Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10015 | Soybean | nucleus | 81.25 | 82.11 |
| KRH47108 | Soybean | nucleus | 66.88 | 64.46 |
| CDY70142 | Canola | nucleus | 23.33 | 61.54 |
| KRH44134 | Soybean | nucleus | 67.71 | 61.32 |
| KRH67268 | Soybean | nucleus | 33.33 | 61.3 |
| VIT_09s0002g02300.t01 | Wine grape | nucleus | 62.08 | 56.02 |
| Solyc03g121660.2.1 | Tomato | nucleus | 58.75 | 52.03 |
| PGSC0003DMT400006385 | Potato | nucleus | 58.54 | 51.94 |
| KRH15560 | Soybean | nucleus | 39.58 | 46.57 |
| KRG89168 | Soybean | nucleus, plastid | 33.12 | 45.69 |
| Bra030886.1-P | Field mustard | nucleus | 40.0 | 43.94 |
| KRH05443 | Soybean | nucleus | 40.21 | 43.86 |
| KRG95590 | Soybean | nucleus | 41.04 | 42.83 |
| Zm00001d008842_P001 | Maize | nucleus | 41.25 | 42.4 |
| KRH71370 | Soybean | nucleus | 40.21 | 42.14 |
| KRH32064 | Soybean | nucleus | 40.62 | 42.12 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 42.71 | 42.01 |
| KRH51873 | Soybean | nucleus | 40.83 | 41.79 |
| AT1G55110.2 | Thale cress | nucleus | 39.58 | 41.76 |
| TraesCS3B01G123600.1 | Wheat | nucleus | 43.12 | 41.65 |
| EES02307 | Sorghum | nucleus | 43.12 | 41.57 |
| Solyc06g062670.2.1 | Tomato | nucleus | 43.54 | 41.55 |
| TraesCS3A01G105100.1 | Wheat | nucleus | 42.92 | 41.53 |
| PGSC0003DMT400012504 | Potato | nucleus | 43.33 | 41.43 |
| Zm00001d039467_P001 | Maize | nucleus | 42.5 | 41.05 |
| Os01t0195000-01 | Rice | nucleus | 41.46 | 40.86 |
| KRH61193 | Soybean | nucleus | 39.79 | 40.38 |
| KRH22332 | Soybean | nucleus | 39.17 | 39.66 |
| KRH25657 | Soybean | nucleus | 38.75 | 39.49 |
| KRH55868 | Soybean | nucleus | 38.54 | 39.03 |
| KRH49655 | Soybean | nucleus | 29.38 | 38.95 |
| KRH76829 | Soybean | nucleus | 41.67 | 38.68 |
| KRG92880 | Soybean | nucleus | 41.88 | 38.0 |
| KRH26995 | Soybean | nucleus | 37.92 | 37.92 |
| KRH08298 | Soybean | nucleus | 40.21 | 37.77 |
| KRH69942 | Soybean | nucleus | 41.04 | 37.52 |
| KRH69941 | Soybean | nucleus, plastid | 41.04 | 37.52 |
| KRH33908 | Soybean | nucleus, plastid | 41.67 | 37.45 |
| KRG96824 | Soybean | nucleus | 39.17 | 37.08 |
| KRG95964 | Soybean | nucleus | 39.17 | 36.86 |
| KRH24905 | Soybean | nucleus | 40.83 | 36.23 |
| KRH49489 | Soybean | nucleus, plastid | 40.21 | 36.21 |
| KRH68532 | Soybean | nucleus | 38.54 | 36.13 |
| KRH67672 | Soybean | nucleus | 38.54 | 35.99 |
| KRH19850 | Soybean | nucleus | 38.96 | 35.62 |
| KRH32442 | Soybean | nucleus | 38.96 | 35.15 |
| KRG90705 | Soybean | nucleus | 41.46 | 35.1 |
| KRH49485 | Soybean | nucleus | 39.38 | 34.81 |
| KRH36039 | Soybean | nucleus | 41.25 | 34.68 |
| KRG89167 | Soybean | nucleus, plastid | 39.38 | 34.43 |
| KRG89014 | Soybean | nucleus | 41.04 | 34.32 |
| KRH71547 | Soybean | nucleus | 31.04 | 34.25 |
| KRH68150 | Soybean | nucleus | 32.29 | 34.22 |
| KRG96409 | Soybean | nucleus | 37.5 | 33.64 |
| KRH26399 | Soybean | nucleus | 35.0 | 33.6 |
| KRG91985 | Soybean | nucleus | 38.75 | 33.21 |
| KRH22919 | Soybean | nucleus | 35.21 | 33.2 |
| KRH34792 | Soybean | nucleus | 37.92 | 32.79 |
| KRH41885 | Soybean | nucleus | 24.17 | 30.53 |
| KRH60588 | Soybean | nucleus | 24.79 | 29.75 |
| CDY70938 | Canola | cytosol, nucleus | 16.46 | 28.94 |
