Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 26.63 | 92.44 |
| CDY09390 | Canola | nucleus | 26.63 | 92.44 |
| Bra026819.1-P | Field mustard | nucleus | 99.03 | 87.58 |
| CDX81653 | Canola | nucleus | 97.82 | 86.51 |
| CDY53540 | Canola | nucleus | 33.66 | 71.65 |
| AT1G14580.3 | Thale cress | nucleus | 83.05 | 71.31 |
| CDY14910 | Canola | nucleus | 22.03 | 68.42 |
| CDY37489 | Canola | nucleus | 28.57 | 64.13 |
| CDY72283 | Canola | nucleus | 28.09 | 61.38 |
| CDY04117 | Canola | nucleus | 31.72 | 61.22 |
| CDY17440 | Canola | nucleus | 68.52 | 59.2 |
| CDY15814 | Canola | nucleus | 65.13 | 56.87 |
| CDY17614 | Canola | nucleus, plastid | 66.83 | 53.8 |
| CDY03080 | Canola | nucleus, plastid | 67.07 | 53.68 |
| CDY70142 | Canola | nucleus | 21.79 | 49.45 |
| KRG89168 | Soybean | nucleus, plastid | 36.8 | 43.68 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 37.77 | 42.86 |
| CDX96046 | Canola | nucleus | 22.03 | 39.06 |
| CDY03081 | Canola | nucleus | 47.7 | 37.6 |
| CDY17615 | Canola | nucleus | 47.94 | 37.57 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 38.5 | 37.32 |
| CDY09391 | Canola | nucleus | 51.09 | 37.21 |
| CDY15811 | Canola | nucleus | 51.09 | 37.15 |
| CDX97281 | Canola | nucleus, plastid | 34.14 | 36.62 |
| CDY24490 | Canola | nucleus | 38.26 | 36.32 |
| CDY45271 | Canola | nucleus | 36.32 | 36.06 |
| CDX77936 | Canola | nucleus | 37.77 | 35.78 |
| CDX94759 | Canola | nucleus | 40.19 | 35.78 |
| CDY22307 | Canola | nucleus | 40.19 | 35.78 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 33.9 | 35.18 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 39.47 | 34.9 |
| CDX91304 | Canola | nucleus, plastid | 34.14 | 34.9 |
| CDY45270 | Canola | nucleus | 38.01 | 34.89 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 40.92 | 34.77 |
| CDX75732 | Canola | nucleus | 36.56 | 34.09 |
| CDY32514 | Canola | nucleus | 40.19 | 33.88 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 40.19 | 33.88 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 38.74 | 33.83 |
| CDX82515 | Canola | nucleus | 36.08 | 33.79 |
| CDY18188 | Canola | nucleus | 38.98 | 33.61 |
| GSMUA_Achr10P... | Banana | nucleus | 38.98 | 33.61 |
| CDY11241 | Canola | nucleus | 40.92 | 33.6 |
| CDX86010 | Canola | nucleus | 36.32 | 33.48 |
| CDX80854 | Canola | nucleus | 40.68 | 33.27 |
| CDX89862 | Canola | nucleus | 38.5 | 33.12 |
| KRH49489 | Soybean | nucleus, plastid | 42.62 | 33.02 |
| CDY44344 | Canola | nucleus | 39.95 | 33.0 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 34.62 | 32.95 |
| CDY53836 | Canola | nucleus | 36.08 | 32.89 |
| CDY10404 | Canola | nucleus | 40.19 | 32.74 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 38.74 | 32.72 |
| CDY67009 | Canola | nucleus | 37.29 | 32.35 |
| Os09t0555700-02 | Rice | nucleus | 41.89 | 32.34 |
| CDY57128 | Canola | nucleus | 38.5 | 32.32 |
| CDX81372 | Canola | nucleus | 38.01 | 32.11 |
| CDY51742 | Canola | nucleus | 37.53 | 32.02 |
| Zm00001d021403_P001 | Maize | nucleus | 37.53 | 32.02 |
| CDX70328 | Canola | nucleus | 39.71 | 31.91 |
| CDY55238 | Canola | nucleus | 37.53 | 31.89 |
| KRH49485 | Soybean | nucleus | 41.65 | 31.68 |
| CDX97521 | Canola | nucleus | 37.05 | 31.55 |
| KRG90705 | Soybean | nucleus | 43.1 | 31.39 |
| Solyc04g008500.2.1 | Tomato | nucleus | 39.23 | 31.33 |
| PGSC0003DMT400075837 | Potato | nucleus | 39.23 | 31.27 |
| Os08t0554400-02 | Rice | nucleus | 41.16 | 31.02 |
| KRH36039 | Soybean | nucleus | 42.86 | 31.0 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 40.92 | 30.95 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 40.68 | 30.83 |
| KXG25416 | Sorghum | nucleus | 41.16 | 30.74 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 40.68 | 30.71 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 42.37 | 30.59 |
