Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH47108 | Soybean | nucleus | 89.06 | 94.78 |
KRH23306 | Soybean | nucleus | 61.32 | 67.71 |
KRH10015 | Soybean | nucleus | 60.0 | 66.95 |
KRH67268 | Soybean | nucleus | 31.13 | 63.22 |
VIT_09s0002g02300.t01 | Wine grape | nucleus | 63.02 | 62.78 |
CDY70142 | Canola | nucleus | 20.19 | 58.79 |
Solyc03g121660.2.1 | Tomato | nucleus | 59.43 | 58.12 |
PGSC0003DMT400006385 | Potato | nucleus | 59.06 | 57.86 |
KRG89168 | Soybean | nucleus, plastid | 31.13 | 47.41 |
KRH15560 | Soybean | nucleus | 35.85 | 46.57 |
TraesCS3D01G107300.1 | Wheat | nucleus | 42.08 | 45.7 |
TraesCS3A01G105100.1 | Wheat | nucleus | 42.26 | 45.16 |
TraesCS3B01G123600.1 | Wheat | nucleus | 42.26 | 45.07 |
Zm00001d008842_P001 | Maize | nucleus | 39.62 | 44.97 |
KRH05443 | Soybean | nucleus | 37.17 | 44.77 |
Solyc06g062670.2.1 | Tomato | nucleus | 42.26 | 44.53 |
PGSC0003DMT400012504 | Potato | nucleus | 41.89 | 44.22 |
Bra030886.1-P | Field mustard | nucleus | 36.23 | 43.94 |
KRH51873 | Soybean | nucleus | 38.68 | 43.71 |
KRH71370 | Soybean | nucleus | 37.55 | 43.45 |
EES02307 | Sorghum | nucleus | 40.75 | 43.37 |
Os01t0195000-01 | Rice | nucleus | 39.81 | 43.33 |
KRG95590 | Soybean | nucleus | 37.55 | 43.26 |
Zm00001d039467_P001 | Maize | nucleus | 40.38 | 43.06 |
KRH32064 | Soybean | nucleus | 37.55 | 42.98 |
KRH61193 | Soybean | nucleus | 37.92 | 42.49 |
KRH49655 | Soybean | nucleus | 28.87 | 42.27 |
KRH25657 | Soybean | nucleus | 37.17 | 41.83 |
KRH22332 | Soybean | nucleus | 37.36 | 41.77 |
AT1G55110.2 | Thale cress | nucleus | 35.85 | 41.76 |
KRH55868 | Soybean | nucleus | 36.79 | 41.14 |
KRH26995 | Soybean | nucleus | 36.98 | 40.83 |
KRH76829 | Soybean | nucleus | 39.62 | 40.62 |
KRH08298 | Soybean | nucleus | 37.92 | 39.33 |
KRH33908 | Soybean | nucleus, plastid | 39.43 | 39.14 |
KRG92880 | Soybean | nucleus | 39.06 | 39.13 |
KRH69941 | Soybean | nucleus, plastid | 38.3 | 38.67 |
KRH69942 | Soybean | nucleus | 38.3 | 38.67 |
KRG96824 | Soybean | nucleus | 36.98 | 38.66 |
KRG90705 | Soybean | nucleus | 41.13 | 38.45 |
KRH67672 | Soybean | nucleus | 36.98 | 38.13 |
KRH24905 | Soybean | nucleus | 38.87 | 38.08 |
KRG95964 | Soybean | nucleus | 36.42 | 37.84 |
KRH19850 | Soybean | nucleus | 37.36 | 37.71 |
KRH36039 | Soybean | nucleus | 40.57 | 37.65 |
KRH32442 | Soybean | nucleus | 37.36 | 37.22 |
KRH68532 | Soybean | nucleus | 35.85 | 37.11 |
KRH49489 | Soybean | nucleus, plastid | 36.79 | 36.59 |
KRH26399 | Soybean | nucleus | 34.34 | 36.4 |
KRH49485 | Soybean | nucleus | 36.98 | 36.1 |
