Factsheet for Bra026819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53540	Canola	nucleus	41.33	99.48
CDY59418	Canola	nucleus	87.58	99.03
CDX81653	Canola	nucleus	97.64	97.64
AT1G14580.3	Thale cress	nucleus	81.16	78.79
Bra036013.1-P	Field mustard	nucleus	22.7	67.09
Bra024833.1-P	Field mustard	plastid	65.1	59.26
Bra026616.1-P	Field mustard	nucleus	63.38	57.93
KRG89168	Soybean	nucleus, plastid	35.33	47.41
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	34.26	43.96
Bra026204.1-P	Field mustard	nucleus, plastid	37.9	39.33
GSMUA_Achr3P13990_001	Banana	nucleus	35.76	39.2
Bra026617.1-P	Field mustard	nucleus	48.61	38.47
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	32.76	38.44
Bra024834.1-P	Field mustard	nucleus, plastid	45.4	38.41
Bra040974.1-P	Field mustard	nucleus, plastid	47.75	38.12
Bra033724.1-P	Field mustard	nucleus	37.69	37.93
Bra026203.1-P	Field mustard	nucleus, plastid	37.05	37.28
GSMUA_Achr1P17940_001	Banana	nucleus	37.26	37.26
GSMUA_Achr1P07110_001	Banana	nucleus	38.76	37.24
Bra018535.1-P	Field mustard	plastid	32.12	37.13
Bra036098.1-P	Field mustard	nucleus, plastid	34.48	36.93
Bra032541.1-P	Field mustard	nucleus	37.47	35.71
GSMUA_Achr10P...	Banana	nucleus	36.4	35.49
Bra030886.1-P	Field mustard	nucleus	33.19	35.47
Bra033840.1-P	Field mustard	nucleus	34.26	35.32
Bra005741.1-P	Field mustard	nucleus	38.12	35.32
KRH49489	Soybean	nucleus, plastid	40.26	35.27
Bra015271.1-P	Field mustard	nucleus	36.19	35.06
GSMUA_Achr9P23870_001	Banana	nucleus	32.55	35.02
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	35.97	34.29
KRH49485	Soybean	nucleus	39.61	34.07
GSMUA_Achr4P04310_001	Banana	nucleus	34.48	34.04
Bra009549.1-P	Field mustard	nucleus	37.47	33.91
KRG90705	Soybean	nucleus	40.9	33.69
Os09t0555700-02	Rice	nucleus	38.54	33.64
PGSC0003DMT400075837	Potato	nucleus	37.26	33.59
Bra037151.1-P	Field mustard	nucleus	35.12	33.33
KRH36039	Soybean	nucleus	40.69	33.27
Bra023223.1-P	Field mustard	plastid	34.05	33.12
Solyc04g008500.2.1	Tomato	nucleus	36.62	33.08
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	34.48	32.92
KRG89167	Soybean	nucleus, plastid	38.54	32.79
Bra027394.1-P	Field mustard	nucleus	35.33	32.67
Os08t0554400-02	Rice	nucleus	38.33	32.66
GSMUA_Achr11P...	Banana	nucleus	37.05	32.46
KRH34792	Soybean	nucleus	38.54	32.43
GSMUA_Achr4P05240_001	Banana	nucleus	34.69	32.4
Bra021510.1-P	Field mustard	nucleus	35.33	32.35
VIT_01s0010g02100.t01	Wine grape	nucleus	39.61	32.34
TraesCS5B01G358600.1	Wheat	nucleus, plastid	37.69	32.23
KRG91985	Soybean	nucleus	38.54	32.14
TraesCS5A01G356100.1	Wheat	nucleus, plastid	37.47	32.11
Zm00001d021403_P001	Maize	nucleus	33.19	32.02
KXG25416	Sorghum	nucleus	37.9	32.01
TraesCS5D01G364900.1	Wheat	nucleus, plastid	37.47	31.99
OQU89911	Sorghum	nucleus, plastid	35.97	31.52
GSMUA_Achr11P...	Banana	nucleus	34.05	31.12
GSMUA_Achr1P02080_001	Banana	nucleus	36.4	31.08
EES11271	Sorghum	nucleus	39.4	30.72
Bra001523.1-P	Field mustard	nucleus	33.62	30.66
KXG31026	Sorghum	nucleus	38.76	30.42
Zm00001d026113_P006	Maize	nucleus	38.97	30.38
Os02t0672100-01	Rice	nucleus	39.83	30.24
Zm00001d017560_P001	Maize	nucleus	37.69	30.24
TraesCS2B01G421100.1	Wheat	nucleus	39.4	30.07
Os04t0566400-02	Rice	nucleus	39.4	30.02
TraesCS6D01G235800.1	Wheat	nucleus	37.05	29.93
TraesCS6A01G254500.1	Wheat	nucleus	37.05	29.93
TraesCS6B01G271000.1	Wheat	nucleus	36.83	29.86
GSMUA_Achr11P...	Banana	nucleus	35.97	29.68
Zm00001d002654_P003	Maize	nucleus	39.19	28.91
Zm00001d031992_P001	Maize	nucleus	37.26	28.76
TraesCS2A01G403200.2	Wheat	nucleus	39.61	27.9
TraesCS2D01G400300.2	Wheat	nucleus	39.4	27.79
Bra010981.1-P	Field mustard	nucleus	22.48	27.78
Bra024771.1-P	Field mustard	nucleus	21.2	25.85
KXG36163	Sorghum	nucleus	31.91	25.6
Zm00001d006319_P001	Maize	nucleus	30.19	25.22
Bra004050.1-P	Field mustard	nucleus	21.84	24.7
Bra026624.1-P	Field mustard	nucleus	22.91	24.43
Bra024841.1-P	Field mustard	nucleus	23.13	24.32
Bra004283.1-P	Field mustard	nucleus	21.41	24.27
Bra017432.1-P	Field mustard	nucleus	22.7	24.09
Bra038293.1-P	Field mustard	nucleus	32.98	17.38

