Factsheet for Os08t0467100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031759_P001	Maize	nucleus	71.11	73.17
Zm00001d005871_P002	Maize	nucleus	59.66	72.11
EES13982	Sorghum	nucleus	71.11	70.71
TraesCS5A01G233700.1	Wheat	nucleus	64.54	70.06
TraesCS5D01G240600.1	Wheat	nucleus	64.54	70.06
TraesCS5B01G232200.1	Wheat	nucleus	64.35	69.72
EER96827	Sorghum	nucleus	65.1	69.54
Zm00001d020683_P001	Maize	nucleus	63.79	68.41
CDX96046	Canola	nucleus	27.95	63.95
GSMUA_Achr7P18610_001	Banana	nucleus	44.47	62.7
GSMUA_Achr5P23130_001	Banana	nucleus	43.34	60.79
GSMUA_Achr6P02490_001	Banana	nucleus	40.9	58.92
GSMUA_Achr3P20220_001	Banana	nucleus	46.53	58.49
Solyc01g005060.2.1	Tomato	nucleus	36.96	58.11
KRH41885	Soybean	nucleus	40.9	57.37
KRH60588	Soybean	nucleus	42.96	57.25
VIT_01s0011g06400.t01	Wine grape	nucleus	45.59	57.18
PGSC0003DMT400079735	Potato	nucleus, plastid	46.72	56.98
GSMUA_Achr10P...	Banana	nucleus	40.53	56.4
Solyc06g072360.2.1	Tomato	nucleus	40.71	55.36
Solyc03g098070.2.1	Tomato	nucleus	36.77	53.85
CDY04204	Canola	nucleus	36.02	53.48
VIT_17s0000g01870.t01	Wine grape	nucleus	45.4	53.19
CDY36123	Canola	nucleus	37.71	53.17
Bra010981.1-P	Field mustard	nucleus	37.71	53.17
PGSC0003DMT400069306	Potato	nucleus	40.9	53.04
AT1G25250.3	Thale cress	nucleus	38.27	52.99
CDY51986	Canola	nucleus	37.52	52.91
CDY60366	Canola	nucleus	37.9	52.74
CDX84974	Canola	nucleus	37.9	52.74
Bra024771.1-P	Field mustard	nucleus	37.71	52.48
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	37.71	52.48
KRH38986	Soybean	nucleus	46.53	52.32
KRH58582	Soybean	nucleus	42.59	51.59
KRH48724	Soybean	nucleus	46.34	51.14
CDY04203	Canola	plastid	36.59	50.65
Bra004050.1-P	Field mustard	nucleus	39.02	50.36
CDY07400	Canola	nucleus	39.02	50.36
KRH42485	Soybean	nucleus	42.4	50.0
Bra004283.1-P	Field mustard	nucleus	38.65	50.0
AT1G68130.1	Thale cress	nucleus	39.02	49.64
GSMUA_Achr10P...	Banana	nucleus	36.96	49.37
Bra017432.1-P	Field mustard	nucleus	40.53	49.09
Bra026624.1-P	Field mustard	nucleus	40.34	49.09
CDY09400	Canola	nucleus	40.34	49.09
AT2G01940.3	Thale cress	nucleus	40.34	48.21
CDY15800	Canola	nucleus	39.96	48.19
CDY63960	Canola	nucleus	40.71	48.12
CDY04102	Canola	nucleus	40.53	48.11
Os03t0237250-01	Rice	plastid	39.4	47.95
CDY17620	Canola	nucleus	39.77	47.75
Bra024841.1-P	Field mustard	nucleus	39.77	47.75
CDY60095	Canola	nucleus	39.21	47.29
Solyc05g054030.2.1	Tomato	nucleus	31.71	44.36
Os01t0242200-01	Rice	nucleus	22.33	28.67
Os01t0935000-01	Rice	nucleus	23.08	25.84
Os01t0195000-01	Rice	nucleus	23.08	25.26
Os10t0419200-01	Rice	nucleus	21.58	24.21
Os09t0555700-02	Rice	nucleus	24.2	24.11
Os02t0518500-00	Rice	nucleus	21.58	23.37
Os03t0197800-00	Rice	nucleus	24.2	23.37
Os08t0554400-02	Rice	nucleus	24.02	23.36
Os01t0572300-01	Rice	nucleus	23.08	22.91
Os04t0566400-02	Rice	nucleus	24.39	21.21
Os02t0672100-01	Rice	nucleus	24.2	20.98
Os07t0581366-00	Rice	cytosol, nucleus	21.76	18.3

