Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023223.1-P | Field mustard | plastid | 99.1 | 92.08 |
| CDY68983 | Canola | nucleus | 80.27 | 91.56 |
| CDY04118 | Canola | nucleus | 16.37 | 61.34 |
| CDY09390 | Canola | nucleus | 15.92 | 59.66 |
| CDY53540 | Canola | nucleus | 22.87 | 52.58 |
| CDY37489 | Canola | nucleus | 19.28 | 46.74 |
| CDY14910 | Canola | nucleus | 13.9 | 46.62 |
| CDY72283 | Canola | nucleus | 19.51 | 46.03 |
| CDY04117 | Canola | nucleus | 21.97 | 45.79 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.04 | 36.81 |
| KRG89168 | Soybean | nucleus, plastid | 28.7 | 36.78 |
| CDY45271 | Canola | nucleus | 34.08 | 36.54 |
| CDY70142 | Canola | nucleus | 14.8 | 36.26 |
| CDY45270 | Canola | nucleus | 34.53 | 34.22 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 31.61 | 33.1 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 28.48 | 31.91 |
| CDY59418 | Canola | nucleus | 29.15 | 31.48 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 32.51 | 31.05 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 30.04 | 30.88 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 33.86 | 30.82 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 32.74 | 30.04 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 31.61 | 29.81 |
| CDX81653 | Canola | nucleus | 30.94 | 29.55 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 32.06 | 29.24 |
| CDX97281 | Canola | nucleus, plastid | 25.11 | 29.09 |
| CDX86010 | Canola | nucleus | 29.15 | 29.02 |
| KRH49489 | Soybean | nucleus, plastid | 34.53 | 28.89 |
| GSMUA_Achr10P... | Banana | nucleus | 30.94 | 28.81 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 36.77 | 28.67 |
| CDY53836 | Canola | nucleus | 28.92 | 28.48 |
| KRG90705 | Soybean | nucleus | 36.1 | 28.4 |
| CDX96046 | Canola | nucleus | 14.8 | 28.33 |
| AT1G14580.3 | Thale cress | nucleus | 30.49 | 28.27 |
| CDY17440 | Canola | nucleus | 30.27 | 28.24 |
| Os09t0555700-02 | Rice | nucleus | 33.86 | 28.22 |
| CDY24490 | Canola | nucleus | 27.35 | 28.05 |
| KRH49485 | Soybean | nucleus | 34.08 | 27.99 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 34.08 | 27.89 |
| KRH36039 | Soybean | nucleus | 35.65 | 27.85 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 34.08 | 27.84 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 34.08 | 27.79 |
| CDX77936 | Canola | nucleus | 27.13 | 27.75 |
| GSMUA_Achr11P... | Banana | nucleus | 32.96 | 27.58 |
| CDY15814 | Canola | nucleus | 29.15 | 27.48 |
| CDX91304 | Canola | nucleus, plastid | 24.89 | 27.48 |
| PGSC0003DMT400075837 | Potato | nucleus | 31.84 | 27.41 |
| Solyc04g008500.2.1 | Tomato | nucleus | 31.61 | 27.27 |
| KRG91985 | Soybean | nucleus | 34.08 | 27.14 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 33.18 | 27.06 |
| KRH34792 | Soybean | nucleus | 33.63 | 27.03 |
| KRG89167 | Soybean | nucleus, plastid | 33.18 | 26.96 |
| CDY17614 | Canola | nucleus, plastid | 30.94 | 26.9 |
| Zm00001d021403_P001 | Maize | nucleus | 29.15 | 26.86 |
| CDY17615 | Canola | nucleus | 31.39 | 26.57 |
| CDY03081 | Canola | nucleus | 31.17 | 26.53 |
| OQU89911 | Sorghum | nucleus, plastid | 31.61 | 26.45 |
| CDY03080 | Canola | nucleus, plastid | 30.49 | 26.36 |
| GSMUA_Achr11P... | Banana | nucleus | 33.41 | 26.33 |
| CDY15811 | Canola | nucleus | 33.41 | 26.23 |
| CDY09391 | Canola | nucleus | 32.96 | 25.93 |
| GSMUA_Achr11P... | Banana | nucleus | 29.37 | 25.64 |
| CDY67009 | Canola | nucleus | 26.91 | 25.21 |
| Os08t0554400-02 | Rice | nucleus | 30.94 | 25.18 |
| CDX81372 | Canola | nucleus | 27.35 | 24.95 |
| CDY18188 | Canola | nucleus | 26.68 | 24.84 |
| CDX94759 | Canola | nucleus | 25.78 | 24.78 |
| CDY22307 | Canola | nucleus | 25.78 | 24.78 |
| CDX75732 | Canola | nucleus | 24.44 | 24.61 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 27.58 | 24.6 |
| CDX89862 | Canola | nucleus | 26.46 | 24.58 |
