CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71370	Soybean	nucleus	89.2	90.17
KRH67268	Soybean	nucleus	45.36	80.46
KRG95590	Soybean	nucleus	69.11	69.57
VIT_00s0179g00170.t01	Wine grape	nucleus, plastid	59.18	61.85
GSMUA_Achr3P25410_001	Banana	nucleus	35.85	50.92
CDX97281	Canola	nucleus, plastid	40.17	48.31
GSMUA_Achr2P08910_001	Banana	nucleus	39.52	47.53
AT4G02670.2	Thale cress	nucleus, plastid	41.04	47.03
Bra018535.1-P	Field mustard	plastid	40.39	46.29
CDX91304	Canola	nucleus, plastid	39.96	45.79
KRG89168	Soybean	nucleus, plastid	33.91	45.11
PGSC0003DMT400049788	Potato	nucleus	44.71	43.4
KRH15560	Soybean	nucleus	38.23	43.38
Solyc09g065670.2.1	Tomato	nucleus	43.2	42.55
KRH10015	Soybean	nucleus	41.9	40.84
KRH23306	Soybean	nucleus	42.12	40.62
KRH05443	Soybean	nucleus	38.44	40.45
KRH47108	Soybean	nucleus	42.76	39.76
KRH51873	Soybean	nucleus	39.74	39.23
TraesCS6B01G154000.1	Wheat	nucleus	34.56	39.12
TraesCS6D01G116300.1	Wheat	nucleus	33.91	38.48
KRH61193	Soybean	nucleus	39.09	38.27
TraesCS6A01G126000.1	Wheat	nucleus	34.13	37.8
KXG38489	Sorghum	nucleus	34.77	37.62
KRH44134	Soybean	nucleus	42.98	37.55
KRH76829	Soybean	nucleus	41.47	37.14
KRH22332	Soybean	nucleus	38.01	37.13
KRH49655	Soybean	nucleus	28.94	37.02
KRH25657	Soybean	nucleus	37.58	36.94
KRH55868	Soybean	nucleus	37.58	36.71
KRH26995	Soybean	nucleus	38.01	36.67
KRG95964	Soybean	nucleus	40.17	36.47
Zm00001d032922_P001	Maize	nucleus	34.34	36.47
KRH19850	Soybean	nucleus	40.82	36.0
KRH67672	Soybean	nucleus	39.74	35.8
KRH32442	Soybean	nucleus	40.82	35.53
KRH69942	Soybean	nucleus	39.96	35.24
KRH69941	Soybean	nucleus, plastid	39.96	35.24
KRH08298	Soybean	nucleus	38.66	35.03
KRH68532	Soybean	nucleus	38.66	34.96
KRH71547	Soybean	nucleus	32.4	34.48
KRH68150	Soybean	nucleus	33.69	34.44
KRG96824	Soybean	nucleus	37.58	34.32
KRH49485	Soybean	nucleus	40.17	34.25
Os10t0419200-01	Rice	nucleus	34.99	34.11
KRG89167	Soybean	nucleus, plastid	40.39	34.06
KRG92880	Soybean	nucleus	38.88	34.03
KRG96409	Soybean	nucleus	39.31	34.02
KRH49489	Soybean	nucleus, plastid	39.09	33.96
KRH33908	Soybean	nucleus, plastid	39.09	33.9
KRG90705	Soybean	nucleus	41.25	33.69
KRH34792	Soybean	nucleus	40.17	33.51
KRH36039	Soybean	nucleus	41.25	33.45
KRG91985	Soybean	nucleus	40.17	33.21
KRH24905	Soybean	nucleus	38.44	32.9
CDY67587	Canola	cytosol, nucleus	15.98	32.89
KRH26399	Soybean	nucleus	34.13	31.6
KRG89014	Soybean	nucleus	38.88	31.36
KRH41885	Soybean	nucleus	25.7	31.32
KRH22919	Soybean	nucleus	34.13	31.04
KRH60588	Soybean	nucleus	26.57	30.75
KRH58582	Soybean	nucleus	26.57	27.95
KRH38986	Soybean	nucleus	27.65	27.0
KRH42485	Soybean	nucleus	26.35	26.99
KRH48724	Soybean	nucleus	27.65	26.5

Protein Annotations

EMBL:ACUP02006094	EnsemblPlants:KRH32064	EnsemblPlantsGene:GLYMA_10G029700	EntrezGene:100812496	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593
PANTHER:PTHR10593:SF65	PFscan:PS50157	ProteinID:KRH32064	ProteinID:KRH32064.1	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233C7F9	UniProt:K7LH38	MapMan:15.5.15	:

Description

hypothetical protein

Coordinates

chr10:+:2587971..2592516

Molecular Weight (calculated)

51753.0 Da

IEP (calculated)

9.641

GRAVY (calculated)

-0.718

Length

463 amino acids

Sequence
(BLAST)

001: MFPAVMSNSN SWSEEATVSC GTRITGLNHV VTTTISPQQP QKIKKKRNLP GNPDPDAEVI ALSPKTLLAT NRFVCEICNK GFQRDQNLQL HRRGHNLPWK
101: LKQRSNKDVK KKAYVCPEPS CVHHNPSRAL GDLTGIKKHY CRKHGEKKWK CEKCSKIYAV QSDWKAHSKT CGTREYRCDC GTLFSRKDSF ITHRAFCDAL
201: AEESARLSAN QLATNTTTNP LVHSLFLLPT QQRNNNNNIN FINPWDPNPN PSNLTTLHNN NIKPESHNFH IPNTSTNNNN NISSSLLHHH QQPNKRIITS
301: PYRDLHVRTQ PHSNAATSAH LSATALLQKA ATVGAAAITG PTLMTQLSMA ELGAVTTQLD SVPMTVPLPP DQRYMNMRGL KNNNNDGLTR DFLGLTNGSA
401: VDVSIDVKDM LTFTAGSIEY NHRHQQQQSY EHHHSHNNLL FKPQQGFGFL GTTTGPESWG NCE

Best Arabidopsis Sequence Match ( AT4G02670.1 )
(BLAST)

001: MFSSHSLSYK LSSLSTEASA SSGNNTLSTI QEFSGFHNVI SSVCTHTETH KPKKKRGLPG NPDPDAEVIA LSPKTLLATN RFVCEICNKG FQRDQNLQLH
101: RRGHNLPWKL KQKNTKEQQK KKVYVCPETN CAHHHPSRAL GDLTGIKKHF CRKHGEKKWK CEKCSKFYAV QSDWKAHTKI CGTRDYRCDC GTLFSRKDTF
201: ITHRAFCDAL AEESARLHST SSSNLTNPNP NFQGHHFMFN KSSSLLFTSS PLFIEPSLST AALSTPPTAA LSATALLQKA TSLSSTTFGG GGQTRSIGHH
301: RHLTNVNEFL GVDRVMMTSA SSSEYDQLVV DGFTSTWQKA DRLTRDFLGL TGHGGHVSVR PGDMLEYAGG VAFPMSAYDT ESHDHSFQKA YDHLGFSGAH
401: RM

Arabidopsis Description

AtIDD12Indeterminate(ID)-domain 12 [Source:UniProtKB/TrEMBL;Acc:A0A1P8B4I0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.