Factsheet for Bra037151.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57128	Canola	nucleus	99.19	99.19
CDX81372	Canola	nucleus	93.29	93.86
AT5G66730.1	Thale cress	nucleus	83.13	81.8
Bra036098.1-P	Field mustard	nucleus, plastid	63.41	71.56
Bra036013.1-P	Field mustard	nucleus	22.36	69.62
VIT_04s0023g01430.t01	Wine grape	nucleus	59.15	57.51
KRH76829	Soybean	nucleus	57.11	54.35
KRH08298	Soybean	nucleus	53.66	51.66
KRH69942	Soybean	nucleus	53.25	49.9
KRH69941	Soybean	nucleus, plastid	53.25	49.9
PGSC0003DMT400033039	Potato	nucleus, plastid	52.44	49.14
GSMUA_Achr4P14030_001	Banana	nucleus	48.37	43.83
TraesCS4B01G262400.1	Wheat	nucleus	45.73	42.61
TraesCS4A01G041400.1	Wheat	nucleus	42.07	42.51
TraesCS4D01G262500.1	Wheat	nucleus	45.33	42.4
HORVU4Hr1G070950.8	Barley	nucleus	45.73	41.98
GSMUA_Achr3P29940_001	Banana	nucleus	49.19	41.65
Bra018535.1-P	Field mustard	plastid	34.15	41.58
Bra030886.1-P	Field mustard	nucleus	36.79	41.42
EER95332	Sorghum	nucleus	44.11	41.33
Zm00001d028139_P001	Maize	nucleus	44.92	41.0
Os03t0197800-00	Rice	nucleus	44.92	40.04
Solyc02g062940.2.1	Tomato	nucleus	52.85	39.63
GSMUA_Achr7P25960_001	Banana	nucleus	47.56	39.53
GSMUA_Achr4P07200_001	Banana	nucleus	43.29	39.44
Bra033724.1-P	Field mustard	nucleus	36.59	38.79
Bra033840.1-P	Field mustard	nucleus	35.57	38.63
Bra032541.1-P	Field mustard	nucleus	38.21	38.37
Bra015271.1-P	Field mustard	nucleus	37.4	38.17
Bra027394.1-P	Field mustard	nucleus	37.4	36.44
Bra005741.1-P	Field mustard	nucleus	36.99	36.11
Bra021510.1-P	Field mustard	nucleus	37.2	35.88
Bra026204.1-P	Field mustard	nucleus, plastid	32.52	35.56
Bra009549.1-P	Field mustard	nucleus	37.2	35.47
Bra026819.1-P	Field mustard	nucleus	33.33	35.12
PGSC0003DMT400040064	Potato	nucleus	52.24	34.92
Bra026616.1-P	Field mustard	nucleus	35.37	34.05
Bra001523.1-P	Field mustard	nucleus	34.96	33.59
Bra024833.1-P	Field mustard	plastid	34.96	33.53
Bra024834.1-P	Field mustard	nucleus, plastid	37.4	33.33
Bra026203.1-P	Field mustard	nucleus, plastid	31.3	33.19
Bra026617.1-P	Field mustard	nucleus	37.8	31.53
Bra040974.1-P	Field mustard	nucleus, plastid	36.99	31.11
Bra010981.1-P	Field mustard	nucleus	22.76	29.63
Bra024771.1-P	Field mustard	nucleus	22.97	29.5
Bra023223.1-P	Field mustard	plastid	27.85	28.54
Bra017432.1-P	Field mustard	nucleus	24.39	27.27
Bra024841.1-P	Field mustard	nucleus	24.39	27.03
Bra026624.1-P	Field mustard	nucleus	23.78	26.71
Bra004283.1-P	Field mustard	nucleus	22.15	26.46
Bra004050.1-P	Field mustard	nucleus	21.95	26.15
Bra038293.1-P	Field mustard	nucleus	35.98	19.98

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EnsemblPlantsGene:Bra037151	EnsemblPlants:Bra037151.1	EnsemblPlants:Bra037151.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009719	GO:GO:0009791	GO:GO:0009937	GO:GO:0009987	GO:GO:0010029	GO:GO:0010431
GO:GO:0044212	InterPro:IPR013087	UniProt:M4F7U0	PFAM:PF00096	ScanProsite:PS00028	PFscan:PS50157
PANTHER:PTHR10593	PANTHER:PTHR10593:SF20	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0002541CAF	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

AT5G66730 (E=5e-150) | zinc finger (C2H2 type) family protein

Coordinates

chrA09:-:4238563..4240383

Molecular Weight (calculated)

52081.2 Da

IEP (calculated)

7.672

GRAVY (calculated)

-0.467

Length

492 amino acids

Sequence
(BLAST)

001: MPVDLDDSST VSGDASVSST GNQNPPPQSA AKKKRNLPGM PDPDSEVIAL SPKTLMATNR FVCEICSKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVRKK
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKFKCE KCSKSYAVQS DWKAHSKICG SKEYRCDCGT LFSRRDSFIT HRAFCDVLAE ESAKNHTQSK
201: ELYPETVVRN NLPEPEQKSP AAVDSPPSVA LVPAPAVSVE TETEPQPANI VSSSVLPIRD SSDEPENNTL EVIMEEAPRT IGLNGSNDHS SNNSKSVYAG
301: LFASSSSSTS LYAASSTPSP SLFPPSSSME PISLCLSTTG PSLFGATIQD PPQPHFLTPL PHPPQPAISA TALLQKAAQM GSTGSGGSLL RGLGIVSTTS
401: SPMELSSHDP GFGLGLGLPC SSGSGLKELM MGNSSVFDPK QTTLDFLGLG RAVGNNNPGG GGLSSALWGG GGGMDVFGSG ELSDKDTGRR SS

Best Arabidopsis Sequence Match ( AT5G66730.1 )
(BLAST)

001: MPVDLDNSST VSGDASVSST GNQNLTPKSV GKKKRNLPGM PDPDAEVIAL SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSTKEVRKK
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS

Arabidopsis Description

IDD1IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.