Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 75.63 | 77.27 |
| KRH08298 | Soybean | nucleus | 75.63 | 76.52 |
| KRH69941 | Soybean | nucleus, plastid | 75.82 | 74.67 |
| KRH69942 | Soybean | nucleus | 75.82 | 74.67 |
| AT3G50700.1 | Thale cress | nucleus | 54.35 | 62.17 |
| CDX77936 | Canola | nucleus | 52.03 | 61.7 |
| CDY24490 | Canola | nucleus | 51.84 | 61.61 |
| Bra036098.1-P | Field mustard | nucleus, plastid | 51.84 | 61.47 |
| KRH67268 | Soybean | nucleus | 30.37 | 60.15 |
| AT5G66730.1 | Thale cress | nucleus | 57.64 | 59.6 |
| CDY67009 | Canola | nucleus | 54.74 | 59.45 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 60.35 | 59.43 |
| CDX81372 | Canola | nucleus | 54.93 | 58.08 |
| CDY57128 | Canola | nucleus | 54.35 | 57.11 |
| Bra037151.1-P | Field mustard | nucleus | 54.35 | 57.11 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 52.8 | 50.28 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 56.87 | 49.66 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 55.71 | 49.57 |
| KRH51873 | Soybean | nucleus | 43.13 | 47.55 |
| EER95332 | Sorghum | nucleus | 48.16 | 47.43 |
| Zm00001d028139_P001 | Maize | nucleus | 49.32 | 47.31 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 48.94 | 46.85 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 44.1 | 46.82 |
| KRH61193 | Soybean | nucleus | 42.55 | 46.51 |
| Solyc02g062940.2.1 | Tomato | nucleus | 58.99 | 46.49 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 47.2 | 46.21 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 47.0 | 46.2 |
| KRG89168 | Soybean | nucleus, plastid | 30.75 | 45.69 |
| Os03t0197800-00 | Rice | nucleus | 47.97 | 44.93 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 46.42 | 44.78 |
| KRH15560 | Soybean | nucleus | 34.82 | 44.12 |
| KRH05443 | Soybean | nucleus | 36.56 | 42.95 |
| KRH10015 | Soybean | nucleus | 39.46 | 42.95 |
| KRH71370 | Soybean | nucleus | 37.72 | 42.58 |
| KRG95590 | Soybean | nucleus | 37.52 | 42.17 |
| KRH47108 | Soybean | nucleus | 40.43 | 41.97 |
| KRH22332 | Soybean | nucleus | 38.3 | 41.77 |
| KRH23306 | Soybean | nucleus | 38.68 | 41.67 |
| KRH32064 | Soybean | nucleus | 37.14 | 41.47 |
| KRH25657 | Soybean | nucleus | 37.52 | 41.19 |
| KRH26995 | Soybean | nucleus | 38.1 | 41.04 |
| PGSC0003DMT400040064 | Potato | nucleus | 58.41 | 41.03 |
| KRH55868 | Soybean | nucleus | 37.33 | 40.72 |
| KRH49655 | Soybean | nucleus | 28.05 | 40.06 |
| KRH44134 | Soybean | nucleus | 40.62 | 39.62 |
| KRH19850 | Soybean | nucleus | 39.85 | 39.24 |
| KRH32442 | Soybean | nucleus | 39.85 | 38.72 |
| KRH68150 | Soybean | nucleus | 33.66 | 38.41 |
| KRG95964 | Soybean | nucleus | 37.33 | 37.84 |
| KRG96409 | Soybean | nucleus | 39.07 | 37.76 |
| KRH33908 | Soybean | nucleus, plastid | 38.88 | 37.64 |
| KRG92880 | Soybean | nucleus | 38.49 | 37.62 |
| KRG90705 | Soybean | nucleus | 41.2 | 37.57 |
