Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P25410_001 | Banana | nucleus | 66.23 | 78.22 |
| KRH67268 | Soybean | nucleus | 41.56 | 61.3 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 40.26 | 49.21 |
| TraesCS6D01G116300.1 | Wheat | nucleus | 51.43 | 48.53 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 44.68 | 48.18 |
| TraesCS6B01G154000.1 | Wheat | nucleus | 51.17 | 48.17 |
| TraesCS6A01G126000.1 | Wheat | nucleus | 51.95 | 47.85 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 44.68 | 46.74 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 43.12 | 45.48 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 42.08 | 44.51 |
| CDX97281 | Canola | nucleus, plastid | 44.42 | 44.42 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 43.9 | 44.36 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 41.82 | 43.87 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 45.71 | 42.93 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 38.96 | 42.37 |
| Bra018535.1-P | Field mustard | plastid | 44.42 | 42.33 |
| AT4G02670.2 | Thale cress | nucleus, plastid | 43.9 | 41.83 |
| CDX91304 | Canola | nucleus, plastid | 43.9 | 41.83 |
| GSMUA_Achr10P... | Banana | nucleus | 40.78 | 41.64 |
| KRG95590 | Soybean | nucleus | 49.35 | 41.3 |
| GSMUA_Achr10P... | Banana | nucleus | 47.79 | 40.98 |
| VIT_00s0179g00170.t01 | Wine grape | nucleus, plastid | 46.75 | 40.63 |
| Os10t0419200-01 | Rice | nucleus | 50.13 | 40.63 |
| KRH32064 | Soybean | nucleus | 47.53 | 39.52 |
| KRH71370 | Soybean | nucleus | 47.01 | 39.52 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 28.83 | 39.5 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 43.64 | 39.44 |
| KXG38489 | Sorghum | nucleus | 43.38 | 39.02 |
| Solyc09g065670.2.1 | Tomato | nucleus | 47.01 | 38.51 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 39.74 | 38.44 |
| Zm00001d032922_P001 | Maize | nucleus | 43.12 | 38.07 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 47.01 | 38.03 |
| PGSC0003DMT400049788 | Potato | nucleus | 46.49 | 37.53 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 43.38 | 37.36 |
| GSMUA_Achr11P... | Banana | nucleus | 40.0 | 37.2 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 44.68 | 36.83 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 45.45 | 36.01 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 40.52 | 35.94 |
| GSMUA_Achr10P... | Banana | nucleus | 44.16 | 35.49 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 44.68 | 35.1 |
| GSMUA_Achr11P... | Banana | nucleus | 46.23 | 33.4 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 40.52 | 32.98 |
| GSMUA_Achr11P... | Banana | nucleus | 43.64 | 32.88 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 46.23 | 32.78 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 41.3 | 32.52 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 42.34 | 32.47 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 44.16 | 31.48 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 44.68 | 31.44 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 40.78 | 31.4 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 47.01 | 31.15 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 30.39 | 30.95 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 47.27 | 30.74 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 28.57 | 29.73 |
| GSMUA_Achr10P... | Banana | nucleus | 29.35 | 29.5 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 29.09 | 29.47 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 28.57 | 28.72 |
| GSMUA_Achr11P... | Banana | nucleus | 42.08 | 28.62 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 30.13 | 27.36 |
| GSMUA_Achr10P... | Banana | nucleus | 28.05 | 27.07 |
| CDY67587 | Canola | cytosol, nucleus | 15.58 | 26.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.23 | 20.02 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P08910_001 | EnsemblPlants:GSMUA_Achr2T08910_001 | EnsemblPlantsGene:GSMUA_Achr2G08910_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013087 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| PANTHER:PTHR10593 | PANTHER:PTHR10593:SF49 | PFAM:PF12171 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000294E4DE | UniProt:M0S6D2 | MapMan:15.5.15 | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_179.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G08910_001]
Coordinates
chr2:+:12772870..12775549
Molecular Weight (calculated)
42051.6 Da
IEP (calculated)
8.507
GRAVY (calculated)
-0.520
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSSSAAAA ASNSTSISEE ASVSSETRFH VGFSSSLAPS SPHHQPQQPP PKTRKKRSQP GNPDPDAEVV ALSPNTLMAT NRFICEICNK GFQRDQNLQL
101: HRRGHNLPWK LRQRSSKEVA RKRVYVCPEP SCVHHHPSRA LGDLTGIKKH FSRKHGEKRW KCDKCSKRYA VHSDWKAHVK TCGTKEYRCD CGTLFSRKDS
201: FITHRAFCDA LAEESARLMS AAVTTSPPLH QPLFLPFSSW HPTTSSNPNL ILNPSHDPDI GALQIKPAEN DLPSLVHHLP TGTSTSAHLS ATALLQRAST
301: MGAMSFTNTV SGQGYDGMMV GDVAAFPMWQ NGHRLTRDFL GVAAGEAGDE DDDLLLDLVA ASSCAPMGDP TKQLSGFPPV TGPWD
101: HRRGHNLPWK LRQRSSKEVA RKRVYVCPEP SCVHHHPSRA LGDLTGIKKH FSRKHGEKRW KCDKCSKRYA VHSDWKAHVK TCGTKEYRCD CGTLFSRKDS
201: FITHRAFCDA LAEESARLMS AAVTTSPPLH QPLFLPFSSW HPTTSSNPNL ILNPSHDPDI GALQIKPAEN DLPSLVHHLP TGTSTSAHLS ATALLQRAST
301: MGAMSFTNTV SGQGYDGMMV GDVAAFPMWQ NGHRLTRDFL GVAAGEAGDE DDDLLLDLVA ASSCAPMGDP TKQLSGFPPV TGPWD
001: MDMFSSHSLS YKLSSLSTEA SASSGNNTLS TIQEFSGFHN VISSVCTHTE THKPKKKRGL PGNPDPDAEV IALSPKTLLA TNRFVCEICN KGFQRDQNLQ
101: LHRRGHNLPW KLKQKNTKEQ QKKKVYVCPE TNCAHHHPSR ALGDLTGIKK HFCRKHGEKK WKCEKCSKFY AVQSDWKAHT KICGTRDYRC DCGTLFSRKD
201: TFITHRAFCD ALAEESARLH STSSSNLTNP NPNFQGHHFM FNKSSSLLFT SSPLFIEPSL STAALSTPPT AALSATALLQ KATSLSSTTF GGGGQTRSIG
301: HHRHLTNVNE FLGVDRVMMT SASSSEYDQL VVDGFTSTWQ KADRLTRDFL GLTGHGGHVS VRPGDMLEYA GGVAFPMSAY DTESHDHSFQ KAYDHLGFSG
401: AHRM
101: LHRRGHNLPW KLKQKNTKEQ QKKKVYVCPE TNCAHHHPSR ALGDLTGIKK HFCRKHGEKK WKCEKCSKFY AVQSDWKAHT KICGTRDYRC DCGTLFSRKD
201: TFITHRAFCD ALAEESARLH STSSSNLTNP NPNFQGHHFM FNKSSSLLFT SSPLFIEPSL STAALSTPPT AALSATALLQ KATSLSSTTF GGGGQTRSIG
301: HHRHLTNVNE FLGVDRVMMT SASSSEYDQL VVDGFTSTWQ KADRLTRDFL GLTGHGGHVS VRPGDMLEYA GGVAFPMSAY DTESHDHSFQ KAYDHLGFSG
401: AHRM
Arabidopsis Description
AtIDD12Indeterminate(ID)-domain 12 [Source:UniProtKB/TrEMBL;Acc:A0A1P8B4I0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.