CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04118	Canola	nucleus	31.32	91.6
CDY09390	Canola	nucleus	30.75	89.92
CDY53540	Canola	nucleus	39.66	71.13
CDY04117	Canola	nucleus	42.24	68.69
KRH49489	Soybean	nucleus, plastid	92.82	60.6
KRH67268	Soybean	nucleus	41.09	54.79
KRG90705	Soybean	nucleus	77.59	47.62
KRH36039	Soybean	nucleus	77.01	46.94
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	45.98	43.96
VIT_01s0010g02100.t01	Wine grape	nucleus	71.84	43.71
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	47.7	41.71
GSMUA_Achr9P23870_001	Banana	nucleus	51.15	41.01
KRH49485	Soybean	nucleus	63.22	40.52
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	56.32	40.0
GSMUA_Achr3P13990_001	Banana	nucleus	48.85	39.91
KRG89167	Soybean	nucleus, plastid	62.93	39.89
KRH34792	Soybean	nucleus	61.78	38.74
KRG91985	Soybean	nucleus	62.07	38.57
GSMUA_Achr1P17940_001	Banana	nucleus	51.44	38.33
GSMUA_Achr4P04310_001	Banana	nucleus	51.72	38.05
KRH15560	Soybean	nucleus	44.25	37.75
CDY45271	Canola	nucleus	45.11	37.74
PGSC0003DMT400075837	Potato	nucleus	56.03	37.64
GSMUA_Achr1P07110_001	Banana	nucleus	52.01	37.24
Os09t0555700-02	Rice	nucleus	57.18	37.2
Zm00001d021403_P001	Maize	nucleus	51.44	36.98
Solyc04g008500.2.1	Tomato	nucleus	54.89	36.94
CDY59418	Canola	nucleus	43.68	36.8
OQU89911	Sorghum	nucleus, plastid	56.32	36.77
GSMUA_Achr1P02080_001	Banana	nucleus	56.9	36.2
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	50.86	36.2
TraesCS5A01G356100.1	Wheat	nucleus, plastid	56.32	35.96
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	67.82	35.7
TraesCS5B01G358600.1	Wheat	nucleus, plastid	55.75	35.53
Bra026819.1-P	Field mustard	nucleus	47.41	35.33
TraesCS5D01G364900.1	Wheat	nucleus, plastid	55.46	35.28
KXG25416	Sorghum	nucleus	56.03	35.26
KRH05443	Soybean	nucleus	44.54	35.23
CDX81653	Canola	nucleus	47.13	35.12
CDY45270	Canola	nucleus	45.4	35.11
Bra026204.1-P	Field mustard	nucleus, plastid	45.11	34.89
GSMUA_Achr10P...	Banana	nucleus	47.99	34.86
Os08t0554400-02	Rice	nucleus	54.89	34.85
AT1G14580.3	Thale cress	nucleus	47.13	34.1
TraesCS6A01G254500.1	Wheat	nucleus	56.32	33.91
KRH32064	Soybean	nucleus	45.11	33.91
TraesCS6B01G271000.1	Wheat	nucleus	56.03	33.85
KRH71370	Soybean	nucleus	44.54	33.84
Bra026203.1-P	Field mustard	nucleus, plastid	45.11	33.84
CDY15814	Canola	nucleus	45.98	33.83
TraesCS6D01G235800.1	Wheat	nucleus	56.03	33.74
KRH22332	Soybean	nucleus	45.69	33.54
KRH10015	Soybean	nucleus	45.69	33.47
KRG95590	Soybean	nucleus	43.97	33.26
KRH47108	Soybean	nucleus	47.41	33.13
KRH23306	Soybean	nucleus	45.69	33.12
KRH25657	Soybean	nucleus	44.83	33.12
GSMUA_Achr11P...	Banana	nucleus	50.57	33.02
TraesCS2B01G421100.1	Wheat	nucleus	58.05	33.01
KRH26995	Soybean	nucleus	45.4	32.92
KRH55868	Soybean	nucleus	44.83	32.91
EES11271	Sorghum	nucleus	56.61	32.89
CDY17440	Canola	nucleus	45.11	32.85
Os04t0566400-02	Rice	nucleus	57.76	32.79
CDY17615	Canola	nucleus	49.43	32.64
CDY03081	Canola	nucleus	49.14	32.63
KRH51873	Soybean	nucleus	43.97	32.62
Zm00001d026113_P006	Maize	nucleus	56.03	32.55
Zm00001d017560_P001	Maize	nucleus	54.31	32.47
AT2G02080.3	Thale cress	nucleus, plastid	47.7	32.17
KRH49655	Soybean	nucleus	33.33	32.04
