Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51873 | Soybean | nucleus | 90.06 | 90.83 |
| KRH67268 | Soybean | nucleus | 31.92 | 57.85 |
| VIT_18s0001g12220.t01 | Wine grape | nucleus, plastid | 48.63 | 46.37 |
| Solyc04g080130.2.1 | Tomato | nucleus | 46.51 | 43.91 |
| KRG89168 | Soybean | nucleus, plastid | 31.71 | 43.1 |
| PGSC0003DMT400013174 | Potato | nucleus | 46.09 | 43.08 |
| KRH15560 | Soybean | nucleus | 36.79 | 42.65 |
| KRH76829 | Soybean | nucleus | 46.51 | 42.55 |
| KRH08298 | Soybean | nucleus | 45.24 | 41.88 |
| KRH69941 | Soybean | nucleus, plastid | 45.45 | 40.95 |
| KRH69942 | Soybean | nucleus | 45.45 | 40.95 |
| KRH47108 | Soybean | nucleus | 42.49 | 40.36 |
| KRH05443 | Soybean | nucleus | 37.42 | 40.23 |
| KRH23306 | Soybean | nucleus | 40.38 | 39.79 |
| KRH10015 | Soybean | nucleus | 39.32 | 39.16 |
| KRG95590 | Soybean | nucleus | 38.05 | 39.13 |
| KRH32064 | Soybean | nucleus | 38.27 | 39.09 |
| KRH49655 | Soybean | nucleus | 29.81 | 38.95 |
| KRH71370 | Soybean | nucleus | 37.63 | 38.86 |
| KRH25657 | Soybean | nucleus | 37.84 | 38.0 |
| KRH44134 | Soybean | nucleus | 42.49 | 37.92 |
| KRH55868 | Soybean | nucleus | 37.63 | 37.55 |
| KRH22332 | Soybean | nucleus | 37.42 | 37.34 |
| KRH26995 | Soybean | nucleus | 37.63 | 37.08 |
| KRH68532 | Soybean | nucleus | 39.75 | 36.72 |
| KRH71547 | Soybean | nucleus | 33.62 | 36.55 |
| KRH68150 | Soybean | nucleus | 34.88 | 36.42 |
| KRG96824 | Soybean | nucleus | 38.69 | 36.09 |
| KRG92880 | Soybean | nucleus | 39.53 | 35.35 |
| KRG90705 | Soybean | nucleus | 42.07 | 35.1 |
| KRH33908 | Soybean | nucleus, plastid | 39.53 | 35.02 |
| KRH19850 | Soybean | nucleus | 38.69 | 34.86 |
| KRG96409 | Soybean | nucleus | 39.32 | 34.77 |
| KRH36039 | Soybean | nucleus | 41.86 | 34.68 |
| KRH32442 | Soybean | nucleus | 38.9 | 34.59 |
| KRG95964 | Soybean | nucleus | 37.21 | 34.51 |
| KRH67672 | Soybean | nucleus | 37.21 | 34.24 |
| KRH24905 | Soybean | nucleus | 38.27 | 33.46 |
| KRH41885 | Soybean | nucleus | 26.85 | 33.42 |
| KRH49489 | Soybean | nucleus, plastid | 37.63 | 33.4 |
| KRH49485 | Soybean | nucleus | 37.84 | 32.97 |
| KRG89167 | Soybean | nucleus, plastid | 38.05 | 32.79 |
| KRG89014 | Soybean | nucleus | 39.11 | 32.23 |
| KRH60588 | Soybean | nucleus | 27.06 | 32.0 |
| KRH26399 | Soybean | nucleus | 33.83 | 32.0 |
| KRH22919 | Soybean | nucleus | 34.25 | 31.83 |
| KRG91985 | Soybean | nucleus | 37.63 | 31.79 |
| KRH34792 | Soybean | nucleus | 37.0 | 31.53 |
| KRH58582 | Soybean | nucleus | 27.48 | 29.55 |
| KRH38986 | Soybean | nucleus | 28.33 | 28.27 |
| KRH42485 | Soybean | nucleus | 26.85 | 28.1 |
| KRH48724 | Soybean | nucleus | 27.7 | 27.12 |
Protein Annotations
| EntrezGene:100800089 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02002158 | EnsemblPlantsGene:GLYMA_04G033300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1JTC7 | InterPro:IPR013087 | EnsemblPlants:KRH61193 | ProteinID:KRH61193 |
| ProteinID:KRH61193.1 | PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF100 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002339389 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:2649625..2652945
Molecular Weight (calculated)
50369.5 Da
IEP (calculated)
9.266
GRAVY (calculated)
-0.466
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEPQNPSPL THSPALEITP QPLLPPKRKR SLPGMPDPDA EVIALSPKTL LATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRGST EPRKKAYVCP
101: EPSCVHHNPA RALGDLTGIK KHFCRKHGEK KWQCERCSKK YAVHSDWKAH MKTCGSREYR CDCGTLFSRR DSFITHRAFC DVLAQESARA QAQAQGQGGS
201: NSKVVEASSP PTPPLTPSAS VVPPTLSIQS SEIPENPSTK LSPTSPNATA CFVTSSSSTP SNSTTCTTVF ASVLAPSPTT PSTPQSPSNS TSSFTNLISN
301: LARSQNPNTI MRESTSLSLS TPLYLSNNDP LHYTASPQPA LSATALLQKA AQMGASNASL LRGLGLATTT SSSSSFGKDE GFNINATTTL QWNGQVKQEN
401: HPVVDNLGLG LLCGSGSVPD VMMAPSTPFV GQPMTRDLLG LSIGGGGSRG GLSALLTSFG GNFDSPGEGG VHR
101: EPSCVHHNPA RALGDLTGIK KHFCRKHGEK KWQCERCSKK YAVHSDWKAH MKTCGSREYR CDCGTLFSRR DSFITHRAFC DVLAQESARA QAQAQGQGGS
201: NSKVVEASSP PTPPLTPSAS VVPPTLSIQS SEIPENPSTK LSPTSPNATA CFVTSSSSTP SNSTTCTTVF ASVLAPSPTT PSTPQSPSNS TSSFTNLISN
301: LARSQNPNTI MRESTSLSLS TPLYLSNNDP LHYTASPQPA LSATALLQKA AQMGASNASL LRGLGLATTT SSSSSFGKDE GFNINATTTL QWNGQVKQEN
401: HPVVDNLGLG LLCGSGSVPD VMMAPSTPFV GQPMTRDLLG LSIGGGGSRG GLSALLTSFG GNFDSPGEGG VHR
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.