Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 17.69 | 89.92 |
| KXG25416 | Sorghum | nucleus | 82.15 | 89.87 |
| CDY09390 | Canola | nucleus | 17.36 | 88.24 |
| Os08t0554400-02 | Rice | nucleus | 66.61 | 73.54 |
| CDY04117 | Canola | nucleus | 23.64 | 66.82 |
| CDY53540 | Canola | nucleus | 21.32 | 66.49 |
| KRG89168 | Soybean | nucleus, plastid | 31.9 | 55.46 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.91 | 51.37 |
| Zm00001d039254_P001 | Maize | nucleus | 27.93 | 47.74 |
| Zm00001d021403_P001 | Maize | nucleus | 37.36 | 46.69 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 36.36 | 46.51 |
| KRH49489 | Soybean | nucleus, plastid | 37.85 | 42.96 |
| Zm00001d017560_P001 | Maize | nucleus | 40.99 | 42.61 |
| KRG90705 | Soybean | nucleus | 39.17 | 41.8 |
| Zm00001d026113_P006 | Maize | nucleus | 41.32 | 41.74 |
| KRH49485 | Soybean | nucleus | 37.36 | 41.62 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 39.34 | 41.61 |
| KRH36039 | Soybean | nucleus | 39.01 | 41.33 |
| Zm00001d008842_P001 | Maize | nucleus | 31.9 | 41.33 |
| PGSC0003DMT400075837 | Potato | nucleus | 35.21 | 41.12 |
| KRG89167 | Soybean | nucleus, plastid | 36.86 | 40.62 |
| Zm00001d009030_P002 | Maize | nucleus | 29.92 | 40.49 |
| CDY59418 | Canola | nucleus | 27.6 | 40.44 |
| Solyc04g008500.2.1 | Tomato | nucleus | 34.55 | 40.43 |
| Zm00001d002654_P003 | Maize | nucleus | 41.98 | 40.13 |
| KRH34792 | Soybean | nucleus | 36.36 | 39.64 |
| KRG91985 | Soybean | nucleus | 36.53 | 39.46 |
| Zm00001d039467_P001 | Maize | nucleus | 32.4 | 39.44 |
| CDY17440 | Canola | nucleus | 31.07 | 39.33 |
| CDY45271 | Canola | nucleus | 26.94 | 39.18 |
| CDY03081 | Canola | nucleus | 33.72 | 38.93 |
| GSMUA_Achr11P... | Banana | nucleus | 34.21 | 38.84 |
| CDY17615 | Canola | nucleus | 33.55 | 38.52 |
| Zm00001d011223_P002 | Maize | nucleus | 29.42 | 38.03 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 32.4 | 37.98 |
| CDX81653 | Canola | nucleus | 28.93 | 37.47 |
| AT1G14580.3 | Thale cress | nucleus | 29.75 | 37.42 |
| Bra026819.1-P | Field mustard | nucleus | 28.76 | 37.26 |
| CDY15814 | Canola | nucleus | 29.09 | 37.21 |
| GSMUA_Achr11P... | Banana | nucleus | 31.41 | 37.18 |
| CDY45270 | Canola | nucleus | 27.6 | 37.11 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 27.6 | 37.11 |
| Bra024833.1-P | Field mustard | plastid | 31.41 | 37.04 |
| CDY17614 | Canola | nucleus, plastid | 31.41 | 37.04 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 40.33 | 36.91 |
| Zm00001d044261_P001 | Maize | nucleus | 29.26 | 36.88 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 33.55 | 36.78 |
| CDY09391 | Canola | nucleus | 34.38 | 36.68 |
| CDY03080 | Canola | nucleus, plastid | 31.24 | 36.63 |
| Bra026616.1-P | Field mustard | nucleus | 30.91 | 36.59 |
| CDY15811 | Canola | nucleus | 34.21 | 36.44 |
| Zm00001d028139_P001 | Maize | nucleus | 32.23 | 36.18 |
| Zm00001d006319_P001 | Maize | nucleus | 32.73 | 35.42 |
