Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 21.01 | 84.03 |
| CDY09390 | Canola | nucleus | 20.59 | 82.35 |
| CDX81372 | Canola | nucleus | 78.15 | 76.07 |
| AT5G66730.1 | Thale cress | nucleus | 79.41 | 75.6 |
| CDY57128 | Canola | nucleus | 77.94 | 75.41 |
| CDY14910 | Canola | nucleus | 20.59 | 73.68 |
| CDY37489 | Canola | nucleus | 27.52 | 71.2 |
| CDY24490 | Canola | nucleus | 62.4 | 68.28 |
| CDY72283 | Canola | nucleus | 27.1 | 68.25 |
| CDX77936 | Canola | nucleus | 62.4 | 68.12 |
| CDY53540 | Canola | nucleus | 24.79 | 60.82 |
| CDY04117 | Canola | nucleus | 26.47 | 58.88 |
| CDY70142 | Canola | nucleus | 22.06 | 57.69 |
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 60.71 | 57.11 |
| KRH76829 | Soybean | nucleus | 59.45 | 54.74 |
| KRH08298 | Soybean | nucleus | 55.67 | 51.86 |
| KRH69941 | Soybean | nucleus, plastid | 55.88 | 50.67 |
| KRH69942 | Soybean | nucleus | 55.88 | 50.67 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 53.57 | 48.57 |
| CDX97281 | Canola | nucleus, plastid | 35.08 | 43.38 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 49.16 | 43.09 |
| CDX96046 | Canola | nucleus | 20.8 | 42.49 |
| CDX91304 | Canola | nucleus, plastid | 35.92 | 42.33 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 43.28 | 42.3 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 46.64 | 42.05 |
| EER95332 | Sorghum | nucleus | 46.22 | 41.9 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 45.8 | 41.44 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 51.05 | 41.05 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 45.8 | 40.67 |
| Zm00001d028139_P001 | Maize | nucleus | 46.01 | 40.63 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 49.58 | 40.62 |
| Os03t0197800-00 | Rice | nucleus | 46.01 | 39.67 |
| CDX75732 | Canola | nucleus | 36.76 | 39.5 |
| CDX86010 | Canola | nucleus | 36.97 | 39.29 |
| Solyc02g062940.2.1 | Tomato | nucleus | 53.99 | 39.18 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 44.12 | 38.89 |
| CDY22307 | Canola | nucleus | 37.82 | 38.79 |
| CDY53836 | Canola | nucleus | 36.55 | 38.41 |
| CDX94759 | Canola | nucleus | 37.4 | 38.36 |
| CDY32514 | Canola | nucleus | 39.29 | 38.16 |
| CDX82515 | Canola | nucleus | 35.29 | 38.1 |
| CDY51742 | Canola | nucleus | 38.66 | 38.02 |
| CDX97521 | Canola | nucleus | 38.66 | 37.94 |
| CDY18188 | Canola | nucleus | 37.82 | 37.58 |
| CDY55238 | Canola | nucleus | 38.24 | 37.45 |
| CDX89862 | Canola | nucleus | 37.6 | 37.29 |
| CDY59418 | Canola | nucleus | 32.35 | 37.29 |
| CDY11241 | Canola | nucleus | 39.08 | 36.98 |
| CDY45271 | Canola | nucleus | 32.14 | 36.78 |
| CDX80854 | Canola | nucleus | 38.87 | 36.63 |
| CDY10404 | Canola | nucleus | 38.87 | 36.49 |
| CDY44344 | Canola | nucleus | 38.24 | 36.4 |
| CDX70328 | Canola | nucleus | 38.66 | 35.8 |
| CDY17440 | Canola | nucleus | 35.29 | 35.15 |
| CDY45270 | Canola | nucleus | 32.98 | 34.89 |
| CDY17615 | Canola | nucleus | 38.45 | 34.72 |
| CDY17614 | Canola | nucleus, plastid | 37.4 | 34.7 |
| PGSC0003DMT400040064 | Potato | nucleus | 53.57 | 34.65 |
