Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96409 | Soybean | nucleus | 93.6 | 79.25 |
| KRH71547 | Soybean | nucleus | 65.78 | 68.51 |
| PGSC0003DMT400029550 | Potato | nucleus | 56.73 | 56.73 |
| Solyc09g074780.2.1 | Tomato | nucleus, plastid | 56.95 | 49.62 |
| VIT_07s0104g01620.t01 | Wine grape | nucleus | 63.36 | 47.99 |
| KRH67268 | Soybean | nucleus | 27.59 | 47.89 |
| KRG89168 | Soybean | nucleus, plastid | 29.14 | 37.93 |
| KRH49655 | Soybean | nucleus | 28.48 | 35.64 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 35.1 | 35.57 |
| KRH22332 | Soybean | nucleus | 36.64 | 35.02 |
| KRH61193 | Soybean | nucleus | 36.42 | 34.88 |
| KRH51873 | Soybean | nucleus | 35.98 | 34.75 |
| KRG95590 | Soybean | nucleus | 35.1 | 34.57 |
| KRH15560 | Soybean | nucleus | 31.13 | 34.56 |
| KRH25657 | Soybean | nucleus | 35.76 | 34.39 |
| KRH55868 | Soybean | nucleus | 35.98 | 34.39 |
| KRH71370 | Soybean | nucleus | 34.44 | 34.06 |
| KRH68532 | Soybean | nucleus | 38.41 | 33.98 |
| KRH26995 | Soybean | nucleus | 35.76 | 33.75 |
| KRH32064 | Soybean | nucleus | 34.44 | 33.69 |
| KRH76829 | Soybean | nucleus | 38.41 | 33.66 |
| KRG92880 | Soybean | nucleus | 39.29 | 33.65 |
| KRH05443 | Soybean | nucleus | 32.45 | 33.41 |
| KRG96824 | Soybean | nucleus | 37.31 | 33.33 |
| KRH33908 | Soybean | nucleus, plastid | 39.29 | 33.33 |
| KRH08298 | Soybean | nucleus | 37.53 | 33.27 |
| KRH67672 | Soybean | nucleus | 37.53 | 33.07 |
| KRG95964 | Soybean | nucleus | 37.09 | 32.94 |
| GSMUA_Achr11P... | Banana | nucleus | 30.02 | 32.85 |
| KRH10015 | Soybean | nucleus | 34.44 | 32.84 |
| KRH47108 | Soybean | nucleus | 35.76 | 32.53 |
| KRH23306 | Soybean | nucleus | 34.22 | 32.29 |
| KRH19850 | Soybean | nucleus | 37.09 | 32.0 |
| KRH69942 | Soybean | nucleus | 36.87 | 31.81 |
| KRH69941 | Soybean | nucleus, plastid | 36.87 | 31.81 |
| KRH32442 | Soybean | nucleus | 36.87 | 31.39 |
| KRH44134 | Soybean | nucleus | 35.98 | 30.75 |
| Os01t0935000-01 | Rice | nucleus | 32.01 | 30.46 |
| KRH49485 | Soybean | nucleus | 36.2 | 30.2 |
| EES04172 | Sorghum | nucleus | 34.66 | 30.19 |
| Zm00001d042202_P001 | Maize | nucleus | 34.66 | 29.9 |
| KRG89167 | Soybean | nucleus, plastid | 35.98 | 29.69 |
| KRH49489 | Soybean | nucleus, plastid | 34.88 | 29.64 |
| KRG90705 | Soybean | nucleus | 36.64 | 29.28 |
| KRH24905 | Soybean | nucleus | 34.88 | 29.21 |
| TraesCS3D01G449900.1 | Wheat | nucleus | 32.45 | 28.88 |
| KRH36039 | Soybean | nucleus | 36.2 | 28.72 |
| KRG89014 | Soybean | nucleus | 36.2 | 28.57 |
| TraesCS3B01G497200.1 | Wheat | nucleus | 32.23 | 28.57 |
| KRH34792 | Soybean | nucleus | 34.44 | 28.11 |
| KRH26399 | Soybean | nucleus | 30.68 | 27.8 |
| KRG91985 | Soybean | nucleus | 34.0 | 27.5 |
| KRH22919 | Soybean | nucleus | 30.68 | 27.31 |
| KRH41885 | Soybean | nucleus | 22.74 | 27.11 |
| KRH60588 | Soybean | nucleus | 22.74 | 25.75 |
| KRH58582 | Soybean | nucleus | 22.74 | 23.41 |
| KRH42485 | Soybean | nucleus | 21.85 | 21.9 |
| KRH38986 | Soybean | nucleus | 22.08 | 21.1 |
| KRH48724 | Soybean | nucleus | 21.85 | 20.5 |
Protein Annotations
| EMBL:ACUP02002102 | EnsemblPlants:KRH68150 | EnsemblPlantsGene:GLYMA_03G211700 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF34 |
| PFAM:PF00096 | PFscan:PS50157 | ProteinID:KRH68150 | ProteinID:KRH68150.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0006EDC779 | UniProt:A0A0R0KMN8 | MapMan:15.5.15 | : |
Description
hypothetical protein
Coordinates
chr3:-:41782046..41784954
Molecular Weight (calculated)
49888.8 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.660
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRTSA EVKKRVYVCP EPSCVHHNPA RALGDLTGIK KHYSRKHGEK KWKCDKCSKR YAVQSDWKAH
101: QKTCGTREYK CDCGTIFSRR DSFITHRAFC DALTEENNRV NNQGLTSGMP PNLQSKIPDL MSTMPLTTSP NTTTKFGDYD PKNPLKSLAQ ELVPIPFKPT
201: SMGGGMFSTN AGARFGGPKT MSPSSSSLQL GSSTSSSFNY LQDSKNGGLI AASAQMSATA LLQKAAQMGA TASNSINSPM MQKGFVGGTT TGPDHVSFTT
301: RPPYYGAMLQ HNNSYDHFSP QHDLSNMAGV SGGGAFINQL FHKGQEISQV FDTNTTMNGV GMFSQMPMGS EHNHNQGLMK NVEQEVSNGS SLIHVRDVSD
401: GNHTMQPSRF GGSDMTTVHD FLGIGGSTSR VMNHFHHHFP HEDSAIEEPM WDV
101: QKTCGTREYK CDCGTIFSRR DSFITHRAFC DALTEENNRV NNQGLTSGMP PNLQSKIPDL MSTMPLTTSP NTTTKFGDYD PKNPLKSLAQ ELVPIPFKPT
201: SMGGGMFSTN AGARFGGPKT MSPSSSSLQL GSSTSSSFNY LQDSKNGGLI AASAQMSATA LLQKAAQMGA TASNSINSPM MQKGFVGGTT TGPDHVSFTT
301: RPPYYGAMLQ HNNSYDHFSP QHDLSNMAGV SGGGAFINQL FHKGQEISQV FDTNTTMNGV GMFSQMPMGS EHNHNQGLMK NVEQEVSNGS SLIHVRDVSD
401: GNHTMQPSRF GGSDMTTVHD FLGIGGSTSR VMNHFHHHFP HEDSAIEEPM WDV
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.