| Bra026617.1-P | Field mustard | nucleus | 34.38 | 35.25 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 26.94 | 35.13 |
| Zm00001d032922_P001 | Maize | nucleus | 25.29 | 35.09 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 33.39 | 34.53 |
| AT2G02070.2 | Thale cress | nucleus | 33.88 | 34.05 |
| Zm00001d016632_P001 | Maize | nucleus | 27.93 | 33.27 |
| Zm00001d042202_P001 | Maize | nucleus | 28.43 | 32.76 |
| Bra023223.1-P | Field mustard | plastid | 25.79 | 32.5 |
| CDY12268 | Canola | nucleus | 22.48 | 30.49 |
| CDY68983 | Canola | nucleus | 19.01 | 29.41 |
| Zm00001d005871_P002 | Maize | nucleus | 20.17 | 27.66 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 18.68 | 25.22 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 18.84 | 25.22 |
| Zm00001d020683_P001 | Maize | nucleus | 20.17 | 24.55 |
| Zm00001d031759_P001 | Maize | nucleus | 20.99 | 24.52 |
| Zm00001d006682_P001 | Maize | nucleus | 29.09 | 23.72 |
| Zm00001d021932_P001 | Maize | nucleus | 28.93 | 21.47 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:542697 | UniProt:A0A1D6KMW5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013087 | ProteinID:ONM04177.1 | PFAM:PF12171 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0008423EF6 |
| EnsemblPlantsGene:Zm00001d031992 | EnsemblPlants:Zm00001d031992_P001 | EnsemblPlants:Zm00001d031992_T001 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
indeterminate domain p1 indeterminate domain p1
Coordinates
chr1:+:208942917..208950782
Molecular Weight (calculated)
63820.3 Da
IEP (calculated)
9.494
GRAVY (calculated)
-0.444
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMPSTIATR HEVMRIVTIL TQAAQDFRML IVKLARYSVV VVVVGRTPEE GAREEYRTAA SNMAAASSAH LFGLGDGQMQ MQPQQQQAPP PPLVNNPAAP
101: PPKKKRNQPA DPDAEVIALS PKTLMATNRF VCEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KNPKETRRRV YLCPEPTCVH HDPSRALGDL TGIKKHYCRK
201: HGEKKWKCDK CNKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAQE SARVPPMGAG MYGTGGMALG LSGMATSQLQ SFQDQTHSSA
301: TTAISNNPTA QFEHLMQSST GSPVFRGAQP TSSSSSPFYL GGAEDGHQSL SGHTSLLHGN KQAYHGLMLL PEQQHQAGSN GLLNLGFFSG GSSGQDARLV
401: FPDQFNGAVG GNVRGDGSEH GNSGANTESA AIFSGNLMGN HQMASSAGFS SSLYNSSETA APAQMSATAL LQKAAQMGAT TSSGNVNSLL RGLGSSAGGT
501: LNGRPAGAAA GFMAGESSSA RSTSQAENES QFRDLMNTLA ASGSGAAGTA FSGGFPGMDD SKLSTRDFLG VGGSVVRSMG GAAGLPLRHG GAAGIGMGSL
601: DTEMK
101: PPKKKRNQPA DPDAEVIALS PKTLMATNRF VCEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KNPKETRRRV YLCPEPTCVH HDPSRALGDL TGIKKHYCRK
201: HGEKKWKCDK CNKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAQE SARVPPMGAG MYGTGGMALG LSGMATSQLQ SFQDQTHSSA
301: TTAISNNPTA QFEHLMQSST GSPVFRGAQP TSSSSSPFYL GGAEDGHQSL SGHTSLLHGN KQAYHGLMLL PEQQHQAGSN GLLNLGFFSG GSSGQDARLV
401: FPDQFNGAVG GNVRGDGSEH GNSGANTESA AIFSGNLMGN HQMASSAGFS SSLYNSSETA APAQMSATAL LQKAAQMGAT TSSGNVNSLL RGLGSSAGGT
501: LNGRPAGAAA GFMAGESSSA RSTSQAENES QFRDLMNTLA ASGSGAAGTA FSGGFPGMDD SKLSTRDFLG VGGSVVRSMG GAAGLPLRHG GAAGIGMGSL
601: DTEMK
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.