| CDY03081 | Canola | nucleus | 38.03 | 34.54 |
| CDY15814 | Canola | nucleus | 34.03 | 34.25 |
| CDY03080 | Canola | nucleus, plastid | 36.76 | 33.91 |
| CDX81653 | Canola | nucleus | 33.19 | 33.83 |
| CDY15811 | Canola | nucleus | 39.29 | 32.92 |
| CDY09391 | Canola | nucleus | 39.08 | 32.8 |
| CDX84974 | Canola | nucleus | 24.37 | 30.29 |
| CDY60366 | Canola | nucleus | 24.16 | 30.03 |
| CDY04204 | Canola | nucleus | 22.06 | 29.25 |
| CDY51986 | Canola | nucleus | 23.11 | 29.1 |
| CDY36123 | Canola | nucleus | 23.11 | 29.1 |
| CDY67587 | Canola | cytosol, nucleus | 13.45 | 28.44 |
| CDY04203 | Canola | plastid | 22.9 | 28.31 |
| CDY17620 | Canola | nucleus | 25.63 | 27.48 |
| CDY70938 | Canola | cytosol, nucleus | 15.76 | 27.47 |
| CDY60095 | Canola | nucleus | 25.42 | 27.38 |
| CDY07400 | Canola | nucleus | 23.53 | 27.12 |
| CDY04102 | Canola | nucleus | 25.42 | 26.95 |
| CDY09400 | Canola | nucleus | 24.79 | 26.94 |
| CDY12268 | Canola | nucleus | 25.21 | 26.91 |
| CDY63960 | Canola | nucleus | 25.42 | 26.83 |
| CDY15800 | Canola | nucleus | 24.79 | 26.7 |
| CDY68983 | Canola | nucleus | 20.59 | 25.06 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078JJR8 | UniProt:A0A078JJR8 | EnsemblPlants:CDY67009 | ProteinID:CDY67009 |
| ProteinID:CDY67009.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00057839001 | InterPro:IPR013087 |
| PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF20 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EE32EB | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
BnaCnng53120DBnaCnng53120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJR8]
Coordinates
chrLK035671:-:2454..4653
Molecular Weight (calculated)
50251.7 Da
IEP (calculated)
9.010
GRAVY (calculated)
-0.444
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVDLDNSST VSGDARSVSS TGNQNHKPPK KKRNLPGMPD PGAEVIALSP KTLMATNRFV CEICKKGFQR DQNLQLHRRG HNLPWKLRQR SSKEVRKKVY
101: VCPVSGCVHH DPSRALGDLT GIKKHFCRKH GEKKYKCDKC SKKYAVQSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDVLAEET ANNHTHTNQL
201: CPQTSVVLEP DLKSPASAAP LTPPPTSNEP AKISSPSVLP VESSSESPEN NPLEVIMDEE PPRTIGFNVS DDHSRTPRTT ASPSLYASST PPSTSLFAPS
301: SSMEPISLCL STNPSLFGRP TMAQDPPPHF LTPLSLPPPQ PAMSATALLQ KAAQMGSTGS GGSLLRGLGV VSSASSSSME LSSHDLGLGL LPCSSSGGSG
401: GGSGGLKELM LGNSCVFGPK QTTLDFLGLG RAVGNGSSNP VGGLSALLTS IGGGGGMNVF GTAGEFSGKD IGRRSS
101: VCPVSGCVHH DPSRALGDLT GIKKHFCRKH GEKKYKCDKC SKKYAVQSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDVLAEET ANNHTHTNQL
201: CPQTSVVLEP DLKSPASAAP LTPPPTSNEP AKISSPSVLP VESSSESPEN NPLEVIMDEE PPRTIGFNVS DDHSRTPRTT ASPSLYASST PPSTSLFAPS
301: SSMEPISLCL STNPSLFGRP TMAQDPPPHF LTPLSLPPPQ PAMSATALLQ KAAQMGSTGS GGSLLRGLGV VSSASSSSME LSSHDLGLGL LPCSSSGGSG
401: GGSGGLKELM LGNSCVFGPK QTTLDFLGLG RAVGNGSSNP VGGLSALLTS IGGGGGMNVF GTAGEFSGKD IGRRSS
001: MPVDLDNSST VSGDASVSST GNQNLTPKSV GKKKRNLPGM PDPDAEVIAL SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSTKEVRKK
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
Arabidopsis Description
IDD1IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.