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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04118 Canola nucleus 19.81 89.08
CDY09390 Canola nucleus 19.44 87.39
TraesCS5A01G356100.1 Wheat nucleus, plastid 73.46 72.11
TraesCS5D01G364900.1 Wheat nucleus, plastid 73.27 71.66
TraesCS5B01G358600.1 Wheat nucleus, plastid 72.9 71.43
CDY53540 Canola nucleus 24.49 67.53
CDY04117 Canola nucleus 26.17 65.42
KRG89168 Soybean nucleus, plastid 37.2 57.18
GSMUA_Achr9P23870_001 Banana nucleus 40.37 49.77
GSMUA_Achr3P13990_001 Banana nucleus 39.63 49.77
Os08t0554400-02 Rice nucleus 48.97 47.81
GSMUA_Achr1P17940_001 Banana nucleus 41.12 47.11
GSMUA_AchrUn_... Banana mitochondrion, nucleus 42.99 47.03
GSMUA_Achr4P11810_001 Banana mitochondrion, nucleus 42.43 46.33
Os01t0242200-01 Rice nucleus 35.89 46.27
VIT_01s0010g02100.t01 Wine grape nucleus 49.35 46.15
KRH49489 Soybean nucleus, plastid 44.67 44.84
KRH49485 Soybean nucleus 44.3 43.65
KRH34792 Soybean nucleus 44.3 42.7
KRG90705 Soybean nucleus 45.23 42.68
KRG89167 Soybean nucleus, plastid 43.55 42.44
KRG91985 Soybean nucleus 44.3 42.32
KRH36039 Soybean nucleus 44.86 42.03
CDY59418 Canola nucleus 32.34 41.89
GSMUA_Achr4P05240_001 Banana nucleus 39.07 41.8
CDY03081 Canola nucleus 40.0 40.84
CDY17440 Canola nucleus 36.26 40.59
PGSC0003DMT400075837 Potato nucleus 39.25 40.54
Solyc04g008500.2.1 Tomato nucleus 39.07 40.43
CDY17615 Canola nucleus 39.81 40.42
Os04t0566400-02 Rice nucleus 46.17 40.29
CDY45271 Canola nucleus 31.21 40.14
Os01t0195000-01 Rice nucleus 36.45 40.04
Os02t0672100-01 Rice nucleus 45.23 39.35
CDY15814 Canola nucleus 34.58 39.11
AT2G02080.3 Thale cress nucleus, plastid 37.57 38.95
VIT_01s0010g02090.t01 Wine grape extracellular, vacuole 48.04 38.88
Bra024834.1-P Field mustard nucleus, plastid 39.81 38.59
CDX81653 Canola nucleus 33.64 38.54
Bra026819.1-P Field mustard nucleus 33.64 38.54
CDY45270 Canola nucleus 32.15 38.22
Bra026204.1-P Field mustard nucleus, plastid 32.15 38.22
CDY17614 Canola nucleus, plastid 36.64 38.21
AT1G14580.3 Thale cress nucleus 34.21 38.05
Bra024833.1-P Field mustard plastid 36.45 38.01
CDY03080 Canola nucleus, plastid 36.64 37.98
Bra026616.1-P Field mustard nucleus 36.26 37.96
CDY09391 Canola nucleus 40.19 37.92
CDY15811 Canola nucleus 40.0 37.68
Bra026617.1-P Field mustard nucleus 40.37 36.61
AT2G02070.2 Thale cress nucleus 41.12 36.54
Bra040974.1-P Field mustard nucleus, plastid 39.44 36.07
Bra023223.1-P Field mustard plastid 32.34 36.04
Bra026203.1-P Field mustard nucleus, plastid 31.21 35.99
Os01t0935000-01 Rice nucleus 31.78 35.71
Os02t0518500-00 Rice nucleus 32.52 35.37
Os03t0197800-00 Rice nucleus 35.7 34.6
Os10t0419200-01 Rice nucleus 30.28 34.11
CDY12268 Canola nucleus 28.22 33.86
Os01t0572300-01 Rice nucleus 33.64 33.52
CDY68983 Canola nucleus 23.93 32.74
Os03t0237250-01 Rice plastid 21.87 26.71
Os07t0581366-00 Rice cytosol, nucleus 30.84 26.03
Os08t0467100-01 Rice nucleus 24.11 24.2
Protein Annotations
MapMan:15.5.15Gene3D:3.30.160.60EntrezGene:9272621EMBL:AK101181UniProt:B7ERE7ProteinID:BAH94703.1
ProteinID:BAT09350.1GO:GO:0003674GO:GO:0003676GO:GO:0005488GO:GO:0046872InterPro:IPR013087
EnsemblPlantsGene:Os09g0555700EnsemblPlants:Os09t0555700-02PFAM:PF12171ScanProsite:PS00028PFscan:PS50157PANTHER:PTHR10593
PANTHER:PTHR10593:SF66SMART:SM00355SUPFAM:SSF57667UniParc:UPI000188AE6FRefSeq:XP_015612461.1RefSeq:XP_015612462.1
RefSeq:XP_015612463.1RefSeq:XP_015612465.1RefSeq:XP_015612466.1InterPro:Znf_C2H2_jazInterPro:Znf_C2H2_sfInterPro:Znf_C2H2_type
SEG:seg:::::
Description
indeterminate domain 3Zinc finger, C2H2-type domain containing protein. (Os09t0555700-01);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-02);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-03)
Coordinates
chr9:-:22064474..22070450
Molecular Weight (calculated)
54896.2 Da
IEP (calculated)
9.415
GRAVY (calculated)
-0.460
Length
535 amino acids
Sequence
(BLAST)
001: MAAASSAPFF GLGDTQMPPP QNPTNPALHH HPNPSPAPVA AAAPAPKKKR NQPGNPNPDA EVIALSPRTL MATNRFVCEV CNKGFQREQN LQLHRRGHNL
101: PWKLKQKNPK EARRRVYLCP EPSCVHHDPS RALGDLTGIK KHYCRKHGEK KWRCDKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR DSFITHRAFC
201: DALAQENARM PPIGAGVYGG AGNMTLGLTG MAAPQLPAGF PDQAGQPSAS AGDVLRLGGG SNGASQFDHL MASSSGSSMF RSQGSSSSSF YLANGAAHHA
301: PAQDFGPEDG QSQAGQGSLL HGKPAAFHDL MQLPVQHQQS GNGNLLNLGF FSGSNGGVDQ FNGGAGNGGQ GSIVTSSGLA GNHGGGGGGF PSLYNSSEPA
401: GTLPQMSATA LLQKAAQMGA TTSSYNAGGA GGASSLLRGA SSHGISVGEG PANERSSYQN LIMGSMASGG GGAGFAGSFS GASGFGGAVD DGKLSTRDFL
501: GVGVVQGISG SAAMGPPRHG AAGLHVGSLD PANMN
Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.