Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 79.1 | 78.07 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 72.49 | 74.05 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 73.55 | 73.16 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 79.89 | 71.23 |
| CDX96046 | Canola | nucleus | 38.62 | 62.66 |
| Solyc01g005060.2.1 | Tomato | nucleus | 53.44 | 59.59 |
| KRH41885 | Soybean | nucleus | 53.97 | 53.68 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 60.32 | 53.65 |
| KRH60588 | Soybean | nucleus | 56.61 | 53.5 |
| PGSC0003DMT400079735 | Potato | nucleus, plastid | 61.38 | 53.09 |
| CDX84974 | Canola | nucleus | 53.17 | 52.48 |
| Bra024771.1-P | Field mustard | nucleus | 52.91 | 52.22 |
| CDY60366 | Canola | nucleus | 52.91 | 52.22 |
| Bra010981.1-P | Field mustard | nucleus | 52.12 | 52.12 |
| CDY51986 | Canola | nucleus | 52.12 | 52.12 |
| CDY36123 | Canola | nucleus | 52.12 | 52.12 |
| AT1G25250.3 | Thale cress | nucleus | 52.91 | 51.95 |
| Zm00001d005871_P002 | Maize | nucleus | 60.32 | 51.7 |
| KRH58582 | Soybean | nucleus | 60.05 | 51.59 |
| CDY04204 | Canola | nucleus | 48.94 | 51.53 |
| VIT_17s0000g01870.t01 | Wine grape | nucleus | 61.11 | 50.77 |
| Solyc06g072360.2.1 | Tomato | nucleus | 52.38 | 50.51 |
| Solyc03g098070.2.1 | Tomato | nucleus | 48.15 | 50.0 |
| KRH42485 | Soybean | nucleus | 59.52 | 49.78 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 64.29 | 49.49 |
| CDY04203 | Canola | plastid | 50.26 | 49.35 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 50.0 | 49.35 |
| Bra017432.1-P | Field mustard | nucleus | 57.41 | 49.32 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 64.02 | 49.29 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 64.02 | 49.19 |
| AT1G68130.1 | Thale cress | nucleus | 54.5 | 49.16 |
| GSMUA_Achr10P... | Banana | nucleus | 51.85 | 49.12 |
| Zm00001d020683_P001 | Maize | nucleus | 64.29 | 48.89 |
| Bra026624.1-P | Field mustard | nucleus | 56.61 | 48.86 |
| CDY09400 | Canola | nucleus | 56.61 | 48.86 |
| KRH38986 | Soybean | nucleus | 60.85 | 48.52 |
| AT2G01940.3 | Thale cress | nucleus | 57.14 | 48.43 |
| PGSC0003DMT400069306 | Potato | nucleus | 52.65 | 48.42 |
| CDY63960 | Canola | nucleus | 57.67 | 48.34 |
| CDY04102 | Canola | nucleus | 57.41 | 48.33 |
| EER96827 | Sorghum | nucleus | 63.76 | 48.3 |
| CDY07400 | Canola | nucleus | 52.65 | 48.18 |
| Bra004050.1-P | Field mustard | nucleus | 52.65 | 48.18 |
| Bra004283.1-P | Field mustard | nucleus | 52.38 | 48.06 |
| Bra024841.1-P | Field mustard | nucleus | 56.35 | 47.97 |
| CDY17620 | Canola | nucleus | 56.35 | 47.97 |
| CDY15800 | Canola | nucleus | 56.08 | 47.96 |
| KRH48724 | Soybean | nucleus | 60.85 | 47.62 |
| CDY60095 | Canola | nucleus | 55.56 | 47.51 |
| Zm00001d031759_P001 | Maize | nucleus | 64.55 | 47.1 |
| EES13982 | Sorghum | nucleus | 63.76 | 44.96 |
| Solyc05g054030.2.1 | Tomato | nucleus | 45.24 | 44.88 |
| Os08t0467100-01 | Rice | nucleus | 62.7 | 44.47 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 29.1 | 34.92 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 29.37 | 34.05 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 31.75 | 33.61 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 24.07 | 32.38 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 30.95 | 31.79 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.42 | 31.59 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 30.16 | 31.23 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 30.95 | 30.39 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 30.16 | 29.92 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 28.57 | 29.43 |
| GSMUA_Achr10P... | Banana | nucleus | 28.31 | 28.38 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 30.69 | 28.29 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 26.19 | 27.97 |
| GSMUA_Achr10P... | Banana | nucleus | 32.54 | 27.39 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 30.16 | 26.76 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 31.48 | 26.62 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 27.78 | 26.38 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 32.54 | 26.34 |
| GSMUA_Achr11P... | Banana | nucleus | 28.57 | 26.09 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 31.22 | 24.79 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 31.48 | 24.49 |
| GSMUA_Achr10P... | Banana | nucleus | 30.95 | 24.43 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 32.01 | 24.1 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 29.89 | 23.11 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 26.45 | 23.04 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 33.07 | 23.02 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 29.37 | 22.65 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 32.28 | 22.59 |
| GSMUA_Achr11P... | Banana | nucleus | 31.75 | 22.51 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 34.13 | 22.2 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 27.78 | 22.2 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 34.66 | 22.13 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 29.1 | 22.0 |
| GSMUA_Achr11P... | Banana | nucleus | 29.63 | 21.92 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 31.22 | 21.57 |
| GSMUA_Achr11P... | Banana | nucleus | 30.16 | 20.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.75 | 13.5 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P18610_001 | EnsemblPlants:GSMUA_Achr7T18610_001 | EnsemblPlantsGene:GSMUA_Achr7G18610_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF43 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000296B9FC | UniProt:M0TIP8 | MapMan:15.5.15 | : | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G18610_001]
Coordinates
chr7:+:21394191..21396188
Molecular Weight (calculated)
42669.5 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.813
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGSPSPAPP PLLGGTTVSS PAPQPFSSPH NATNTKKKRR PAGTPDPDAE VVSLSPRTLL ESDRYVCEIC NQGFQRDQNL QMHRRRHKVP WKLLKREASE
101: VRKRVFVCPE PTCLHHDPCH ALGDLVGIKK HFRRKHSSHR QWVCAKCSKA YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV ESFIEHQDTC TAGRARAELH
201: ITPNPAAALF LTRPDQPSSS QQDQHRTQNI ELQLLPPSNN QQSALHSADT QLASTRLKDE TMEQLKLAMA EKALADEARQ QARRQLELAE REFENAKRIR
301: QQAQMELNRA HAIRERAVKQ INSTLLQITC FACRQQFRAK PGMASEENSF VVSYMSSVVT EGEEENEEHN HPEKVSKS
101: VRKRVFVCPE PTCLHHDPCH ALGDLVGIKK HFRRKHSSHR QWVCAKCSKA YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV ESFIEHQDTC TAGRARAELH
201: ITPNPAAALF LTRPDQPSSS QQDQHRTQNI ELQLLPPSNN QQSALHSADT QLASTRLKDE TMEQLKLAMA EKALADEARQ QARRQLELAE REFENAKRIR
301: QQAQMELNRA HAIRERAVKQ INSTLLQITC FACRQQFRAK PGMASEENSF VVSYMSSVVT EGEEENEEHN HPEKVSKS
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.