Factsheet for Os07t0581366-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0948200-00
Os03t0433200-00
Os05t0378200-00
Os05t0378500-00
Os06t0211500-00
Os07t0586900-01
Os08t0538700-01
Os11t0124300-01
Os11t0141500-00
Os11t0141550-01
Os11t0141700-00
Os11t0533500-01
Os12t0122000-01
Os12t0138100-00
Os12t0138166-00
Os12t0138200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03840.1	Os11t0124300-01	AT3G54220.1	17785527
AT1G03840.1	Os12t0122000-01	AT3G54220.1	17785527
AT1G03840.1	Os03t0433200-00	AT4G37650.1	17785527
AT1G03840.1	Os07t0586900-01	AT4G37650.1	17785527
AT5G44160.1	Os01t0948200-00	AT1G50420.1	21798944
AT5G44160.1	Os05t0378200-00	AT1G50420.1	21798944
AT5G44160.1	Os05t0378500-00	AT1G50420.1	21798944
AT5G44160.1	Os06t0211500-00	AT1G50420.1	21798944
AT5G44160.1	Os11t0141500-00	AT1G50420.1	21798944
AT5G44160.1	Os11t0141550-01	AT1G50420.1	21798944
AT5G44160.1	Os11t0141700-00	AT1G50420.1	21798944
AT5G44160.1	Os12t0138100-00	AT1G50420.1	21798944
AT5G44160.1	Os12t0138166-00	AT1G50420.1	21798944
AT5G44160.1	Os12t0138200-00	AT1G50420.1	21798944
AT5G44160.1	Os08t0538700-01	AT3G12280.1	22921914
AT5G44160.1	Os11t0533500-01	AT3G12280.1	22921914

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14910	Canola	nucleus	12.78	60.9
TraesCS2B01G218900.1	Wheat	nucleus	74.61	58.98
CDY72283	Canola	nucleus	17.19	57.67
Bra036013.1-P	Field mustard	nucleus	14.35	57.59
EER97442	Sorghum	nucleus	70.5	57.02
Zm00001d006682_P001	Maize	nucleus	66.72	57.01
TraesCS2A01G188400.2	Wheat	nucleus	73.97	56.51
TraesCS2D01G199300.3	Wheat	nucleus	73.82	55.38
Zm00001d021932_P001	Maize	nucleus	69.4	53.99
HORVU2Hr1G036710.3	Barley	nucleus	69.4	50.69
VIT_12s0028g03030.t01	Wine grape	nucleus	27.29	40.52
Os01t0242200-01	Rice	nucleus	25.87	39.52
Os03t0197800-00	Rice	nucleus	32.81	37.68
KRH49655	Soybean	nucleus	21.45	37.57
Bra033724.1-P	Field mustard	nucleus	26.34	35.99
CDY22307	Canola	nucleus	26.34	35.99
KRH22332	Soybean	nucleus	26.81	35.87
AT5G44160.1	Thale cress	nucleus	26.34	35.84
CDX94759	Canola	nucleus	26.03	35.56
KRH25657	Soybean	nucleus	26.34	35.46
KRH26995	Soybean	nucleus	26.81	35.42
KRH55868	Soybean	nucleus	26.34	35.23
Os01t0195000-01	Rice	nucleus	26.5	34.5
Os01t0935000-01	Rice	nucleus	25.71	34.24
CDY18188	Canola	nucleus	25.55	33.82
Bra032541.1-P	Field mustard	nucleus	26.03	33.67
CDY32514	Canola	nucleus	26.03	33.67
Bra015271.1-P	Field mustard	nucleus	25.55	33.61
CDX89862	Canola	nucleus	25.39	33.54
AT1G03840.1	Thale cress	nucleus	26.5	33.2
Os02t0518500-00	Rice	nucleus	25.39	32.72
PGSC0003DMT400024272	Potato	nucleus	25.24	32.32
Os10t0419200-01	Rice	nucleus	23.97	32.0
Solyc07g053570.2.1	Tomato	nucleus	24.92	31.47
Os09t0555700-02	Rice	nucleus	26.03	30.84
Os08t0554400-02	Rice	nucleus	25.87	29.93
Os01t0572300-01	Rice	nucleus	24.45	28.86
Os04t0566400-02	Rice	nucleus	27.44	28.39
Os02t0672100-01	Rice	nucleus	27.44	28.29
Os03t0237250-01	Rice	plastid	19.09	27.63
Os08t0467100-01	Rice	nucleus	18.3	21.76

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	UniProt:A0A0P0X8J6	ProteinID:BAT02339.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	EnsemblPlantsGene:Os07g0581366	EnsemblPlants:Os07t0581366-00	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF29	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000393BCE6
InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:	:

Description

indeterminate domain 5Zinc finger, C2H2 domain containing protein. (Os07t0581366-00)

Coordinates

chr7:+:23540795..23543383

Molecular Weight (calculated)

67132.7 Da

IEP (calculated)

5.914

GRAVY (calculated)

-0.573

Length

634 amino acids

Sequence
(BLAST)

001: GGWSCGGGRS RGDATQSDGD GGGARAGGGA GSGGGGGGAG DPDAEVIALS PGTLLATNRF VCEVCGKGFQ RDQNLQLHRR GHNLPWRLRQ RGPGAAPPRR
101: RVYVCPEPGC VHHNPTRALG DLTGIKKHFC RKHGEKRWTC QRCGKRYAVQ ADLKAHTKTC GTREYRCDCG TLFTRRDSFV THRAFCGALV EETGRVLAVP
201: APPSPRPPDL EAEENVDKDK DKEEEVKEKE KEKELEENED SPVAEVDEPQ PSQAVAEVPQ QCAPSPPPPP PILQEHPQPV VAVVPNVDEQ EVVAKPAVIA
301: KIEVEDERDE EVCFQEVDRY KDAELEDSNL LDNDTPMLPC FLPSPSEAIG TDGSSTSCGT GSSVTNAIAP ATTTSTFAGL FASVTTSSTP QSRSLRDLIG
401: VDPTFLCLAI GAPSSLFPQT NASDPCSFAP PPAPHMSATA LLQKAAEVGA SQSSSSFLKE FGLAASTSSS PPSKLSQGRF TTGNTPTTSH PHPHPHPHPH
501: PPQGRFMDNV PQPPPPAKLP HRMFTDNSVQ QWHHRSNQQM EMEPGPMLPG GLGLGLTYDT GNSGLPDLMM GPSALYGPKP ATLDFLGLGI GGTMGGSTAN
601: GGLPALMVGG ELDMGSAQAP WEEAKRKTNG RTIL

Best Arabidopsis Sequence Match ( AT1G03840.1 )
(BLAST)

001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI

Arabidopsis Description

MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.