| CDY32514 | Canola | nucleus | 26.91 | 24.49 |
| KXG25416 | Sorghum | nucleus | 30.27 | 24.41 |
| CDY57128 | Canola | nucleus | 26.91 | 24.39 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 31.39 | 24.31 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 31.39 | 24.22 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 31.39 | 24.22 |
| CDX82515 | Canola | nucleus | 23.77 | 24.04 |
| EES11271 | Sorghum | nucleus | 32.06 | 23.87 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 32.51 | 23.69 |
| Os04t0566400-02 | Rice | nucleus | 32.51 | 23.65 |
| Zm00001d026113_P006 | Maize | nucleus | 31.61 | 23.54 |
| CDX97521 | Canola | nucleus | 25.56 | 23.51 |
| CDY11241 | Canola | nucleus | 26.23 | 23.26 |
| CDY55238 | Canola | nucleus | 25.34 | 23.25 |
| Zm00001d017560_P001 | Maize | nucleus | 30.27 | 23.2 |
| Os02t0672100-01 | Rice | nucleus | 31.84 | 23.09 |
| CDY51742 | Canola | nucleus | 24.89 | 22.93 |
| CDY44344 | Canola | nucleus | 25.56 | 22.8 |
| CDX80854 | Canola | nucleus | 25.78 | 22.77 |
| KXG31026 | Sorghum | nucleus | 30.27 | 22.69 |
| CDY10404 | Canola | nucleus | 25.78 | 22.68 |
| Zm00001d031992_P001 | Maize | nucleus | 30.49 | 22.48 |
| CDX70328 | Canola | nucleus | 25.78 | 22.37 |
| Zm00001d002654_P003 | Maize | nucleus | 31.61 | 22.27 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 32.74 | 22.05 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 32.74 | 22.02 |
| Zm00001d006319_P001 | Maize | nucleus | 27.13 | 21.65 |
| KXG36163 | Sorghum | nucleus | 27.8 | 21.31 |
| CDX84974 | Canola | nucleus | 18.16 | 21.15 |
| CDY60366 | Canola | nucleus | 17.94 | 20.89 |
| CDY36123 | Canola | nucleus | 17.26 | 20.37 |
| CDY51986 | Canola | nucleus | 17.26 | 20.37 |
| CDY04204 | Canola | nucleus | 16.37 | 20.33 |
| CDY04203 | Canola | plastid | 16.37 | 18.96 |
| CDY17620 | Canola | nucleus | 18.61 | 18.69 |
| CDY09400 | Canola | nucleus | 18.16 | 18.49 |
| CDY07400 | Canola | nucleus | 17.04 | 18.4 |
| CDY60095 | Canola | nucleus | 18.16 | 18.33 |
| CDY15800 | Canola | nucleus | 17.94 | 18.1 |
| CDY04102 | Canola | nucleus | 18.16 | 18.04 |
| CDY63960 | Canola | nucleus | 18.16 | 17.96 |
| CDY67587 | Canola | cytosol, nucleus | 8.52 | 16.89 |
| CDY70938 | Canola | cytosol, nucleus | 10.09 | 16.48 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078FJJ0 | UniProt:A0A078FJJ0 | EnsemblPlants:CDY12268 | ProteinID:CDY12268 |
| ProteinID:CDY12268.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00061321001 | InterPro:IPR013087 |
| PFAM:PF12874 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EECD07 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
BnaA09g24680DBnaA09g24680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJJ0]
Coordinates
chrLK032019:-:267767..271213
Molecular Weight (calculated)
49015.0 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.850
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSYSQSIP LIATGANNFN QKEMEMTMTQ KCNTFVSPSL RKQRNQPGNR NPDAEVIALS PKTIMATNRF LCEVCNRGFN REQNLQLHGR VHNLPWKPKQ
101: KSEKEARRKK HYYRKHGEKQ WKCDKCPKSY ALQSDWKTHS KICGIKVHRC DCGTTFSRRE NYNAHKALCD ALNQESGRNP TGSITNMAAA AGGSDGRQDF
201: YGGAASALGR LQDFYAYFYG GAASALGRHG FYRGAASALS HNQFGNNSNT GYNLNRSSSN KFEGFVPHPT NPNPGPTNFP MQCPSNQASL VHNDQSLRSQ
301: HDLISLGARI NNNNNNTNHG YFQNNTKTSN QTLFAHGADI NDPSVWQRGL TPSSSSGVVV NGFGDNDKGN LQGWMNSLAM TTNQQGWSAS NIFGPHFGNN
401: LSMGGSDVLT LGVNGGSVSK GRGDRNPAPL DTQMKFAYPN RPFGNP
101: KSEKEARRKK HYYRKHGEKQ WKCDKCPKSY ALQSDWKTHS KICGIKVHRC DCGTTFSRRE NYNAHKALCD ALNQESGRNP TGSITNMAAA AGGSDGRQDF
201: YGGAASALGR LQDFYAYFYG GAASALGRHG FYRGAASALS HNQFGNNSNT GYNLNRSSSN KFEGFVPHPT NPNPGPTNFP MQCPSNQASL VHNDQSLRSQ
301: HDLISLGARI NNNNNNTNHG YFQNNTKTSN QTLFAHGADI NDPSVWQRGL TPSSSSGVVV NGFGDNDKGN LQGWMNSLAM TTNQQGWSAS NIFGPHFGNN
401: LSMGGSDVLT LGVNGGSVSK GRGDRNPAPL DTQMKFAYPN RPFGNP
001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.