| KRH34792 | Soybean | nucleus | 40.68 | 30.27 |
| KRG89167 | Soybean | nucleus, plastid | 40.19 | 30.24 |
| GSMUA_Achr11P... | Banana | nucleus | 38.98 | 30.21 |
| OQU89911 | Sorghum | nucleus, plastid | 38.98 | 30.21 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 36.56 | 30.2 |
| KRG91985 | Soybean | nucleus | 40.68 | 30.0 |
| GSMUA_Achr11P... | Banana | nucleus | 36.08 | 29.16 |
| CDY12268 | Canola | nucleus | 31.48 | 29.15 |
| EES11271 | Sorghum | nucleus | 41.89 | 28.88 |
| Os02t0672100-01 | Rice | nucleus | 42.86 | 28.78 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 38.01 | 28.7 |
| Zm00001d017560_P001 | Maize | nucleus | 40.44 | 28.69 |
| KXG31026 | Sorghum | nucleus | 41.16 | 28.57 |
| Zm00001d026113_P006 | Maize | nucleus | 41.4 | 28.55 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 39.71 | 28.47 |
| GSMUA_Achr11P... | Banana | nucleus | 38.98 | 28.45 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 42.13 | 28.43 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 39.71 | 28.37 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 39.71 | 28.37 |
| Os04t0566400-02 | Rice | nucleus | 41.65 | 28.06 |
| CDY68983 | Canola | nucleus | 26.39 | 27.88 |
| Zm00001d031992_P001 | Maize | nucleus | 40.44 | 27.6 |
| Zm00001d002654_P003 | Maize | nucleus | 41.65 | 27.17 |
| CDY04204 | Canola | nucleus | 23.49 | 27.02 |
| CDY36123 | Canola | nucleus | 24.7 | 26.98 |
| CDY51986 | Canola | nucleus | 24.7 | 26.98 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 42.13 | 26.28 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 42.13 | 26.24 |
| CDX84974 | Canola | nucleus | 23.73 | 25.59 |
| CDY60366 | Canola | nucleus | 23.73 | 25.59 |
| CDY04203 | Canola | plastid | 23.73 | 25.45 |
| Zm00001d006319_P001 | Maize | nucleus | 32.93 | 24.33 |
| KXG36163 | Sorghum | nucleus | 34.14 | 24.23 |
| CDY07400 | Canola | nucleus | 23.97 | 23.97 |
| CDY60095 | Canola | nucleus | 25.42 | 23.76 |
| CDY09400 | Canola | nucleus | 25.18 | 23.74 |
| CDY17620 | Canola | nucleus | 25.42 | 23.65 |
| CDY15800 | Canola | nucleus | 25.18 | 23.53 |
| CDY63960 | Canola | nucleus | 25.18 | 23.06 |
| CDY04102 | Canola | nucleus | 24.94 | 22.94 |
| CDY70938 | Canola | cytosol, nucleus | 14.29 | 21.61 |
| CDY67587 | Canola | cytosol, nucleus | 10.9 | 20.0 |
Protein Annotations
| EnsemblPlants:CDY59418 | EnsemblPlantsGene:GSBRNA2T00026063001 | Gene3D:3.30.160.60 | GO:A0A078J7N0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 |
| PFscan:PS50157 | ProteinID:CDY59418 | ProteinID:CDY59418.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EDE6AA | UniProt:A0A078J7N0 | MapMan:15.5.15 | : | : |
Description
BnaA09g56910DBnaA09g56910D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078J7N0]
Coordinates
chrLK033761:+:3..2771
Molecular Weight (calculated)
45531.0 Da
IEP (calculated)
8.859
GRAVY (calculated)
-0.712
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: RNQPGNSYPD AEVIALSPKT IMATNRFLCE VCNKGFQREQ NLQLHRRGHN LPWKLKQKSN KEVRRKVYIC PEPTCVHHDP SRALGDLTGI KKHYYRKHGE
101: KKWNCEKCSK RYAVQSDWKA HSKICGTKEY RCDCGTIFSR RDSYITHRAF CDALIQESAR NPTVSFTAIA AASGGGGRHG FYGGASSALS HNHFGNNSNT
201: GFTPLAAGYN LNRSSSEKFE DFIPQPTNPY HGPNNFLMQC SSNQGLLEHN DQSLLNQHGM ISLGDTINNN NNNLFNLGNF QLNIKNSDQI SAPSLFADGA
301: ENNDPSALLR GLTSSSSSSA VVNEFGDNVN GNLHGLMNSL ATTTDQQGRS GSSIFDLHFG NNLSMGGSDR LTLDFLGVNG RVMSNVNGRG GRNPAPLDTE
401: MKFSQPNHPF ERA
101: KKWNCEKCSK RYAVQSDWKA HSKICGTKEY RCDCGTIFSR RDSYITHRAF CDALIQESAR NPTVSFTAIA AASGGGGRHG FYGGASSALS HNHFGNNSNT
201: GFTPLAAGYN LNRSSSEKFE DFIPQPTNPY HGPNNFLMQC SSNQGLLEHN DQSLLNQHGM ISLGDTINNN NNNLFNLGNF QLNIKNSDQI SAPSLFADGA
301: ENNDPSALLR GLTSSSSSSA VVNEFGDNVN GNLHGLMNSL ATTTDQQGRS GSSIFDLHFG NNLSMGGSDR LTLDFLGVNG RVMSNVNGRG GRNPAPLDTE
401: MKFSQPNHPF ERA
001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.