Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039467_P001 | Maize | nucleus | 91.43 | 85.92 |
| EES02307 | Sorghum | nucleus | 90.15 | 84.54 |
| Os01t0195000-01 | Rice | nucleus | 72.81 | 69.82 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 71.31 | 68.24 |
| TraesCS3B01G123600.1 | Wheat | nucleus | 72.38 | 68.01 |
| TraesCS3A01G105100.1 | Wheat | nucleus | 71.95 | 67.74 |
| CDY70142 | Canola | nucleus | 22.06 | 56.59 |
| Zm00001d039254_P001 | Maize | nucleus | 36.4 | 48.02 |
| KRH47108 | Soybean | nucleus | 45.18 | 42.37 |
| KRH10015 | Soybean | nucleus | 41.97 | 41.26 |
| KRH23306 | Soybean | nucleus | 42.4 | 41.25 |
| Zm00001d011223_P002 | Maize | nucleus | 41.33 | 41.24 |
| Zm00001d044261_P001 | Maize | nucleus | 41.76 | 40.62 |
| Bra030886.1-P | Field mustard | nucleus | 37.69 | 40.27 |
| Zm00001d009030_P002 | Maize | nucleus | 38.33 | 40.04 |
| KRH44134 | Soybean | nucleus | 44.97 | 39.62 |
| AT1G55110.2 | Thale cress | nucleus | 38.54 | 39.56 |
| VIT_09s0002g02300.t01 | Wine grape | nucleus | 44.54 | 39.1 |
| PGSC0003DMT400012504 | Potato | nucleus | 39.83 | 37.05 |
| PGSC0003DMT400006385 | Potato | nucleus | 42.61 | 36.78 |
| Solyc06g062670.2.1 | Tomato | nucleus | 39.61 | 36.78 |
| Solyc03g121660.2.1 | Tomato | nucleus | 42.61 | 36.72 |
| Zm00001d032922_P001 | Maize | nucleus | 34.05 | 36.47 |
| Zm00001d021403_P001 | Maize | nucleus | 37.26 | 35.95 |
| Zm00001d028139_P001 | Maize | nucleus | 40.47 | 35.06 |
| Zm00001d042202_P001 | Maize | nucleus | 37.9 | 33.71 |
| Zm00001d016632_P001 | Maize | nucleus | 36.62 | 33.66 |
| Zm00001d026113_P006 | Maize | nucleus | 41.11 | 32.05 |
| Zm00001d031992_P001 | Maize | nucleus | 41.33 | 31.9 |
| Zm00001d017560_P001 | Maize | nucleus | 38.97 | 31.27 |
| Zm00001d002654_P003 | Maize | nucleus | 41.11 | 30.33 |
| Zm00001d006319_P001 | Maize | nucleus | 34.26 | 28.62 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 27.19 | 28.35 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 27.19 | 28.1 |
| Zm00001d005871_P002 | Maize | nucleus | 26.34 | 27.89 |
| CDY70938 | Canola | cytosol, nucleus | 15.85 | 27.11 |
| Zm00001d020683_P001 | Maize | nucleus | 26.77 | 25.15 |
| Zm00001d031759_P001 | Maize | nucleus | 26.34 | 23.75 |
| Zm00001d006682_P001 | Maize | nucleus | 37.69 | 23.72 |
| Zm00001d021932_P001 | Maize | nucleus | 36.62 | 20.98 |
Protein Annotations
| EnsemblPlants:Zm00001d008842_P001 | EnsemblPlants:Zm00001d008842_T001 | EnsemblPlantsGene:Zm00001d008842 | EntrezGene:103634926 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF49 | PFscan:PS50157 | ProteinID:AQK90870.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004DEC300 | UniProt:A0A1D6FG97 | MapMan:15.5.15 | : | : |
Description
Protein indeterminate-domain 11
Coordinates
chr8:-:22389776..22391675
Molecular Weight (calculated)
49544.0 Da
IEP (calculated)
8.287
GRAVY (calculated)
-0.500
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLKDLAAIQ HQQQQLAADE NMSNLTSASG DLQASVSSHP APPPAKKKRS LPGNPDPDAE VIALSPRTLM ATNRYVCEVC GKGFQRDQNL QLHRRGHNLP
101: WKLKQRNPKE AVRKKAYVCP EPGCVHHDPA RALGDLTGIK KHFSRKHGEK KWKCDRCAKR YAVHSDWKAH SKVCGTREYR CDCGTHFSRR DSFITHRAFC
201: DALAEESARA VTAAAAVVVG QQQAAGGGDG SAGLHLPPDV LDPSQTLGGG HGMSLQELCL KREQQQQFAP SSWLTAHHQQ ELPGSARLLE QHEYIGSSTP
301: ESTAGLSGFV GLSPSAAGEA AASAHMSATA LLQKAAQMGA TLSRPSNQEQ MASTHSHSST TNAGTGSASA AAAAAINVPG TGAGAFGFGA PHHFGAEERT
401: TTSADRDACG NAAAVSVVGA NDGFTRDFLG LRAFSHGDIL TMAGFDPCMS SAAYEQGHHQ SSKQWHV
101: WKLKQRNPKE AVRKKAYVCP EPGCVHHDPA RALGDLTGIK KHFSRKHGEK KWKCDRCAKR YAVHSDWKAH SKVCGTREYR CDCGTHFSRR DSFITHRAFC
201: DALAEESARA VTAAAAVVVG QQQAAGGGDG SAGLHLPPDV LDPSQTLGGG HGMSLQELCL KREQQQQFAP SSWLTAHHQQ ELPGSARLLE QHEYIGSSTP
301: ESTAGLSGFV GLSPSAAGEA AASAHMSATA LLQKAAQMGA TLSRPSNQEQ MASTHSHSST TNAGTGSASA AAAAAINVPG TGAGAFGFGA PHHFGAEERT
401: TTSADRDACG NAAAVSVVGA NDGFTRDFLG LRAFSHGDIL TMAGFDPCMS SAAYEQGHHQ SSKQWHV
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.