Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04172 | Sorghum | nucleus | 65.76 | 60.19 |
| Zm00001d042202_P001 | Maize | nucleus | 64.08 | 58.1 |
| TraesCS3B01G497200.1 | Wheat | nucleus | 60.5 | 56.36 |
| TraesCS3D01G449900.1 | Wheat | nucleus | 59.87 | 55.99 |
| GSMUA_Achr11P... | Banana | nucleus | 42.23 | 48.55 |
| Os01t0242200-01 | Rice | nucleus | 37.4 | 42.89 |
| PGSC0003DMT400063501 | Potato | nucleus | 27.31 | 36.11 |
| Os01t0195000-01 | Rice | nucleus | 36.13 | 35.32 |
| Solyc01g099340.2.1 | Tomato | nucleus | 31.3 | 35.14 |
| VIT_14s0060g02440.t01 | Wine grape | nucleus, plastid | 37.82 | 33.9 |
| Os01t0572300-01 | Rice | nucleus | 38.24 | 33.89 |
| KRH68532 | Soybean | nucleus | 36.13 | 33.59 |
| KRG96824 | Soybean | nucleus | 35.29 | 33.14 |
| Os10t0419200-01 | Rice | nucleus | 32.98 | 33.05 |
| KRG96409 | Soybean | nucleus | 36.97 | 32.9 |
| KRH33908 | Soybean | nucleus, plastid | 36.76 | 32.77 |
| KRG92880 | Soybean | nucleus | 36.34 | 32.7 |
| Os03t0197800-00 | Rice | nucleus | 37.82 | 32.61 |
| KRH71547 | Soybean | nucleus | 29.62 | 32.41 |
| Os08t0554400-02 | Rice | nucleus | 37.18 | 32.3 |
| KRH68150 | Soybean | nucleus | 30.46 | 32.01 |
| Os09t0555700-02 | Rice | nucleus | 35.71 | 31.78 |
| Os02t0518500-00 | Rice | nucleus | 32.35 | 31.3 |
| Solyc09g074780.2.1 | Tomato | nucleus, plastid | 34.03 | 31.15 |
| PGSC0003DMT400029550 | Potato | nucleus | 29.41 | 30.91 |
| VIT_07s0104g01620.t01 | Wine grape | nucleus | 36.97 | 29.43 |
| Os02t0672100-01 | Rice | nucleus | 37.18 | 28.78 |
| Os04t0566400-02 | Rice | nucleus | 36.55 | 28.39 |
| Os03t0237250-01 | Rice | plastid | 25.0 | 27.17 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 34.24 | 25.71 |
| Os08t0467100-01 | Rice | nucleus | 25.84 | 23.08 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:4326790 | EMBL:AK070390 | ProteinID:BAB64188.1 | ProteinID:BAB93256.1 |
| ProteinID:BAF07231.1 | ProteinID:BAS76080.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| EnsemblPlantsGene:Os01g0935000 | EnsemblPlants:Os01t0935000-01 | PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF44 | UniProt:Q942Y7 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00000ABDDB | RefSeq:XP_015635962.1 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
indeterminate domain 9Zinc finger, C2H2-type domain containing protein. (Os01t0935000-01)
Coordinates
chr1:-:41011330..41015063
Molecular Weight (calculated)
50110.0 Da
IEP (calculated)
7.955
GRAVY (calculated)
-0.265
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEFELQQQP YYSKLLLGSP LEIANVDDSD LQLVAGVPSD PPPAPPTAVK KKKKRSLPGT PDPSAEVVAL SPRTLLATNR FVCEICGKGF QRDQNLQLHR
101: RGHNLPWKLR QRGGAGGGGG GEPPRKRVYV CPEASCVHHS PSRALGDLTG IKKHFCRKHG EKKWKCDRCG KRYAVHSDWK AHSKVCGTRE YKCDCGTVFS
201: RRDSFVTHRA FCDALAQENN KLAQPMNMAA VTSALQGQQQ AHHPVADDDD AAGVKSPHLK MFPDVDNIVA AATAGNPLLP PPLSMAGCML SSLAAPLSSP
301: FLPGCKLGVD AARDAAMVFP PPPPPAGSAA AIMSATALLQ KAAELGATTS TGCYGGVAFP AMGIAGGLDR LPAIGHHLAP YDDVVVPAAL QGQTATQLVG
401: FDLGGLLPGQ LYGGGGGAMT RAIGSLMHGG DQHAGVVDRR RGEGVRVVDY MGVDDDDDHG CFDGVGPFGP HIGPWA
101: RGHNLPWKLR QRGGAGGGGG GEPPRKRVYV CPEASCVHHS PSRALGDLTG IKKHFCRKHG EKKWKCDRCG KRYAVHSDWK AHSKVCGTRE YKCDCGTVFS
201: RRDSFVTHRA FCDALAQENN KLAQPMNMAA VTSALQGQQQ AHHPVADDDD AAGVKSPHLK MFPDVDNIVA AATAGNPLLP PPLSMAGCML SSLAAPLSSP
301: FLPGCKLGVD AARDAAMVFP PPPPPAGSAA AIMSATALLQ KAAELGATTS TGCYGGVAFP AMGIAGGLDR LPAIGHHLAP YDDVVVPAAL QGQTATQLVG
401: FDLGGLLPGQ LYGGGGGAMT RAIGSLMHGG DQHAGVVDRR RGEGVRVVDY MGVDDDDDHG CFDGVGPFGP HIGPWA
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.