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EnsemblPlantsGene:Bra026819	EnsemblPlants:Bra026819.1	EnsemblPlants:Bra026819.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:M4EDF9	PFAM:PF00096
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF66	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI0002542D95	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

AT1G14580 (E=2e-202) | zinc finger (C2H2 type) family protein

Coordinates

chrA09:-:33866648..33869358

Molecular Weight (calculated)

51308.7 Da

IEP (calculated)

9.107

GRAVY (calculated)

-0.710

Length

467 amino acids

Sequence
(BLAST)

001: MSSSYNNTIS SSSTQSFLLS SAATGSNNFN REETAMTMIQ QPNSVAPPPP PKKRRNQPGN SYPDAEVIAL SPKTIMATNR FLCEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSNKEVRRK VYICPEPTCV HHDPSRALGD LTGIKKHYYR KHGEKKWNCE KCSKRYAVQS DWKAHSKICG TKEYRCDCGT IFSRRDSYIT
201: HRAFCDALIQ ESARNPTVSF TAIAAASGGG GRHGFYDGAS SALSHNHFGN NSNTGFTPLA AGYNLNRSSS EKFEDFIPQP TNPYHGPNNF LMQCSSNQGL
301: LAHNDQSLLN QHGMISLGDT ISNNNNNLFN LGNFQLNIKN SDQISAPSLF ADGAENNDPS ALLRGLTSSS SSSAVVNEFG DNVNGNLHGL MNSLATTTDQ
401: QGRSGSSIFD LHFGNNLSMG GSDRLTLDFL GVNGRVMSNV NGRGGRNQAP LDTEMKFSQP NHPFERA

Best Arabidopsis Sequence Match ( AT1G14580.1 )
(BLAST)

001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA

Arabidopsis Description

C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.