Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028139_P001 | Maize | nucleus | 91.05 | 88.68 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 69.33 | 74.74 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 74.67 | 74.24 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 73.33 | 73.19 |
| Os03t0197800-00 | Rice | nucleus | 76.76 | 73.01 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 72.57 | 71.08 |
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 48.19 | 50.0 |
| AT3G50700.1 | Thale cress | nucleus | 41.52 | 48.23 |
| Bra036098.1-P | Field mustard | nucleus, plastid | 40.0 | 48.17 |
| CDX77936 | Canola | nucleus | 40.0 | 48.17 |
| KRH76829 | Soybean | nucleus | 47.43 | 48.16 |
| CDY24490 | Canola | nucleus | 39.62 | 47.82 |
| CDY67009 | Canola | nucleus | 41.9 | 46.22 |
| AT5G66730.1 | Thale cress | nucleus | 43.05 | 45.2 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 44.95 | 44.95 |
| KRH08298 | Soybean | nucleus | 43.62 | 44.81 |
| CDX81372 | Canola | nucleus | 41.71 | 44.79 |
| KRH69941 | Soybean | nucleus, plastid | 44.57 | 44.57 |
| KRH69942 | Soybean | nucleus | 44.57 | 44.57 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 49.9 | 44.26 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 45.71 | 44.2 |
| Bra037151.1-P | Field mustard | nucleus | 41.33 | 44.11 |
| CDY57128 | Canola | nucleus | 41.14 | 43.9 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 47.24 | 42.69 |
| EES02157 | Sorghum | nucleus | 37.9 | 41.37 |
| EES00944 | Sorghum | nucleus | 37.14 | 40.54 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 40.38 | 39.26 |
| EES02307 | Sorghum | nucleus | 36.19 | 38.15 |
| KXG38489 | Sorghum | nucleus | 29.9 | 36.68 |
| KXG30322 | Sorghum | nucleus | 32.38 | 35.79 |
| EES05153 | Sorghum | nucleus | 33.14 | 35.44 |
| KXG25416 | Sorghum | nucleus | 37.14 | 35.26 |
| Solyc02g062940.2.1 | Tomato | nucleus | 43.81 | 35.06 |
| KXG31026 | Sorghum | nucleus | 39.24 | 34.62 |
| EES04172 | Sorghum | nucleus | 33.71 | 34.04 |
| EES11271 | Sorghum | nucleus | 38.48 | 33.72 |
| OQU89911 | Sorghum | nucleus, plastid | 33.9 | 33.4 |
| PGSC0003DMT400040064 | Potato | nucleus | 43.81 | 31.25 |
| KXG36163 | Sorghum | nucleus | 31.24 | 28.18 |
| EER97442 | Sorghum | nucleus | 41.52 | 27.81 |
| KXG39813 | Sorghum | nucleus, plastid | 23.43 | 26.8 |
| EER96827 | Sorghum | nucleus | 24.95 | 26.25 |
| EES13982 | Sorghum | nucleus | 24.95 | 24.44 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:8081884 | UniProt:C5WTW1 | ncoils:Coil | EnsemblPlants:EER95332 |
| ProteinID:EER95332 | ProteinID:EER95332.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 |
| InterPro:IPR013087 | ProteinID:OQU93061.1 | ProteinID:OQU93062.1 | PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR10593 | PANTHER:PTHR10593:SF20 | SMART:SM00355 | EnsemblPlantsGene:SORBI_3001G469100 | SUPFAM:SSF57667 | unigene:Sbi.15664 |
| UniParc:UPI0001A82DA0 | RefSeq:XP_002468334.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:74191896..74200679
Molecular Weight (calculated)
54926.2 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.413
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVETTPTTA VSSSGGAAQL PPPGPPAKKK RALPGMPDPD AEVIALSPKT LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRSG KEARKRVYVC
101: PEPSCVHHDP SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HVKTCGSREY RCDCGTLFSR RDSFITHRAF CDALAEESAK ARVEAPPAED
201: GSSAAAVVPP PVPPPPPAPA PLRQQPPPPA PHHAEQRNEP EANATEPVQF APPPPQVPVP VLSQTTVSAA NVSASSSSTV AGTSQSLLGG MFAPSSMASA
301: PQFPERALPV KPPSLCLATD ASSSIFSAPV STERQQFAPP PPPSPSPSPH MSATTLLQKA AQMGATSSSS SFLRGLGLDV SSSSPGASSS GQPQHHHEGA
401: MQVSLPDASL PQWPPRLEHE PSPMLSAGLG LGLPYDSTGA QVCLPELMMG QSSLFSGKPA TLDFLGLGMS PTGAPASRGI PAFIQPIGGA VGMAGTGAGA
501: AETFGAGRGP QATPWERNPS SSPIL
101: PEPSCVHHDP SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HVKTCGSREY RCDCGTLFSR RDSFITHRAF CDALAEESAK ARVEAPPAED
201: GSSAAAVVPP PVPPPPPAPA PLRQQPPPPA PHHAEQRNEP EANATEPVQF APPPPQVPVP VLSQTTVSAA NVSASSSSTV AGTSQSLLGG MFAPSSMASA
301: PQFPERALPV KPPSLCLATD ASSSIFSAPV STERQQFAPP PPPSPSPSPH MSATTLLQKA AQMGATSSSS SFLRGLGLDV SSSSPGASSS GQPQHHHEGA
401: MQVSLPDASL PQWPPRLEHE PSPMLSAGLG LGLPYDSTGA QVCLPELMMG QSSLFSGKPA TLDFLGLGMS PTGAPASRGI PAFIQPIGGA VGMAGTGAGA
501: AETFGAGRGP QATPWERNPS SSPIL
001: MPVDLDNSST VSGDASVSST GNQNLTPKSV GKKKRNLPGM PDPDAEVIAL SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSTKEVRKK
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
Arabidopsis Description
IDD1IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.