Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036013.1-P | Field mustard | nucleus | 96.99 | 81.65 |
| CDY09390 | Canola | nucleus | 60.15 | 67.23 |
| CDY04118 | Canola | nucleus | 60.15 | 67.23 |
| CDY72283 | Canola | nucleus | 83.46 | 58.73 |
| CDY37489 | Canola | nucleus | 72.93 | 52.72 |
| CDY53540 | Canola | nucleus | 72.93 | 50.0 |
| CDY04117 | Canola | nucleus | 72.18 | 44.86 |
| CDY70142 | Canola | nucleus | 54.89 | 40.11 |
| CDX96046 | Canola | nucleus | 60.9 | 34.76 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 78.2 | 29.13 |
| Zm00001d039254_P001 | Maize | nucleus | 70.68 | 26.55 |
| AT5G44160.1 | Thale cress | nucleus | 91.73 | 26.18 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 72.18 | 26.16 |
| CDY22307 | Canola | nucleus | 90.23 | 25.86 |
| CDX94759 | Canola | nucleus | 90.23 | 25.86 |
| Os01t0242200-01 | Rice | nucleus | 78.95 | 25.3 |
| VIT_12s0028g03030.t01 | Wine grape | nucleus | 80.45 | 25.06 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 66.17 | 24.86 |
| GSMUA_Achr10P... | Banana | nucleus | 69.17 | 24.4 |
| CDX97281 | Canola | nucleus, plastid | 69.92 | 24.16 |
| CDY18188 | Canola | nucleus | 84.96 | 23.59 |
| CDX89862 | Canola | nucleus | 84.21 | 23.33 |
| KRH22332 | Soybean | nucleus | 82.71 | 23.21 |
| PGSC0003DMT400024272 | Potato | nucleus | 85.71 | 23.03 |
| CDX91304 | Canola | nucleus, plastid | 69.92 | 23.02 |
| Zm00001d009030_P002 | Maize | nucleus | 76.69 | 22.82 |
| KRH26995 | Soybean | nucleus | 81.95 | 22.71 |
| CDY32514 | Canola | nucleus | 83.46 | 22.65 |
| Solyc07g053570.2.1 | Tomato | nucleus | 84.96 | 22.51 |
| CDX86010 | Canola | nucleus | 75.19 | 22.32 |
| CDY24490 | Canola | nucleus | 72.93 | 22.3 |
| CDX77936 | Canola | nucleus | 72.93 | 22.25 |
| CDY59418 | Canola | nucleus | 68.42 | 22.03 |
| CDX75732 | Canola | nucleus | 72.93 | 21.9 |
| CDY53836 | Canola | nucleus | 74.44 | 21.85 |
| EES02157 | Sorghum | nucleus | 78.2 | 21.62 |
| CDY45271 | Canola | nucleus | 66.92 | 21.39 |
| TraesCS3A01G170700.1 | Wheat | nucleus | 78.2 | 21.27 |
| TraesCS3D01G171300.1 | Wheat | nucleus | 78.2 | 21.18 |
| TraesCS3B01G195900.1 | Wheat | nucleus | 78.2 | 21.18 |
| CDX82515 | Canola | nucleus | 69.92 | 21.09 |
| CDY04203 | Canola | plastid | 60.15 | 20.78 |
| CDY36123 | Canola | nucleus | 58.65 | 20.63 |
| CDY51986 | Canola | nucleus | 58.65 | 20.63 |
| CDY04204 | Canola | nucleus | 55.64 | 20.61 |
| CDY67009 | Canola | nucleus | 73.68 | 20.59 |
| CDX81653 | Canola | nucleus | 72.18 | 20.56 |
| CDX84974 | Canola | nucleus | 58.65 | 20.37 |
| CDY60366 | Canola | nucleus | 58.65 | 20.37 |
| CDY51742 | Canola | nucleus | 73.68 | 20.25 |
