	38.48
GSMUA_Achr11P...	Banana	nucleus	37.41	38.46
Bra026819.1-P	Field mustard	nucleus	32.66	38.33
KRH34792	Soybean	nucleus	38.69	38.2
AT1G14580.3	Thale cress	nucleus	33.39	38.05
KRG91985	Soybean	nucleus	38.87	38.04
CDY45270	Canola	nucleus	30.84	37.56
Bra026204.1-P	Field mustard	nucleus, plastid	30.84	37.56
CDY17614	Canola	nucleus, plastid	35.04	37.43
Bra026616.1-P	Field mustard	nucleus	34.85	37.38
Os03t0197800-00	Rice	nucleus	37.59	37.32
Bra024833.1-P	Field mustard	plastid	34.85	37.23
CDY03080	Canola	nucleus, plastid	35.04	37.21
Os01t0935000-01	Rice	nucleus	32.3	37.18
GSMUA_Achr11P...	Banana	nucleus	34.49	36.99
Bra024834.1-P	Field mustard	nucleus, plastid	37.23	36.96
CDY15811	Canola	nucleus	37.96	36.62
CDY09391	Canola	nucleus	37.77	36.51
Os02t0518500-00	Rice	nucleus	32.66	36.38
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	43.43	36.01
Bra026203.1-P	Field mustard	nucleus, plastid	29.93	35.34
Bra026617.1-P	Field mustard	nucleus	37.77	35.08
AT2G02070.2	Thale cress	nucleus	37.96	34.55
Bra040974.1-P	Field mustard	nucleus, plastid	36.5	34.19
Os01t0572300-01	Rice	nucleus	33.21	33.89
Os10t0419200-01	Rice	nucleus	28.47	32.84
Bra023223.1-P	Field mustard	plastid	28.28	32.29
CDY12268	Canola	nucleus	25.18	30.94
CDY68983	Canola	nucleus	20.62	28.9
Os03t0237250-01	Rice	plastid	21.53	26.94
Os07t0581366-00	Rice	cytosol, nucleus	29.93	25.87
Os08t0467100-01	Rice	nucleus	23.36	24.02

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:4346276	EMBL:AK072128	EMBL:AK099830	ProteinID:BAD13075.1
ProteinID:BAD33014.1	ProteinID:BAF24380.1	ProteinID:BAT06628.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0046872	InterPro:IPR013087	EnsemblPlantsGene:Os08g0554400	EnsemblPlants:Os08t0554400-02	PFAM:PF12171	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF66	UniProt:Q6Z3F1	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI000023AD29	RefSeq:XP_015650033.1	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

indeterminate domain 6Zinc finger, C2H2-type domain containing protein. (Os08t0554400-01);Zinc finger, C2H2-type domain containing protein. (Os08t0554400-02)

Coordinates

chr8:-:27733390..27739327

Molecular Weight (calculated)

56666.4 Da

IEP (calculated)

9.385

GRAVY (calculated)

-0.502

Length

548 amino acids

Sequence
(BLAST)

001: MAAASSAHYF GLGEPQMQQQ QQQPPLQNNA AAPVAATPPP KKKRNQPGNP NPDAEVVALS PHTLLATNRF VCEVCNKGFQ REQNLQLHRR GHNLPWKLKQ
101: KNPKETRRRV YLCPEPSCVH HDPSRALGDL TGIKKHYSRK HGEKKWKCDK CNKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAQE
201: SGRIMPPMGA ALYAAAGAGM AIGGLTGMAA SHQLQPFQDH SSAITTAANA AAQFDHLMAT SSAAAGSPAF RAAQPTSSSS SPFYLGGGGD DGQAHTSLLH
301: GKPAFHGLMQ LPEQQGSNGG GLLNLSYFSG GNGGHHHHHQ EGRLVFPDQF NGVAAGNGAR AGSGEHGNSG NNADSGSIFS GNMMGGGGGF SSLYSSSDQT
401: VPPPQMSATA LLQKAAQMGA TTSSGGAGSV NSLLRGLGSG GGGGALNGKP AGAAGFIMSG ESSSRSTASQ TAENESQLRE LMMNTLSATG GGTGAGTVFV
501: GGGFPGVDDG KLSTRDFLGV SGGAPGLQLR HGGAAGMGMA GSLDQEMK

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.