Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53540 | Canola | nucleus | 41.33 | 99.48 |
| CDY59418 | Canola | nucleus | 86.51 | 97.82 |
| Bra026819.1-P | Field mustard | nucleus | 97.64 | 97.64 |
| CDY04118 | Canola | nucleus | 23.55 | 92.44 |
| CDY09390 | Canola | nucleus | 23.55 | 92.44 |
| AT1G14580.3 | Thale cress | nucleus | 82.01 | 79.63 |
| CDY14910 | Canola | nucleus | 20.56 | 72.18 |
| CDY04117 | Canola | nucleus | 31.05 | 67.76 |
| CDY37489 | Canola | nucleus | 26.34 | 66.85 |
| CDY72283 | Canola | nucleus | 26.55 | 65.61 |
| CDY15814 | Canola | nucleus | 63.6 | 62.79 |
| CDY17440 | Canola | nucleus | 63.81 | 62.34 |
| CDY17614 | Canola | nucleus, plastid | 65.52 | 59.65 |
| CDY03080 | Canola | nucleus, plastid | 65.74 | 59.5 |
| CDY70142 | Canola | nucleus | 20.34 | 52.2 |
| KRG89168 | Soybean | nucleus, plastid | 35.12 | 47.13 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 34.26 | 43.96 |
| CDY45271 | Canola | nucleus | 36.62 | 41.11 |
| CDY17615 | Canola | nucleus | 45.82 | 40.61 |
| CDY03081 | Canola | nucleus | 45.4 | 40.46 |
| CDY09391 | Canola | nucleus | 48.82 | 40.21 |
| CDY15811 | Canola | nucleus | 48.82 | 40.14 |
| CDX96046 | Canola | nucleus | 19.91 | 39.91 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 35.76 | 39.2 |
| CDY45270 | Canola | nucleus | 37.69 | 39.11 |
| CDX97281 | Canola | nucleus, plastid | 31.91 | 38.7 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 32.76 | 38.44 |
| CDX94759 | Canola | nucleus | 37.9 | 38.15 |
| CDY22307 | Canola | nucleus | 37.9 | 38.15 |
| CDY24490 | Canola | nucleus | 34.9 | 37.47 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 37.26 | 37.26 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 38.54 | 37.04 |
| CDX77936 | Canola | nucleus | 34.48 | 36.93 |
| CDX91304 | Canola | nucleus, plastid | 31.69 | 36.63 |
| CDY32514 | Canola | nucleus | 37.69 | 35.92 |
| CDY18188 | Canola | nucleus | 36.62 | 35.7 |
| CDX75732 | Canola | nucleus | 33.83 | 35.67 |
| GSMUA_Achr10P... | Banana | nucleus | 36.19 | 35.28 |
| CDX89862 | Canola | nucleus | 36.19 | 35.21 |
| CDX86010 | Canola | nucleus | 33.62 | 35.04 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 32.55 | 35.02 |
| KRH49489 | Soybean | nucleus, plastid | 39.83 | 34.9 |
| CDY11241 | Canola | nucleus | 37.47 | 34.79 |
| CDY53836 | Canola | nucleus | 33.4 | 34.44 |
| CDX80854 | Canola | nucleus | 37.05 | 34.26 |
| CDX82515 | Canola | nucleus | 32.33 | 34.24 |
| CDY44344 | Canola | nucleus | 36.62 | 34.2 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 35.76 | 34.08 |
| KRH49485 | Soybean | nucleus | 39.61 | 34.07 |
| CDY10404 | Canola | nucleus | 36.83 | 33.92 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 34.26 | 33.83 |
| Os09t0555700-02 | Rice | nucleus | 38.54 | 33.64 |
| PGSC0003DMT400075837 | Potato | nucleus | 37.26 | 33.59 |
| CDY57128 | Canola | nucleus | 35.12 | 33.33 |