GSMUA_Achr4P05240_001	Banana	nucleus	45.98	32.0
Zm00001d031992_P001	Maize	nucleus	55.46	31.9
Os02t0672100-01	Rice	nucleus	56.32	31.87
KRH61193	Soybean	nucleus	43.1	31.71
KXG31026	Sorghum	nucleus	54.02	31.6
CDY17614	Canola	nucleus, plastid	46.55	31.58
Bra026616.1-P	Field mustard	nucleus	46.26	31.51
GSMUA_Achr11P...	Banana	nucleus	51.15	31.45
KRH19850	Soybean	nucleus	47.41	31.43
Bra024833.1-P	Field mustard	plastid	46.26	31.38
KRH67672	Soybean	nucleus	46.26	31.32
CDY03080	Canola	nucleus, plastid	46.26	31.2
KRG95964	Soybean	nucleus	45.69	31.18
Bra024834.1-P	Field mustard	nucleus, plastid	49.43	31.16
KRH44134	Soybean	nucleus	47.41	31.13
CDY09391	Canola	nucleus	50.57	31.04
CDY15811	Canola	nucleus	50.57	30.99
Bra023223.1-P	Field mustard	plastid	42.53	30.83
KRH32442	Soybean	nucleus	47.13	30.83
Zm00001d002654_P003	Maize	nucleus	56.03	30.81
KRH76829	Soybean	nucleus	45.69	30.75
GSMUA_Achr11P...	Banana	nucleus	45.11	30.72
TraesCS2D01G400300.2	Wheat	nucleus	58.05	30.51
Bra040974.1-P	Field mustard	nucleus, plastid	51.15	30.43
KRH26399	Soybean	nucleus	43.68	30.4
TraesCS2A01G403200.2	Wheat	nucleus	57.76	30.32
KXG36163	Sorghum	nucleus	50.57	30.24
Bra026617.1-P	Field mustard	nucleus	50.57	29.83
KRH22919	Soybean	nucleus	43.39	29.67
KRH71547	Soybean	nucleus	37.07	29.66
KRG92880	Soybean	nucleus	44.83	29.49
AT2G02070.2	Thale cress	nucleus	50.86	29.4
KRH24905	Soybean	nucleus	45.69	29.39
KRG96409	Soybean	nucleus	45.11	29.35
KRH33908	Soybean	nucleus, plastid	44.83	29.21
KRH68150	Soybean	nucleus	37.93	29.14
KRH68532	Soybean	nucleus	42.24	28.71
CDY12268	Canola	nucleus	36.78	28.7
KRG96824	Soybean	nucleus	41.67	28.6
KRH69941	Soybean	nucleus, plastid	42.82	28.38
KRH69942	Soybean	nucleus	42.82	28.38
KRH08298	Soybean	nucleus	41.67	28.38
Zm00001d006319_P001	Maize	nucleus	44.83	27.91
KRG89014	Soybean	nucleus	45.98	27.87
KRH41885	Soybean	nucleus	30.17	27.63
CDY68983	Canola	nucleus	29.31	26.09
KRH60588	Soybean	nucleus	29.6	25.75
KRH58582	Soybean	nucleus	31.03	24.55
KRH42485	Soybean	nucleus	31.61	24.34
KRH38986	Soybean	nucleus	31.61	23.21
KRH48724	Soybean	nucleus	31.32	22.57

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02012190	EnsemblPlantsGene:GLYMA_20G005900	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0046872	UniProt:I1ND00	InterPro:IPR013087	EnsemblPlants:KRG89168	ProteinID:KRG89168
ProteinID:KRG89168.1	ProteinID:KRG89169.1	PFAM:PF12171	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593
PANTHER:PTHR10593:SF50	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00023DE6A9	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:573930..581981

Molecular Weight (calculated)

39100.0 Da

IEP (calculated)

9.943

GRAVY (calculated)

-0.887

Length

348 amino acids

Sequence
(BLAST)

001: MAAPFSAASL FAIREEDQNQ MKQQHSSTPS SSTTPAAPPP QKKRRNQPGT PYPDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK
101: QKTNKEPKRK VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG REYRCDCGTL FSRRDSFITH RAFCDALAQE
201: SAREAPNLSS AIGNQLYGNS NNMSLGLSQI PSIHDQNPQP SELMRFSGAP RAGQFDHILP PNIASSSPFR HSMQTPPFFL QESNQTYHDS NKPFQGLIQL
301: SDLNNNNPSA SNLFNLPFLS NRAINSNNYS EEHNSTLLKG PISSQKAP

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.