Factsheet for GSMUA_AchrUn_randomP09270_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04118	Canola	nucleus	21.27	87.39
CDY09390	Canola	nucleus	20.86	85.71
GSMUA_Achr10P...	Banana	nucleus	60.12	61.38
GSMUA_Achr1P07110_001	Banana	nucleus	60.33	60.7
CDY53540	Canola	nucleus	23.93	60.31
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	58.9	58.78
GSMUA_Achr4P04310_001	Banana	nucleus	56.65	58.56
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	43.56	58.52
CDY04117	Canola	nucleus	25.36	57.94
GSMUA_Achr9P23870_001	Banana	nucleus	50.92	57.37
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	43.76	53.77
KRG89168	Soybean	nucleus, plastid	36.2	50.86
GSMUA_Achr1P02080_001	Banana	nucleus	55.21	49.36
GSMUA_Achr3P13990_001	Banana	nucleus	42.74	49.06
GSMUA_Achr2P16690_001	Banana	nucleus	36.2	48.1
GSMUA_Achr1P17940_001	Banana	nucleus	45.81	47.97
GSMUA_Achr7P14780_001	Banana	nucleus	34.56	47.34
GSMUA_Achr6P27030_001	Banana	nucleus	33.54	46.33
VIT_01s0010g02100.t01	Wine grape	nucleus	53.99	46.15
KRG91985	Soybean	nucleus	52.35	45.71
GSMUA_Achr3P25410_001	Banana	nucleus	30.47	45.71
GSMUA_Achr2P08460_001	Banana	nucleus	29.24	45.4
GSMUA_Achr9P06650_001	Banana	nucleus	33.95	45.23
KRH34792	Soybean	nucleus	51.33	45.23
GSMUA_Achr7P13540_001	Banana	nucleus	32.92	44.11
KRG90705	Soybean	nucleus	51.12	44.09
GSMUA_Achr10P...	Banana	nucleus	33.74	43.77
GSMUA_Achr5P22140_001	Banana	nucleus	33.95	43.57
KRH49485	Soybean	nucleus	48.26	43.46
KRH36039	Soybean	nucleus	50.51	43.26
Os09t0555700-02	Rice	nucleus	47.03	42.99
KRG89167	Soybean	nucleus, plastid	47.85	42.62
GSMUA_Achr7P09150_001	Banana	nucleus	34.97	41.71
GSMUA_Achr2P08910_001	Banana	nucleus	32.52	41.3
KRH49489	Soybean	nucleus, plastid	44.99	41.28
TraesCS5B01G358600.1	Wheat	nucleus, plastid	45.81	41.03
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	55.42	41.0
TraesCS5A01G356100.1	Wheat	nucleus, plastid	45.6	40.92
TraesCS5D01G364900.1	Wheat	nucleus, plastid	45.4	40.59
GSMUA_Achr11P...	Banana	nucleus	46.83	40.46
PGSC0003DMT400075837	Potato	nucleus	42.54	40.15
GSMUA_Achr10P...	Banana	nucleus	36.61	39.87
Solyc04g008500.2.1	Tomato	nucleus	42.13	39.85
GSMUA_Achr4P05240_001	Banana	nucleus	40.7	39.8
CDY59418	Canola	nucleus	32.72	38.74
GSMUA_Achr8P10040_001	Banana	nucleus	34.97	38.26
CDY45271	Canola	nucleus	32.52	38.22
GSMUA_Achr7P22720_001	Banana	mitochondrion	21.88	38.08
CDY17440	Canola	nucleus	36.61	37.45
GSMUA_Achr11P...	Banana	nucleus	40.49	37.15
CDY45270	Canola	nucleus	33.95	36.89
GSMUA_Achr11P...	Banana	nucleus	38.45	36.79
Bra026204.1-P	Field mustard	nucleus, plastid	33.74	36.67
CDY03081	Canola	nucleus	39.26	36.64
GSMUA_Achr5P06450_001	Banana	nucleus	35.58	36.55
CDY17615	Canola	nucleus	38.85	36.05
GSMUA_Achr11P...	Banana	nucleus	29.86	35.27
CDY15814	Canola	nucleus	33.95	35.1
CDY09391	Canola	nucleus	40.29	34.74
AT2G02080.3	Thale cress	nucleus, plastid	36.61	34.69
CDY15811	Canola	nucleus	40.29	34.68
Bra026819.1-P	Field mustard	nucleus	32.92	34.48
Bra024834.1-P	Field mustard	nucleus, plastid	38.85	34.42
Bra026203.1-P	Field mustard	nucleus, plastid	32.52	34.27
CDX81653	Canola	nucleus	32.72	34.26
Bra026616.1-P	Field mustard	nucleus	35.79	34.25
CDY17614	Canola	nucleus, plastid	35.58	33.92
Bra023223.1-P	Field mustard	plastid	33.13	33.75
Bra024833.1-P	Field mustard	plastid	35.38	33.72
Bra026617.1-P	Field mustard	nucleus	40.29	33.39
CDY03080	Canola	nucleus, plastid	35.17	33.33
AT1G14580.3	Thale cress	nucleus	32.72	33.26
Bra040974.1-P	Field mustard	nucleus, plastid	39.67	33.16
GSMUA_Achr4P07200_001	Banana	nucleus	36.61	33.15
GSMUA_Achr4P14030_001	Banana	nucleus	36.61	32.97
AT2G02070.2	Thale cress	nucleus	40.08	32.56
CDY68983	Canola	nucleus	25.97	32.48
GSMUA_Achr7P24170_001	Banana	nucleus	32.92	32.07
CDY12268	Canola	nucleus	29.24	32.06
GSMUA_Achr3P29940_001	Banana	nucleus	37.22	31.33
GSMUA_Achr7P25960_001	Banana	nucleus	37.63	31.08
GSMUA_Achr7P18610_001	Banana	nucleus	23.11	29.89
GSMUA_Achr6P02490_001	Banana	nucleus	22.29	29.46
GSMUA_Achr5P23130_001	Banana	nucleus	22.49	28.95
GSMUA_Achr10P...	Banana	nucleus	22.49	28.72
GSMUA_Achr3P20220_001	Banana	nucleus	22.9	26.42
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	20.45	26.11
GSMUA_Achr10P...	Banana	nucleus	20.86	25.56
GSMUA_AchrUn_...	Banana	nucleus	35.58	19.57