| KRG90705 | Soybean | nucleus | 40.47 | 33.33 |
| CDY51742 | Canola | nucleus | 34.48 | 33.26 |
| CDY67009 | Canola | nucleus | 33.83 | 33.19 |
| CDX81372 | Canola | nucleus | 34.69 | 33.13 |
| CDY55238 | Canola | nucleus | 34.48 | 33.13 |
| Solyc04g008500.2.1 | Tomato | nucleus | 36.62 | 33.08 |
| CDX70328 | Canola | nucleus | 36.4 | 33.07 |
| KRH36039 | Soybean | nucleus | 40.26 | 32.92 |
| Os08t0554400-02 | Rice | nucleus | 38.54 | 32.85 |
| KRG89167 | Soybean | nucleus, plastid | 38.54 | 32.79 |
| CDX97521 | Canola | nucleus | 34.05 | 32.78 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 34.26 | 32.72 |
| GSMUA_Achr11P... | Banana | nucleus | 37.05 | 32.46 |
| KRH34792 | Soybean | nucleus | 38.54 | 32.43 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 34.69 | 32.4 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 39.61 | 32.34 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 37.69 | 32.23 |
| KRG91985 | Soybean | nucleus | 38.54 | 32.14 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 37.47 | 32.11 |
| Zm00001d021403_P001 | Maize | nucleus | 33.19 | 32.02 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 37.47 | 31.99 |
| KXG25416 | Sorghum | nucleus | 37.69 | 31.83 |
| OQU89911 | Sorghum | nucleus, plastid | 35.97 | 31.52 |
| GSMUA_Achr11P... | Banana | nucleus | 34.05 | 31.12 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 36.4 | 31.08 |
| CDY12268 | Canola | nucleus | 29.55 | 30.94 |
| EES11271 | Sorghum | nucleus | 39.19 | 30.55 |
| KXG31026 | Sorghum | nucleus | 38.54 | 30.25 |
| Zm00001d026113_P006 | Maize | nucleus | 38.76 | 30.22 |
| Os02t0672100-01 | Rice | nucleus | 39.61 | 30.08 |
| Zm00001d017560_P001 | Maize | nucleus | 37.47 | 30.07 |
| Os04t0566400-02 | Rice | nucleus | 39.4 | 30.02 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 37.05 | 29.93 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 37.05 | 29.93 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 39.19 | 29.9 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 36.83 | 29.86 |
| GSMUA_Achr11P... | Banana | nucleus | 35.76 | 29.51 |
| Zm00001d031992_P001 | Maize | nucleus | 37.47 | 28.93 |
| Zm00001d002654_P003 | Maize | nucleus | 39.19 | 28.91 |
| CDY68983 | Canola | nucleus | 23.34 | 27.88 |
| CDY36123 | Canola | nucleus | 22.48 | 27.78 |
| CDY51986 | Canola | nucleus | 22.48 | 27.78 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 39.4 | 27.75 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 39.19 | 27.64 |
| CDY04204 | Canola | nucleus | 20.77 | 27.02 |
| CDY04203 | Canola | plastid | 21.63 | 26.23 |
| CDX84974 | Canola | nucleus | 21.41 | 26.11 |
| CDY60366 | Canola | nucleus | 21.41 | 26.11 |
| KXG36163 | Sorghum | nucleus | 31.91 | 25.6 |
| Zm00001d006319_P001 | Maize | nucleus | 30.19 | 25.22 |
| CDY07400 | Canola | nucleus | 21.84 | 24.7 |
| CDY09400 | Canola | nucleus | 23.13 | 24.66 |
| CDY17620 | Canola | nucleus | 23.13 | 24.32 |