KRG89014 | Soybean | nucleus | 39.06 | 36.06 |
KRH68150 | Soybean | nucleus | 30.75 | 35.98 |
KRH22919 | Soybean | nucleus | 34.53 | 35.95 |
KRG89167 | Soybean | nucleus, plastid | 36.79 | 35.52 |
KRH71547 | Soybean | nucleus | 29.06 | 35.4 |
KRG96409 | Soybean | nucleus | 34.91 | 34.58 |
KRG91985 | Soybean | nucleus | 36.42 | 34.46 |
KRH34792 | Soybean | nucleus | 36.04 | 34.41 |
KRH41885 | Soybean | nucleus | 23.02 | 32.11 |
CDY70938 | Canola | cytosol, nucleus | 16.04 | 31.14 |
KRH60588 | Soybean | nucleus | 23.4 | 31.0 |
KRH58582 | Soybean | nucleus | 23.77 | 28.64 |
KRH38986 | Soybean | nucleus | 25.47 | 28.48 |
KRH42485 | Soybean | nucleus | 23.77 | 27.88 |
KRH48724 | Soybean | nucleus | 24.91 | 27.33 |
Protein Annotations
EntrezGene:100808344 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02004908 | EnsemblPlantsGene:GLYMA_08G192300 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013087 | UniProt:K7L7L4 | EnsemblPlants:KRH44134 |
ProteinID:KRH44134 | ProteinID:KRH44134.1 | PFAM:PF12171 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
PANTHER:PTHR10593:SF49 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000295FD09 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf |
InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:15469206..15472220
Molecular Weight (calculated)
58113.0 Da
IEP (calculated)
8.908
GRAVY (calculated)
-0.691
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMKGFMFHH QQQQQVVVEE NMSNLTSASG EASAASSGNR TEIGTSYMAP PPSQTQQSKK KRNLPGNPDP DAEVIALSPK SLLATNRFIC EICNKGFQRD
101: QNLQLHRRGH NLPWKLKQRT SKEVRKKVYV CPEPSCVHHD PSRALGDLTG IKKHFCRKHG EKKWKCDKCS KKYAVQSDWK AHSKTCGTRE YRCDCGTLFS
201: RRDSFITHRA FCDALAEESA RAITNPLLPP QQQQQQPSSS SHHQMSTLQT QFNPQNNLHA FPLKKEQQSF NVRTEMPPWL GPPAATVVVD HHHHHLSSSS
301: SSIMFSPPHQ ENPNPNPSLG PTLAAYKTVA NPPHMSATAL LQKAAQMGAT MSRSGSSPAM TGPHHHAHVS YSADSASAHF GLNLSSREDT TTSTTTTTTT
401: KTATVFSHGL LSSPLGNKAG AAVSSSAPSL LHDVINSFSV SPSAFEGTPF EDAFIQSSKK LDDDDHHNLY LHDTFSKTSS STGAAGNINE GLTRDFLGLR
501: PLSHTDILTI AGIGNCIHDH QNQSQKPWQG
101: QNLQLHRRGH NLPWKLKQRT SKEVRKKVYV CPEPSCVHHD PSRALGDLTG IKKHFCRKHG EKKWKCDKCS KKYAVQSDWK AHSKTCGTRE YRCDCGTLFS
201: RRDSFITHRA FCDALAEESA RAITNPLLPP QQQQQQPSSS SHHQMSTLQT QFNPQNNLHA FPLKKEQQSF NVRTEMPPWL GPPAATVVVD HHHHHLSSSS
301: SSIMFSPPHQ ENPNPNPSLG PTLAAYKTVA NPPHMSATAL LQKAAQMGAT MSRSGSSPAM TGPHHHAHVS YSADSASAHF GLNLSSREDT TTSTTTTTTT
401: KTATVFSHGL LSSPLGNKAG AAVSSSAPSL LHDVINSFSV SPSAFEGTPF EDAFIQSSKK LDDDDHHNLY LHDTFSKTSS STGAAGNINE GLTRDFLGLR
501: PLSHTDILTI AGIGNCIHDH QNQSQKPWQG
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.