| KRH67672 | Soybean | nucleus | 37.33 | 37.55 |
| KRH71547 | Soybean | nucleus | 31.33 | 37.24 |
| KRH36039 | Soybean | nucleus | 40.81 | 36.95 |
| KRH68532 | Soybean | nucleus | 36.36 | 36.72 |
| KRG96824 | Soybean | nucleus | 35.98 | 36.69 |
| KRH24905 | Soybean | nucleus | 37.33 | 35.67 |
| KRH49489 | Soybean | nucleus, plastid | 36.75 | 35.65 |
| KRH49485 | Soybean | nucleus | 37.33 | 35.54 |
| KRG91985 | Soybean | nucleus | 38.49 | 35.54 |
| KRH34792 | Soybean | nucleus | 38.1 | 35.5 |
| KRH26399 | Soybean | nucleus | 33.66 | 34.8 |
| KRH41885 | Soybean | nucleus | 25.53 | 34.74 |
| KRG89014 | Soybean | nucleus | 38.3 | 34.49 |
| KRG89167 | Soybean | nucleus, plastid | 36.56 | 34.43 |
| KRH22919 | Soybean | nucleus | 33.85 | 34.38 |
| KRH60588 | Soybean | nucleus | 26.11 | 33.75 |
| KRH38986 | Soybean | nucleus | 28.43 | 31.01 |
| KRH58582 | Soybean | nucleus | 26.31 | 30.91 |
| KRH42485 | Soybean | nucleus | 26.69 | 30.53 |
| KRH48724 | Soybean | nucleus | 28.43 | 30.43 |
Protein Annotations
| EMBL:ACUP02000644 | EnsemblPlants:KRH76829 | EnsemblPlantsGene:GLYMA_01G176600 | EntrezGene:100806404 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF20 | PFscan:PS50157 | ProteinID:KRH76829 | ProteinID:KRH76829.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002336DC4 | UniProt:I1J8W7 | MapMan:15.5.15 | : |
Description
hypothetical protein
Coordinates
chr1:+:51330150..51333965
Molecular Weight (calculated)
54327.9 Da
IEP (calculated)
8.761
GRAVY (calculated)
-0.425
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVDLDNVST ASGEASVSSS GNLTVPPKPT TKKKRNLPGM PDPDAEVIAL SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVRKR
101: VYVCPEPTCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT HRAFCDALAE ESARSQPQTV
201: AKASSESDSK AVTGDSSPPV AVEAPPPLVP PVSSQSNSVV VPSSSLQTQK PELPENSPQI IEEPKVNTAM NGSCSSTSTS TTSSTSNSNS GASSSVFASL
301: FASSSASATA SLHSQTPAFT DLIRAMGHPD HPADLSRPSS SEPISLCLAT NHGSSIFGTG RQERRQYAPP PQPAMSATAL LQKAAQMGAA ATNASFLRGL
401: GIVSSSASTS SVQQDNLQWG HQPVEPESAS VPAGLGLGLP CDSSSGLKEL MMGTPSMFGP KQTTLDFLGL GMAAGGTPGG GLSALITSIG GGLDVTTAAA
501: SFASGEFPGK DIGRRST
101: VYVCPEPTCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT HRAFCDALAE ESARSQPQTV
201: AKASSESDSK AVTGDSSPPV AVEAPPPLVP PVSSQSNSVV VPSSSLQTQK PELPENSPQI IEEPKVNTAM NGSCSSTSTS TTSSTSNSNS GASSSVFASL
301: FASSSASATA SLHSQTPAFT DLIRAMGHPD HPADLSRPSS SEPISLCLAT NHGSSIFGTG RQERRQYAPP PQPAMSATAL LQKAAQMGAA ATNASFLRGL
401: GIVSSSASTS SVQQDNLQWG HQPVEPESAS VPAGLGLGLP CDSSSGLKEL MMGTPSMFGP KQTTLDFLGL GMAAGGTPGG GLSALITSIG GGLDVTTAAA
501: SFASGEFPGK DIGRRST
001: MPVDLDNSST VSGDASVSST GNQNLTPKSV GKKKRNLPGM PDPDAEVIAL SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSTKEVRKK
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
Arabidopsis Description
IDD1IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.