Factsheet for GSMUA_Achr5P06450_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P08460_001	Banana	nucleus	37.6	56.83
GSMUA_Achr2P16690_001	Banana	nucleus	43.7	56.52
GSMUA_Achr7P13540_001	Banana	nucleus	41.6	54.25
GSMUA_Achr7P14780_001	Banana	nucleus	39.08	52.1
GSMUA_Achr5P22140_001	Banana	nucleus	41.6	51.97
GSMUA_Achr3P25410_001	Banana	nucleus	34.45	50.31
GSMUA_Achr10P...	Banana	nucleus	46.64	49.44
GSMUA_Achr7P09150_001	Banana	nucleus	42.44	49.27
GSMUA_Achr2P08910_001	Banana	nucleus	38.03	47.01
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	35.71	46.7
GSMUA_Achr9P06650_001	Banana	nucleus	35.29	45.78
GSMUA_Achr3P13990_001	Banana	nucleus	39.08	43.66
GSMUA_Achr6P27030_001	Banana	nucleus	32.35	43.5
GSMUA_Achr10P...	Banana	nucleus	34.45	43.5
GSMUA_Achr7P22720_001	Banana	mitochondrion	24.16	40.93
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	33.82	40.45
GSMUA_Achr8P10040_001	Banana	nucleus	37.6	40.04
GSMUA_Achr1P17940_001	Banana	nucleus	39.29	40.04
GSMUA_Achr11P...	Banana	nucleus	33.4	38.41
GSMUA_Achr1P07110_001	Banana	nucleus	39.08	38.27
GSMUA_Achr10P...	Banana	nucleus	38.03	37.79
GSMUA_Achr9P23870_001	Banana	nucleus	34.03	37.33
GSMUA_Achr7P24170_001	Banana	nucleus	39.08	37.05
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	37.82	36.73
GSMUA_Achr4P04310_001	Banana	nucleus	35.92	36.15
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	36.55	35.58
GSMUA_Achr4P14030_001	Banana	nucleus	40.55	35.54
GSMUA_Achr11P...	Banana	nucleus	38.45	34.33
GSMUA_Achr11P...	Banana	nucleus	36.34	33.86
GSMUA_Achr3P29940_001	Banana	nucleus	41.18	33.73
GSMUA_Achr4P05240_001	Banana	nucleus	34.87	33.2
GSMUA_Achr4P07200_001	Banana	nucleus	37.6	33.15
GSMUA_Achr7P25960_001	Banana	nucleus	40.97	32.94
GSMUA_Achr1P02080_001	Banana	nucleus	37.6	32.72
GSMUA_Achr11P...	Banana	nucleus	37.18	31.27
GSMUA_Achr7P18610_001	Banana	nucleus	24.79	31.22
GSMUA_Achr5P23130_001	Banana	nucleus	24.58	30.79
GSMUA_Achr6P02490_001	Banana	nucleus	23.11	29.73
GSMUA_Achr10P...	Banana	nucleus	23.74	29.5
GSMUA_Achr3P20220_001	Banana	nucleus	24.79	27.83
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	21.85	27.15
GSMUA_Achr10P...	Banana	nucleus	22.27	26.57
GSMUA_AchrUn_...	Banana	nucleus	43.28	23.17

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
EnsemblPlantsGene:GSMUA_Achr5G06450_001	EnsemblPlants:GSMUA_Achr5P06450_001	EnsemblPlants:GSMUA_Achr5T06450_001	InterPro:IPR013087	UniProt:M0SW74	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF49	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000295AD93
InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:	:

Description

ZOS1-04 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G06450_001]

Coordinates

chr5:-:4718602..4724368

Molecular Weight (calculated)

52255.8 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.588

Length

476 amino acids

Sequence
(BLAST)

001: MIQQHQLVDE TMSNLTSASG EASVSSNQQS SFASPNPNPT KKKRNLPGNP DPDAEVIALS PKTLMATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RSSKEVRKKV YICPEVTCVH HDPSRALGDL TGIKKHFSRK HGEKKWKCDK CSKKYAVQSD WKAHSKICGT REYRCDCGTL FSRRDSFITH RAFCDALAEE
201: SARAIAANPL ANHHTILFPQ PAASHEPSLL QQTILQRQEH QHQHLNLRSD MPPWLACQAP ISLAHLDLPS SVCSTRLDRE CSRENPAPHP PLPQAFQAPA
301: SSPHMSATAL LQKAAEMGAT MSRPPHLGQM ATHTANAVAV PNSASGFDMV MNSLTSTPGF DGSFDDAFGG MLGSEREPGN SNMQSSTRRH GMAEEAGGVG
401: GGNDGKTRDF LGLKAFPHRN ILNLTALDPC MSSTPFEHHQ QSIATINTPV IYEKSTDCSH SPPLTFSFSA TFCGIN

Best Arabidopsis Sequence Match ( AT1G55110.2 )
(BLAST)

001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD

Arabidopsis Description

IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.