Factsheet for GSMUA_Achr9P23870_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09390	Canola	nucleus	23.73	86.55
CDY04118	Canola	nucleus	23.73	86.55
CDY53540	Canola	nucleus	26.96	60.31
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	67.97	60.2
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	48.62	57.97
CDY04117	Canola	nucleus	27.65	56.07
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	49.08	53.52
GSMUA_Achr4P04310_001	Banana	nucleus	58.06	53.28
KRG89168	Soybean	nucleus, plastid	41.01	51.15
GSMUA_Achr1P07110_001	Banana	nucleus	57.14	51.03
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	57.37	50.92
GSMUA_Achr10P...	Banana	nucleus	53.92	48.85
GSMUA_Achr3P13990_001	Banana	nucleus	45.85	46.71
GSMUA_Achr7P14780_001	Banana	nucleus	36.87	44.82
GSMUA_Achr1P17940_001	Banana	nucleus	47.93	44.54
GSMUA_Achr3P25410_001	Banana	nucleus	33.41	44.48
KRH34792	Soybean	nucleus	56.22	43.96
KRG91985	Soybean	nucleus	56.22	43.57
GSMUA_Achr2P08460_001	Banana	nucleus	31.34	43.17
GSMUA_Achr1P02080_001	Banana	nucleus	54.38	43.14
GSMUA_Achr2P16690_001	Banana	nucleus	36.41	42.93
VIT_01s0010g02100.t01	Wine grape	nucleus	56.45	42.83
KRG90705	Soybean	nucleus	55.3	42.33
GSMUA_Achr9P06650_001	Banana	nucleus	35.71	42.23
KRH49489	Soybean	nucleus, plastid	51.38	41.84
KRH36039	Soybean	nucleus	54.84	41.68
GSMUA_Achr10P...	Banana	nucleus	36.18	41.64
KRH49485	Soybean	nucleus	51.84	41.44
GSMUA_Achr6P27030_001	Banana	nucleus	33.64	41.24
GSMUA_Achr7P09150_001	Banana	nucleus	38.94	41.22
KRG89167	Soybean	nucleus, plastid	52.07	41.17
GSMUA_Achr7P13540_001	Banana	nucleus	34.33	40.82
GSMUA_Achr5P22140_001	Banana	nucleus	35.71	40.68
GSMUA_Achr2P08910_001	Banana	nucleus	35.94	40.52
Os09t0555700-02	Rice	nucleus	49.77	40.37
GSMUA_Achr4P05240_001	Banana	nucleus	46.08	40.0
GSMUA_Achr10P...	Banana	nucleus	40.32	38.98
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	58.99	38.73
TraesCS5A01G356100.1	Wheat	nucleus, plastid	48.16	38.35
TraesCS5B01G358600.1	Wheat	nucleus, plastid	48.16	38.28
TraesCS5D01G364900.1	Wheat	nucleus, plastid	48.16	38.21
CDY45271	Canola	nucleus	36.18	37.74
GSMUA_Achr11P...	Banana	nucleus	46.08	37.52
PGSC0003DMT400075837	Potato	nucleus	44.01	36.87
GSMUA_Achr8P10040_001	Banana	nucleus	37.79	36.69
Solyc04g008500.2.1	Tomato	nucleus	43.55	36.56
GSMUA_Achr11P...	Banana	nucleus	42.4	36.01
Bra026204.1-P	Field mustard	nucleus, plastid	37.1	35.78
GSMUA_Achr7P22720_001	Banana	mitochondrion	23.04	35.59
CDY45270	Canola	nucleus	36.64	35.33
GSMUA_Achr11P...	Banana	nucleus	45.16	34.63
CDY59418	Canola	nucleus	32.95	34.62
CDY17440	Canola	nucleus	37.56	34.1
Bra026203.1-P	Field mustard	nucleus, plastid	36.41	34.05
GSMUA_Achr5P06450_001	Banana	nucleus	37.33	34.03
CDY03081	Canola	nucleus	40.55	33.59
CDY17615	Canola	nucleus	40.78	33.59
Bra026819.1-P	Field mustard	nucleus	35.02	32.55
CDX81653	Canola	nucleus	35.02	32.55
GSMUA_Achr11P...	Banana	nucleus	30.88	32.37
CDY09391	Canola	nucleus	42.17	32.28
CDY15814	Canola	nucleus	35.02	32.14
GSMUA_Achr7P24170_001	Banana	nucleus	37.1	32.07
Bra024834.1-P	Field mustard	nucleus, plastid	40.78	32.07
CDY15811	Canola	nucleus	41.94	32.04
AT1G14580.3	Thale cress	nucleus	35.48	32.02
Bra026616.1-P	Field mustard	nucleus	37.56	31.9
AT2G02080.3	Thale cress	nucleus, plastid	37.79	31.78
Bra023223.1-P	Field mustard	plastid	35.02	31.67
CDY68983	Canola	nucleus	28.34	31.46
CDY17614	Canola	nucleus, plastid	37.1	31.38
Bra024833.1-P	Field mustard	plastid	37.1	31.38
Bra026617.1-P	Field mustard	nucleus	42.17	31.02
CDY03080	Canola	nucleus, plastid	36.64	30.81
CDY12268	Canola	nucleus	30.88	30.04
GSMUA_Achr4P14030_001	Banana	nucleus	37.56	30.02
AT2G02070.2	Thale cress	nucleus	41.47	29.9
Bra040974.1-P	Field mustard	nucleus, plastid	40.09	29.74
GSMUA_Achr3P29940_001	Banana	nucleus	38.71	28.92
GSMUA_Achr4P07200_001	Banana	nucleus	35.94	28.89
GSMUA_Achr7P25960_001	Banana	nucleus	38.71	28.38
GSMUA_Achr10P...	Banana	nucleus	23.5	26.63
GSMUA_Achr7P18610_001	Banana	nucleus	23.04	26.45
GSMUA_Achr6P02490_001	Banana	nucleus	22.12	25.95
GSMUA_Achr5P23130_001	Banana	nucleus	22.58	25.79
GSMUA_Achr3P20220_001	Banana	nucleus	23.5	24.06
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	21.2	24.02
GSMUA_Achr10P...	Banana	nucleus	21.66	23.56
GSMUA_AchrUn_...	Banana	nucleus	38.25	18.67