| CDY60095 | Canola | nucleus | 22.91 | 24.21 |
| CDY15800 | Canola | nucleus | 22.7 | 23.98 |
| CDY63960 | Canola | nucleus | 22.91 | 23.73 |
| CDY04102 | Canola | nucleus | 22.7 | 23.61 |
| CDY70938 | Canola | cytosol, nucleus | 12.63 | 21.61 |
| CDY67587 | Canola | cytosol, nucleus | 9.64 | 20.0 |
Protein Annotations
| EnsemblPlants:CDX81653 | EnsemblPlantsGene:GSBRNA2T00136567001 | Gene3D:3.30.160.60 | GO:A0A078D2X3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF66 | PFAM:PF00096 | PFscan:PS50157 | ProteinID:CDX81653 | ProteinID:CDX81653.1 | ScanProsite:PS00028 |
| SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EEB7FC | MapMan:15.5.15 | : |
Description
BnaC08g39480D
Coordinates
chrLK031826:+:183855..187245
Molecular Weight (calculated)
51306.7 Da
IEP (calculated)
9.237
GRAVY (calculated)
-0.734
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSYNNTIS SSSTQSFLLS SAATGSNNFN REETAMTMIQ QPNSVAPPPP PKKRRNQPGN SYPDAEVIAL SPKTIMATNR FLCEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSNKEVRRK VYICPEPTCV HHDPSRALGD LTGIKKHYYR KHGEKKWNCE KCSKRYAVQS DWKAHSKICG TKEYRCDCGT IFSRRDSYIT
201: HRAFCDALIQ ESARNPTVSF TAMAAASGGG GRHGSYGGAS SALSHNHFGN NSNTGFTPLA AGYNLNRSSS EKFEDFIPQP TNPYHGPNNF LMQCSSNQGL
301: LAHNDQSLLN QHGMISLGDT INNNNNNLFN LGNFQHNIKN SDQISVPSLF ADGAENNHPS ALLRGLTSSS SSSAVVNEFG DNENGNLHGL MNSLAATTDQ
401: QGRSGSSIFD LHFGNNLSMG GSDRLTLDFL GVNGRVMSNV NGRGGRNPVP LDTEMKFSQP NHPFERA
101: RGHNLPWKLK QKSNKEVRRK VYICPEPTCV HHDPSRALGD LTGIKKHYYR KHGEKKWNCE KCSKRYAVQS DWKAHSKICG TKEYRCDCGT IFSRRDSYIT
201: HRAFCDALIQ ESARNPTVSF TAMAAASGGG GRHGSYGGAS SALSHNHFGN NSNTGFTPLA AGYNLNRSSS EKFEDFIPQP TNPYHGPNNF LMQCSSNQGL
301: LAHNDQSLLN QHGMISLGDT INNNNNNLFN LGNFQHNIKN SDQISVPSLF ADGAENNHPS ALLRGLTSSS SSSAVVNEFG DNENGNLHGL MNSLAATTDQ
401: QGRSGSSIFD LHFGNNLSMG GSDRLTLDFL GVNGRVMSNV NGRGGRNPVP LDTEMKFSQP NHPFERA
001: MDLCSFSKNR PAEKMSSSYN TIALSSTPTF LLSSAAAGPG PNNFNRQEAA MTMVQQQPTS SVAPPPKKRR NQPGNPNPDA EVIALSPKTI MATNRFLCEV
101: CNKGFQREQN LQLHRRGHNL PWKLKQKSNK EVRRKVYLCP EPSCVHHDPA RALGDLTGIK KHYYRKHGEK KWKCDKCSKR YAVQSDWKAH SKTCGTKEYR
201: CDCGTIFSRR DSYITHRAFC DALIQESARN PTVSFTAMAA GGGGGARHGF YGGASSALSH NHFGNNPNSG FTPLAAAGYN LNRSSSDKFE DFVPQATNPN
301: PGPTNFLMQC SPNQGLLAQN NQSLMNHHGL ISLGDNNNNN HNFFNLAYFQ DTKNSDQTGV PSLFTNGADN NGPSALLRGL TSSSSSSVVV NDFGDCDHGN
401: LQGLMNSLAA TTDQQGRSPS LFDLHFANNL SMGGSDRLTL DFLGVNGGIV STVNGRGGRS GGPPLDAEMK FSHPNHPYGK A
101: CNKGFQREQN LQLHRRGHNL PWKLKQKSNK EVRRKVYLCP EPSCVHHDPA RALGDLTGIK KHYYRKHGEK KWKCDKCSKR YAVQSDWKAH SKTCGTKEYR
201: CDCGTIFSRR DSYITHRAFC DALIQESARN PTVSFTAMAA GGGGGARHGF YGGASSALSH NHFGNNPNSG FTPLAAAGYN LNRSSSDKFE DFVPQATNPN
301: PGPTNFLMQC SPNQGLLAQN NQSLMNHHGL ISLGDNNNNN HNFFNLAYFQ DTKNSDQTGV PSLFTNGADN NGPSALLRGL TSSSSSSVVV NDFGDCDHGN
401: LQGLMNSLAA TTDQQGRSPS LFDLHFANNL SMGGSDRLTL DFLGVNGGIV STVNGRGGRS GGPPLDAEMK FSHPNHPYGK A
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.