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:4345790	EMBL:AK106796	ProteinID:BAD09547.1	ProteinID:BAD10782.1
ProteinID:BAT05805.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087
EnsemblPlantsGene:Os08g0467100	EnsemblPlants:Os08t0467100-01	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF54
UniProt:Q6YSA1	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000023AE64	RefSeq:XP_015649378.1	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

indeterminate domain 12Zinc finger, C2H2 domain containing protein. (Os08t0467100-01);Zinc finger, C2H2 domain containing protein. (Os08t0467100-02)

Coordinates

chr8:+:22971625..22974903

Molecular Weight (calculated)

56429.3 Da

IEP (calculated)

9.515

GRAVY (calculated)

-0.467

Length

533 amino acids

Sequence
(BLAST)

001: MLSSCAPTAV PPQDASGAAT EPFRSLQIAT AGAAAKKKRR PAGTPDPDAE VVSLSPRTLL ESDRYVCEIC NQGFQRDQNL QMHRRRHKVP WKLLKREAGE
101: AARKRVFVCP EPTCLHHDPS HALGDLVGIK KHFRRKHSGH RQWACSRCSK AYAVHSDYKA HLKTCGTRGH TCDCGRVFSR VESFIEHQDA CNAGRPRAAE
201: ASSSPGRGGG VVVGAPAAAS SSQQQQLFAV PASLSRTASS ASPSSDLVVS PVAWPATGGG GPAMVSPRAA APAPAGGSIA AFHHRFTDPA LSPPTPCGGR
301: RGGCHTTHSL ELQLMPPRTT TTCAGGSLGG TPVATAVGYY ASSSPHSPAA ALPSRQPVAD AMRLQLSIGF GGARDDGNNN SSSSSGEVSA SATRLKEAAH
401: EQLRLAMAEK AAADEARAQA KRQAELADQE LATARRMRYQ AQVELSRAHV LRDHAIRQVD ATQLQITCYS CSHKFRARAA AMISSDVASY VSSVVTEGGD
501: AEVDNDGNLH RRRLNADDGM PRGHSRTMAM DLN

Best Arabidopsis Sequence Match ( AT2G01940.1 )
(BLAST)

001: MRTDQVMLSN KNTNTCCVVS SSSSDPFLSS SENGVTTTNT STQKRKRRPA GTPDPDAEVV SLSPRTLLES DRYICEICNQ GFQRDQNLQM HRRRHKVPWK
101: LLKRDNNIEV KKRVYVCPEP TCLHHNPCHA LGDLVGIKKH FRRKHSNHKQ WVCERCSKGY AVQSDYKAHL KTCGTRGHSC DCGRVFSRVE SFIEHQDNCS
201: ARRVHREPPR PPQTAVTVPA CSSRTASTVS TPSSETNYGG TVAVTTPQPL EGRPIHQRIS SSILTNSSNN LNLELQLLPL SSNQNPNQEN QQQKVKEPSH
301: HHNHNHDTTN LNLSIAPSSS YQHYNNFDRI KEIMASEQIM KIAMKEKAYA EEAKREAKRQ REIAENEFAN AKKIRQKAQA ELERAKFLKE QSMKKISSTI
401: MQVTCQTCKG QFQAVAVPAA TADETSLVVS YMSSANTDGE LENGF

Arabidopsis Description

SGR5C2H2-like zinc finger protein [Source:TAIR;Acc:AT2G01940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.