Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011223_P002 | Maize | nucleus | 51.02 | 58.55 |
| EES00944 | Sorghum | nucleus | 51.96 | 58.0 |
| Zm00001d044261_P001 | Maize | nucleus | 51.02 | 57.08 |
| HORVU3Hr1G049810.3 | Barley | nucleus | 45.81 | 53.36 |
| TraesCS3D01G209800.1 | Wheat | nucleus | 46.37 | 52.53 |
| TraesCS3A01G205800.1 | Wheat | nucleus | 46.0 | 51.78 |
| TraesCS3B01G237700.1 | Wheat | nucleus | 45.44 | 51.69 |
| Os01t0242200-01 | Rice | nucleus | 37.06 | 47.95 |
| Os01t0195000-01 | Rice | nucleus | 37.99 | 41.89 |
| Os01t0935000-01 | Rice | nucleus | 33.89 | 38.24 |
| Os03t0197800-00 | Rice | nucleus | 37.06 | 36.05 |
| Os02t0518500-00 | Rice | nucleus | 32.22 | 35.16 |
| Os09t0555700-02 | Rice | nucleus | 33.52 | 33.64 |
| Os02t0672100-01 | Rice | nucleus | 38.36 | 33.5 |
| Os04t0566400-02 | Rice | nucleus | 37.99 | 33.28 |
| Os08t0554400-02 | Rice | nucleus | 33.89 | 33.21 |
| Os10t0419200-01 | Rice | nucleus | 28.31 | 32.0 |
| Os03t0237250-01 | Rice | plastid | 21.79 | 26.71 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 28.86 | 24.45 |
| Os08t0467100-01 | Rice | nucleus | 22.91 | 23.08 |
Protein Annotations
| EnsemblPlants:Os01t0572300-01 | EnsemblPlantsGene:Os01g0572300 | EntrezGene:4326304 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF101 |
| PFAM:PF00096 | PFscan:PS50157 | ProteinID:BAS72801.1 | RefSeq:XP_015622202.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0001C7E5A5 | UniProt:A0A0N7KD71 | MapMan:15.5.15 | : |
Description
indeterminate domain 11Zinc finger, C2H2-type domain containing protein. (Os01t0572300-01)
Coordinates
chr1:+:21992992..21996997
Molecular Weight (calculated)
57414.2 Da
IEP (calculated)
7.971
GRAVY (calculated)
-0.703
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MFHHHLQQQQ QQEEEEGGGL FLVEEAAEAA DQQQESSMSN LTSSASTVPP PPPPSSGNNG NNSNKRKRSL PGNPDPEAEV VALSPATLMA TNRFVCEICG
101: KGFQRDQNLQ LHRRGHNLPW KLKQRGSKEA VRKKVYICPE ASCVHHDPSR ALGDLTGIKK HFFRKHGEKK WKCDKCSKKY AVHSDWKAHS KICGTREYKC
201: DCGTIFSRRD SFITHRAFCD ALTEESAKAI GGIPAAMAAP GHHHHHHHHH HQLLFSPPPV MAHHQELAAL QEQQQQQHHQ DVMQSPHQHQ QQQQQRQQLV
301: QQNCGYAVKP EMAPWPTTMP YDHHHPLLQP LCNANAAATA QSSATSAPPT TPQLPAAAAA AHLSATALLQ KAAQMGATIG GAGTGAAGAH YAHMASPAGA
401: GAPAGGSATF GLGLSCLNTH QDGGGGGGNG LIPAGMMGHL ARTASHGRSG EDVAGAGGGG GDGMTRDFLG LRAFSHRDIL LAGFDSSCMG HVNAAAGMAG
501: YEPPPPHHGQ PQHQHQQQQQ QQQGGSNEPW HGMGSHS
101: KGFQRDQNLQ LHRRGHNLPW KLKQRGSKEA VRKKVYICPE ASCVHHDPSR ALGDLTGIKK HFFRKHGEKK WKCDKCSKKY AVHSDWKAHS KICGTREYKC
201: DCGTIFSRRD SFITHRAFCD ALTEESAKAI GGIPAAMAAP GHHHHHHHHH HQLLFSPPPV MAHHQELAAL QEQQQQQHHQ DVMQSPHQHQ QQQQQRQQLV
301: QQNCGYAVKP EMAPWPTTMP YDHHHPLLQP LCNANAAATA QSSATSAPPT TPQLPAAAAA AHLSATALLQ KAAQMGATIG GAGTGAAGAH YAHMASPAGA
401: GAPAGGSATF GLGLSCLNTH QDGGGGGGNG LIPAGMMGHL ARTASHGRSG EDVAGAGGGG GDGMTRDFLG LRAFSHRDIL LAGFDSSCMG HVNAAAGMAG
501: YEPPPPHHGQ PQHQHQQQQQ QQQGGSNEPW HGMGSHS
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.