Protein Annotations

EnsemblPlants:GSMUA_Achr9P23870_001	EnsemblPlants:GSMUA_Achr9T23870_001	EnsemblPlantsGene:GSMUA_Achr9G23870_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0046872	InterPro:IPR013087	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
PANTHER:PTHR10593	PANTHER:PTHR10593:SF50	PFAM:PF12171	PFscan:PS50157	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00029575AA	UniProt:M0U2Z4	MapMan:15.5.15	:

Description

ZOS9-17 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G23870_001]

Coordinates

chr9:+:28707441..28709963

Molecular Weight (calculated)

47348.8 Da

IEP (calculated)

9.982

GRAVY (calculated)

-0.740

Length

434 amino acids

Sequence
(BLAST)

001: MAAASSSVPF LGFREEDQSN TQHPQQKQQS SSSSAAAARP ASPQKKKRTL PGNPSKFICE VCNKGFQREQ NLQLHRRGHN LPWKLKQKNP KDVVRRRVYT
101: CPEPSCVHHD PSRALGDLTG IKKHYCRKHG EKKWKCDKCS KRYAVQSDWK AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAQESA RIPAAMSIGS
201: HLYGDNGINL DLPQVNSQLS SLQDQIRLGG GATQFDHLTM PSFRPPPSAS SFYLGGGSGH QDFNESTHGL LQLKICRFMP APHLPPKESI PPHMSATALL
301: QKAAQMGATS SRGTASSLLR GLGRSFDGVR ESSASQQEDE TQFQGLMSSL ATGNSTGSFG GGGNESKLQG YPSATGRGAS DRLTRDFLGV GSMMRNMGRG
401: IARREQHSGM DIDELDSEMK SGSSTPSFVG GNLQ

Best Arabidopsis Sequence Match ( AT2G02080.2 )
(BLAST)

001: MATNRFICDV CNKGFQREQN LQLHRRGHNL PWKLKQKSTK EVKRKVYLCP EPTCVHHDPS RALGDLTGIK KHYYRKHGEK KWKCEKCSKR YAVQSDWKAH
101: SKTCGTKEYR CDCGTIFSRR DSYITHRAFC DALIQETARN PTVSFTSMTA ASSGVGSGGI YGRLGGGSAL SHHHLSDHPN FGFNPLVGYN LNIASSDNRR
201: DFIPQSSNPN FLIQSASSQG MLNTTPNNNN QSFMNQHGLI QFDPVDNINL KSSGTNNSFF NLGFFQENTK NSETSLPSLY STDVLVHHRE ENLNAGSNVS
301: ATALLQKATQ MGSVTSNDPS ALFRGLASSS NSSSVIANHF GGGRIMENDN NGNLQGLMNS LAAVNGGGGS GGSIFDVQFG DNGNMSGSDK LTLDFLGVGG
401: MVRNVNRGGG GGGRGSARGG VSLDGEAKFP EQNYPFGRG

Arabidopsis Description

IDD4Protein indeterminate-domain 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GYC1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.