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP09270_001	EnsemblPlants:GSMUA_AchrUn_randomT09270_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG09270_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0046872	InterPro:IPR013087	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
PANTHER:PTHR10593	PANTHER:PTHR10593:SF66	PFAM:PF12171	PFscan:PS50157	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000296B8F2	UniProt:M0U7N7	MapMan:15.5.15	:

Description

ZOS9-17 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09270_001]

Coordinates

chrchrUn_random:-:43050239..43053752

Molecular Weight (calculated)

53381.1 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.576

Length

489 amino acids

Sequence
(BLAST)

001: MISTATSKRQ ARPQLLLLPR RRGTSLETQA NPDAEVIALS PKTLLATNRF VCEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KNPNEVRRRV YLCPELTCVH
101: HDPSRALGDL TGIKKHYCRK HGEKKWKCDR CSKRYAVQSD WKAHSKICGT REYRCDCGTL FSRRDSFITH RAFCDALAQE GARIPAGMNT IGGHVYANRG
201: TNLDLPQLSS QLSSLQDQAH HPSTDLLRLR GSSGSAKFEQ LNATTSPFYL GAASNQGFDE NPELLPSKPF HAMMQLQDLQ TNNSASSSAA AAANLFNLGF
301: FSSSGSTSGG TEPMSLFTGE LMSDHTDTNM PSLYTPSLHT EPVVPQMSAT ALLQKAAQMG ATPIGASGSS LLGEFSGSYP GGARHVGFRR NPKEGGGESS
401: RTHVDDENHF QYIMNSLANG NSGVFSGMDE QVSSGILTRD FLGVGNMMRS MGGGIPPREQ QLGIDMDSLD HSEMKPGSST RSFGGGRLQ

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.