CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 4
plastid 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89168	Soybean	nucleus, plastid	60.6	92.82
CDY04118	Canola	nucleus	20.45	91.6
CDY09390	Canola	nucleus	20.07	89.92
CDY53540	Canola	nucleus	26.08	71.65
CDY04117	Canola	nucleus	27.58	68.69
KRG90705	Soybean	nucleus	67.17	63.14
KRH36039	Soybean	nucleus	67.17	62.7
VIT_01s0010g02100.t01	Wine grape	nucleus	60.23	56.12
KRH67268	Soybean	nucleus	27.2	55.56
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	36.4	53.3
GSMUA_Achr9P23870_001	Banana	nucleus	41.84	51.38
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	37.9	50.75
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	45.4	49.39
KRH49485	Soybean	nucleus	49.72	48.8
KRH34792	Soybean	nucleus	50.09	48.11
KRG89167	Soybean	nucleus, plastid	49.16	47.72
KRG91985	Soybean	nucleus	49.53	47.14
GSMUA_Achr1P07110_001	Banana	nucleus	42.78	46.91
GSMUA_Achr3P13990_001	Banana	nucleus	37.15	46.48
GSMUA_Achr4P04310_001	Banana	nucleus	41.09	46.3
GSMUA_Achr1P17940_001	Banana	nucleus	39.59	45.18
PGSC0003DMT400075837	Potato	nucleus	43.9	45.17
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	41.28	44.99
GSMUA_Achr1P02080_001	Banana	nucleus	46.15	44.97
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	55.72	44.93
Zm00001d021403_P001	Maize	nucleus	40.71	44.83
Os09t0555700-02	Rice	nucleus	44.84	44.67
Solyc04g008500.2.1	Tomato	nucleus	43.15	44.49
GSMUA_Achr10P...	Banana	nucleus	39.96	44.47
TraesCS5A01G356100.1	Wheat	nucleus, plastid	44.65	43.67
KRH15560	Soybean	nucleus	33.4	43.63
TraesCS5D01G364900.1	Wheat	nucleus, plastid	44.28	43.14
TraesCS5B01G358600.1	Wheat	nucleus, plastid	44.09	43.04
OQU89911	Sorghum	nucleus, plastid	42.78	42.78
CDY59418	Canola	nucleus	33.02	42.62
CDY45271	Canola	nucleus	32.46	41.59
KXG25416	Sorghum	nucleus	42.96	41.41
Os08t0554400-02	Rice	nucleus	42.4	41.24
KRH05443	Soybean	nucleus	33.77	40.91
KRH25657	Soybean	nucleus	35.65	40.34
GSMUA_Achr11P...	Banana	nucleus	40.34	40.34
Bra026819.1-P	Field mustard	nucleus	35.27	40.26
Bra026204.1-P	Field mustard	nucleus, plastid	33.96	40.22
CDY45270	Canola	nucleus	33.96	40.22
KRH10015	Soybean	nucleus	35.83	40.21
KRH23306	Soybean	nucleus	36.21	40.21
KRH49655	Soybean	nucleus	27.2	40.06
CDY17440	Canola	nucleus	35.83	39.96
KRH22332	Soybean	nucleus	35.46	39.87
CDY17615	Canola	nucleus	39.4	39.85
CDX81653	Canola	nucleus	34.9	39.83
CDY03081	Canola	nucleus	39.02	39.69
KRH71370	Soybean	nucleus	33.77	39.3
AT1G14580.3	Thale cress	nucleus	35.46	39.29
TraesCS6A01G254500.1	Wheat	nucleus	42.59	39.27
TraesCS6D01G235800.1	Wheat	nucleus	42.59	39.27
KRH55868	Soybean	nucleus	34.9	39.24
TraesCS6B01G271000.1	Wheat	nucleus	42.4	39.24
KRH47108	Soybean	nucleus	36.59	39.16
KRG95590	Soybean	nucleus	33.77	39.13
KRH32064	Soybean	nucleus	33.96	39.09
KRH51873	Soybean	nucleus	34.33	39.02
GSMUA_Achr4P05240_001	Banana	nucleus	36.59	39.0
AT2G02080.3	Thale cress	nucleus, plastid	37.52	38.76
CDY09391	Canola	nucleus	41.09	38.62
TraesCS2B01G421100.1	Wheat	nucleus	44.28	38.56
KRH26995	Soybean	nucleus	34.71	38.54
KRH67672	Soybean	nucleus	37.15	38.52
CDY15814	Canola	nucleus	34.15	38.48
Zm00001d017560_P001	Maize	nucleus	41.84	38.32
KRG95964	Soybean	nucleus	36.59	38.24
EES11271	Sorghum	nucleus	42.96	38.23
Zm00001d026113_P006	Maize	nucleus	42.96	38.23
CDY15811	Canola	nucleus	40.71	38.2
KRH19850	Soybean	nucleus	37.52	38.1
Bra024834.1-P	Field mustard	nucleus, plastid	39.4	38.04
Os02t0672100-01	Rice	nucleus	43.71	37.89
Zm00001d031992_P001	Maize	nucleus	42.96	37.85
KRH32442	Soybean	nucleus	37.71	37.78
Bra026203.1-P	Field mustard	nucleus, plastid	32.83	37.72
GSMUA_Achr11P...	Banana	nucleus	39.96	37.63
KRH61193	Soybean	nucleus	33.4	37.63
CDY17614	Canola	nucleus, plastid	36.21	37.62
Bra026616.1-P	Field mustard	nucleus	36.02	37.57
KXG31026	Sorghum	nucleus	41.84	37.48
Bra024833.1-P	Field mustard	plastid	36.02	37.43
GSMUA_Achr11P...	Banana	nucleus	35.83	37.38
Os04t0566400-02	Rice	nucleus	42.96	37.36
CDY03080	Canola	nucleus, plastid	36.02	37.21
Bra026617.1-P	Field mustard	nucleus	41.09	37.12
Bra040974.1-P	Field mustard	nucleus, plastid	40.53	36.92
KRH44134	Soybean	nucleus	36.59	36.79
KRH76829	Soybean	nucleus	35.65	36.75
Bra023223.1-P	Field mustard	plastid	32.83	36.46
KRH71547	Soybean	nucleus	29.64	36.32
AT2G02070.2	Thale cress	nucleus	40.71	36.05
KRG92880	Soybean	nucleus	35.65	35.92
TraesCS2D01G400300.2	Wheat	nucleus	44.47	35.8
KRH33908	Soybean	nucleus, plastid	35.83	35.77
TraesCS2A01G403200.2	Wheat	nucleus	44.09	35.44
KXG36163	Sorghum	nucleus	38.65	35.4
Zm00001d002654_P003	Maize	nucleus	42.03	35.39
KRH69941	Soybean	nucleus, plastid	34.71	35.24
KRH69942	Soybean	nucleus	34.71	35.24
KRH08298	Soybean	nucleus	33.77	35.23
KRH24905	Soybean	nucleus	35.46	34.94
KRH68150	Soybean	nucleus	29.64	34.88
KRH26399	Soybean	nucleus	32.65	34.8
KRH68532	Soybean	nucleus	33.21	34.57
CDY12268	Canola	nucleus	28.89	34.53
KRG96824	Soybean	nucleus	32.83	34.52
KRG96409	Soybean	nucleus	34.33	34.21
KRH22919	Soybean	nucleus	32.65	34.18
KRG89014	Soybean	nucleus	35.65	33.1
Zm00001d006319_P001	Maize	nucleus	34.52	32.92
CDY68983	Canola	nucleus	23.83	32.48
KRH41885	Soybean	nucleus	21.2	29.74
KRH60588	Soybean	nucleus	21.2	28.25
KRH58582	Soybean	nucleus	21.95	26.59
KRH42485	Soybean	nucleus	22.14	26.11
KRH38986	Soybean	nucleus	22.7	25.53
KRH48724	Soybean	nucleus	22.51	24.84