| CDX81372 | Canola | nucleus | 74.44 | 20.25 |
| CDY55238 | Canola | nucleus | 73.68 | 20.16 |
| CDY57128 | Canola | nucleus | 74.44 | 20.12 |
| CDY15814 | Canola | nucleus | 71.43 | 20.08 |
| CDX97521 | Canola | nucleus | 72.18 | 19.79 |
| CDY45270 | Canola | nucleus | 66.17 | 19.56 |
| CDY07400 | Canola | nucleus | 60.15 | 19.37 |
| CDY17440 | Canola | nucleus | 68.42 | 19.04 |
| CDY11241 | Canola | nucleus | 70.68 | 18.69 |
| CDX80854 | Canola | nucleus | 69.92 | 18.42 |
| CDY44344 | Canola | nucleus | 69.17 | 18.4 |
| CDY10404 | Canola | nucleus | 69.92 | 18.34 |
| CDY17614 | Canola | nucleus, plastid | 70.68 | 18.32 |
| CDY03080 | Canola | nucleus, plastid | 70.68 | 18.22 |
| CDY03081 | Canola | nucleus | 71.43 | 18.13 |
| CDX70328 | Canola | nucleus | 69.92 | 18.09 |
| CDY17615 | Canola | nucleus | 71.43 | 18.03 |
| CDY09400 | Canola | nucleus | 58.65 | 17.81 |
| CDY17620 | Canola | nucleus | 59.4 | 17.79 |
| CDY15800 | Canola | nucleus | 58.65 | 17.65 |
| CDY60095 | Canola | nucleus | 58.65 | 17.65 |
| CDY04102 | Canola | nucleus | 59.4 | 17.59 |
| CDY63960 | Canola | nucleus | 59.4 | 17.52 |
| CDY09391 | Canola | nucleus | 72.18 | 16.93 |
| CDY15811 | Canola | nucleus | 72.18 | 16.9 |
| CDY12268 | Canola | nucleus | 46.62 | 13.9 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 60.9 | 12.78 |
| Zm00001d006682_P001 | Maize | nucleus | 70.68 | 12.67 |
| EER97442 | Sorghum | nucleus | 69.92 | 11.86 |
| CDY68983 | Canola | nucleus | 34.59 | 11.76 |
| TraesCS2B01G218900.1 | Wheat | nucleus | 69.17 | 11.47 |
| Zm00001d021932_P001 | Maize | nucleus | 69.92 | 11.41 |
| TraesCS2A01G188400.2 | Wheat | nucleus | 69.17 | 11.08 |
| TraesCS2D01G199300.3 | Wheat | nucleus | 69.17 | 10.89 |
| CDY70938 | Canola | cytosol, nucleus | 16.54 | 8.06 |
| HORVU2Hr1G036710.3 | Barley | nucleus | 51.88 | 7.95 |
| CDY67587 | Canola | cytosol, nucleus | 12.03 | 7.11 |
Protein Annotations
| EnsemblPlants:CDY14910 | EnsemblPlantsGene:GSBRNA2T00084829001 | GO:A0A078FKE1 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF26 | ProteinID:CDY14910 |
| ProteinID:CDY14910.1 | UniParc:UPI0004EE77AA | UniProt:A0A078FKE1 | MapMan:15.5.15 | : | : |
Description
BnaA02g22520DBnaA02g22520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKE1]
Coordinates
chrLK032048:+:426466..427301
Molecular Weight (calculated)
15452.6 Da
IEP (calculated)
10.142
GRAVY (calculated)
-1.047
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDESLINPP PVKKKRNLPE NPDPEAEVIA LDQNLQLHRR GHNLPSKLKQ RTSKEVRKRV YVCPEQTCVH HHSSRALGDL TGIKKHFCRK HSEKKWKCEK
101: CAKRYAVLSD YKAHSKTCGT REYRCDCGTI FSR
101: CAKRYAVLSD YKAHSKTCGT REYRCDCGTI FSR
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.