| KRH58582 | Soybean | nucleus | 25.62 | 27.95 |
| KRH38986 | Soybean | nucleus | 26.88 | 27.22 |
| KRH42485 | Soybean | nucleus | 25.42 | 26.99 |
| KRH48724 | Soybean | nucleus | 26.46 | 26.29 |
Protein Annotations
| EntrezGene:100819692 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02008460 | EnsemblPlantsGene:GLYMA_13G349500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 | UniProt:I1M5B5 | InterPro:IPR013087 | EnsemblPlants:KRH23306 |
| ProteinID:KRH23306 | ProteinID:KRH23306.1 | ProteinID:KRH23307.1 | PFAM:PF12171 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR10593 | PANTHER:PTHR10593:SF24 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00023CEF4D | InterPro:Znf_C2H2_jaz |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:43919835..43922855
Molecular Weight (calculated)
52485.6 Da
IEP (calculated)
8.832
GRAVY (calculated)
-0.719
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIHKTPNMG KDDEGFDVPK TMSNLTSASG EARASSGNRT EIGTDYSQQY FTPPPTQTQP PLKKKRNLPG NPDPEAEVVA LSPKTLLATN RFICEICNKG
101: FQRDQNLQLH RRGHNLPWKL KQRSSKDIIR KKVYVCPEPS CVHHEPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKT CGTREYRCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARSVTG IVANSTTQPT EAAGVVISSS SLHQDMIHAS NNNFPLKKEQ QGCIPHWLGQ PSPSSASSSF LFSHQDHHLH
301: ENPNPRGGPT LLPPPYHQTA PHMSATALLQ KAAQMGATMS KTGSMIRTHQ QQAHVSANAA LNLSSRDHQM NPTPHDLLPF GNNKAVDNGV GVSPSLLHHV
401: INSFSSSPFE GTFEDTFGGG DAMTADEGGG GGAGGNNNEG LTRDFLGLRH LSHTDILNIA GVGNCMNSSQ HNQTRNPWQG
101: FQRDQNLQLH RRGHNLPWKL KQRSSKDIIR KKVYVCPEPS CVHHEPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKT CGTREYRCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARSVTG IVANSTTQPT EAAGVVISSS SLHQDMIHAS NNNFPLKKEQ QGCIPHWLGQ PSPSSASSSF LFSHQDHHLH
301: ENPNPRGGPT LLPPPYHQTA PHMSATALLQ KAAQMGATMS KTGSMIRTHQ QQAHVSANAA LNLSSRDHQM NPTPHDLLPF GNNKAVDNGV GVSPSLLHHV
401: INSFSSSPFE GTFEDTFGGG DAMTADEGGG GGAGGNNNEG LTRDFLGLRH LSHTDILNIA GVGNCMNSSQ HNQTRNPWQG
001: MLLHQHQQPQ QDENMSNLTS ASGDQASVSS GNITEASGSN YFPHHQQQQE QQQQQLVVPD SQTQKKRRNQ PGNPDPESEV IALSPKTLMA TNRFVCEICN
101: KGFQRDQNLQ LHRRGHNLPW KLKQRSNKEV IRKKVYVCPE ASCVHHDPSR ALGDLTGIKK HFCRKHGEKK WKCDKCSKKY AVQSDCKAHS KTCGTKEYRC
201: DCGTLFSRRD SFITHRAFCE ALAEETAREV VIPQNQNNNQ PNPLLIHQSA SHPHHHHQTQ PTINVSSSSS SSHNHNIINS LHFDTNNGNT NNSNNSNNHL
301: HTFPMKKEQQ SNDHIMNYHH SIIPPWLAPQ PHALTSSNPN PSNGGGGGGS LFSLASPAMS ATALLQKAAQ MGSTKTPPLP PTTAYERSTH NNNLTTTMAA
401: MMTSPSGFIS SNNNNHVLFQ DYNASGFDNH GREEAFDDTF GGFLRTNEVT AAAGSEKSTK SGGGEGLTRD FLGLRPLMSH NEILSFAGLG SCINSSASDQ
501: LHPKPWQG
101: KGFQRDQNLQ LHRRGHNLPW KLKQRSNKEV IRKKVYVCPE ASCVHHDPSR ALGDLTGIKK HFCRKHGEKK WKCDKCSKKY AVQSDCKAHS KTCGTKEYRC
201: DCGTLFSRRD SFITHRAFCE ALAEETAREV VIPQNQNNNQ PNPLLIHQSA SHPHHHHQTQ PTINVSSSSS SSHNHNIINS LHFDTNNGNT NNSNNSNNHL
301: HTFPMKKEQQ SNDHIMNYHH SIIPPWLAPQ PHALTSSNPN PSNGGGGGGS LFSLASPAMS ATALLQKAAQ MGSTKTPPLP PTTAYERSTH NNNLTTTMAA
401: MMTSPSGFIS SNNNNHVLFQ DYNASGFDNH GREEAFDDTF GGFLRTNEVT AAAGSEKSTK SGGGEGLTRD FLGLRPLMSH NEILSFAGLG SCINSSASDQ
501: LHPKPWQG
Arabidopsis Description
AtIDD11indeterminate(ID)-domain 11 [Source:TAIR;Acc:AT3G13810]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.