Protein Annotations

EntrezGene:100807789	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02004375	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G158200
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:K7L204	EnsemblPlants:KRH49489
ProteinID:KRH49489	ProteinID:KRH49489.1	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF50
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233897B	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:19657797..19666752

Molecular Weight (calculated)

59015.2 Da

IEP (calculated)

8.808

GRAVY (calculated)

-0.895

Length

533 amino acids

Sequence
(BLAST)

001: MAAPFSAASL FAIREEDQNQ MKQQQHSSTP SSSTTPAAPP QKKRRNQPGT PYPDAEVIAL SPKTLMATNR FLCEVCNKGF QREQNLQLHR RGHNLPWKLK
101: QKTNKEPKRK VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAQ
201: ESARDQPPNL SSAISNQLYG NSNNISLGLS QMGPQIPSIH DQNHQSSDLL HFGGAPRTGQ FDHILPPNIA SSSPFRPSMQ TPPFFMQEPN QTYHDSNKPF
301: QGLIQLSDLN NNNAPSGSNF FNLPFLSNRA NKNNNYSEEQ QQFNTAEESN FFSESTMNIG TDHQANSTTT APSLFSTNSL QNTNISHMSA TALLQKAAQM
401: GSTSSSNHNI INNNTTNNNP SASSILRSLA SKSDQRQLGG GAGNYATIFN NSVQEMMDIS GFEAYDHHGG MNKEQKLGVG GSDRLTRDFL GVAQQQQQQQ
501: REGFNLVSSL ESETNNNNAA PSGQSFGSDG NFQ

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.