Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039467_P001 | Maize | nucleus | 74.54 | 73.04 |
| Zm00001d008842_P001 | Maize | nucleus | 69.82 | 72.81 |
| EES02307 | Sorghum | nucleus | 74.13 | 72.49 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 69.61 | 69.47 |
| TraesCS3B01G123600.1 | Wheat | nucleus | 70.64 | 69.22 |
| TraesCS3A01G105100.1 | Wheat | nucleus | 69.82 | 68.55 |
| CDY70142 | Canola | nucleus | 22.18 | 59.34 |
| Os01t0242200-01 | Rice | nucleus | 39.43 | 46.27 |
| KRH47108 | Soybean | nucleus | 43.33 | 42.37 |
| Bra030886.1-P | Field mustard | nucleus | 37.58 | 41.88 |
| KRH10015 | Soybean | nucleus | 40.66 | 41.68 |
| KRH23306 | Soybean | nucleus | 40.86 | 41.46 |
| AT1G55110.2 | Thale cress | nucleus | 38.4 | 41.1 |
| VIT_09s0002g02300.t01 | Wine grape | nucleus | 43.53 | 39.85 |
| KRH44134 | Soybean | nucleus | 43.33 | 39.81 |
| PGSC0003DMT400006385 | Potato | nucleus | 42.51 | 38.26 |
| Solyc03g121660.2.1 | Tomato | nucleus | 42.51 | 38.19 |
| Os01t0572300-01 | Rice | nucleus | 41.89 | 37.99 |
| PGSC0003DMT400012504 | Potato | nucleus | 38.19 | 37.05 |
| Os02t0518500-00 | Rice | nucleus | 37.17 | 36.79 |
| Solyc06g062670.2.1 | Tomato | nucleus | 37.99 | 36.78 |
| Os09t0555700-02 | Rice | nucleus | 40.04 | 36.45 |
| Os01t0935000-01 | Rice | nucleus | 35.32 | 36.13 |
| Os03t0197800-00 | Rice | nucleus | 40.86 | 36.05 |
| Os10t0419200-01 | Rice | nucleus | 34.7 | 35.58 |
| Os08t0554400-02 | Rice | nucleus | 39.43 | 35.04 |
| Os04t0566400-02 | Rice | nucleus | 39.01 | 31.0 |
| Os02t0672100-01 | Rice | nucleus | 38.4 | 30.41 |
| Os03t0237250-01 | Rice | plastid | 25.67 | 28.54 |
| CDY70938 | Canola | cytosol, nucleus | 15.61 | 27.84 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 34.5 | 26.5 |
| Os08t0467100-01 | Rice | nucleus | 25.26 | 23.08 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:4327319 | ProteinID:BAD72204.1 | ProteinID:BAD72423.1 | ProteinID:BAF04202.1 |
| ProteinID:BAS70855.1 | ProteinID:EAZ10885.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| EnsemblPlantsGene:Os01g0195000 | EnsemblPlants:Os01t0195000-01 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF49 |
| UniProt:Q5SMY2 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000046D43A | RefSeq:XP_015622491.1 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
indeterminate domain 2Zinc finger, C2H2-type domain containing protein. (Os01t0195000-01)
Coordinates
chr1:+:5099555..5102080
Molecular Weight (calculated)
51818.7 Da
IEP (calculated)
8.610
GRAVY (calculated)
-0.527
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLKDLAEIQ QQQLLAAAEE NMSNLTSASG DQASVSSHPA PPPAKKKRSL PGNPDPEAEV IALSPRTLMA TNRYVCEICG KGFQRDQNLQ LHRRGHNLPW
101: KLKQRNPKEV VRKKVYVCPE AGCVHHDPAR ALGDLTGIKK HFSRKHGEKK WKCDKCSKRY AVHSDWKAHS KVCGTREYRC DCGTLFSRRD SFITHRAFCD
201: ALAEESARAV TAAAAVAGQQ QHGGGMLFSQ VADVLDHQAA MAMGGHGLMQ ELCLKREQQQ QQQQFAPSWL TAQQQQQQLE AMAGAGNPAA MYGSARLDQE
301: FIGSSTPESG GAQQAGLSFG FSSTSSAPPH PAASSAHMSA TALLQKAAQM GATLSRPSSH AHMAAAAAAS THNSSSSAAT TNAPPPPPTS NVSSTCVGAG
401: GYGLAFEASH FIAADESSRG ARSDRDTGNG VAGAGNDGLT RDFLGLRAFS HGNIMSMAGF DPCMSTTSAS SAAPYDHHHH SNKPWHS
101: KLKQRNPKEV VRKKVYVCPE AGCVHHDPAR ALGDLTGIKK HFSRKHGEKK WKCDKCSKRY AVHSDWKAHS KVCGTREYRC DCGTLFSRRD SFITHRAFCD
201: ALAEESARAV TAAAAVAGQQ QHGGGMLFSQ VADVLDHQAA MAMGGHGLMQ ELCLKREQQQ QQQQFAPSWL TAQQQQQQLE AMAGAGNPAA MYGSARLDQE
301: FIGSSTPESG GAQQAGLSFG FSSTSSAPPH PAASSAHMSA TALLQKAAQM GATLSRPSSH AHMAAAAAAS THNSSSSAAT TNAPPPPPTS NVSSTCVGAG
401: GYGLAFEASH FIAADESSRG ARSDRDTGNG VAGAGNDGLT RDFLGLRAFS HGNIMSMAGF DPCMSTTSAS SAAPYDHHHH SNKPWHS
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.