Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026203.1-P | Field mustard | nucleus, plastid | 97.84 | 87.72 |
| CDY45270 | Canola | nucleus | 94.71 | 87.56 |
| CDY04118 | Canola | nucleus | 23.08 | 80.67 |
| CDY09390 | Canola | nucleus | 23.08 | 80.67 |
| CDY53540 | Canola | nucleus | 32.21 | 69.07 |
| CDY14910 | Canola | nucleus | 21.39 | 66.92 |
| CDY37489 | Canola | nucleus | 26.92 | 60.87 |
| CDY72283 | Canola | nucleus | 26.68 | 58.73 |
| CDY04117 | Canola | nucleus | 29.33 | 57.01 |
| CDY70142 | Canola | nucleus | 20.67 | 47.25 |
| KRG89168 | Soybean | nucleus, plastid | 37.74 | 45.11 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 37.02 | 42.31 |
| CDX96046 | Canola | nucleus | 20.91 | 37.34 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 35.34 | 36.93 |
| CDX81653 | Canola | nucleus | 41.11 | 36.62 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 37.26 | 36.38 |
| CDY59418 | Canola | nucleus | 36.06 | 36.32 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 37.74 | 36.18 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 41.83 | 35.8 |
| CDY24490 | Canola | nucleus | 37.26 | 35.63 |
| CDX97281 | Canola | nucleus, plastid | 32.93 | 35.58 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 39.9 | 35.55 |
| CDX77936 | Canola | nucleus | 37.02 | 35.32 |
| GSMUA_Achr10P... | Banana | nucleus | 39.9 | 34.66 |
| AT1G14580.3 | Thale cress | nucleus | 39.66 | 34.3 |
| PGSC0003DMT400075837 | Potato | nucleus | 42.55 | 34.17 |
| CDX91304 | Canola | nucleus, plastid | 33.17 | 34.16 |
| CDX86010 | Canola | nucleus | 36.78 | 34.15 |
| CDY12268 | Canola | nucleus | 36.54 | 34.08 |
| CDY15814 | Canola | nucleus | 38.7 | 34.04 |
| CDY17440 | Canola | nucleus | 38.7 | 33.68 |
| CDY53836 | Canola | nucleus | 36.54 | 33.55 |
| Solyc04g008500.2.1 | Tomato | nucleus | 41.35 | 33.27 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 37.74 | 33.19 |
| KRH49485 | Soybean | nucleus | 43.27 | 33.15 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 38.94 | 33.06 |
| KRG89167 | Soybean | nucleus, plastid | 43.27 | 32.79 |
| CDX75732 | Canola | nucleus | 34.86 | 32.73 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 38.22 | 32.52 |
| KRH49489 | Soybean | nucleus, plastid | 41.59 | 32.46 |
| KRG91985 | Soybean | nucleus | 43.51 | 32.32 |
| KRG90705 | Soybean | nucleus | 43.99 | 32.28 |
| KRH36039 | Soybean | nucleus | 44.23 | 32.22 |
| CDY67009 | Canola | nucleus | 36.78 | 32.14 |
| KRH34792 | Soybean | nucleus | 42.79 | 32.07 |
| CDY68983 | Canola | nucleus | 30.05 | 31.97 |
| CDY17614 | Canola | nucleus, plastid | 39.42 | 31.97 |
| CDX82515 | Canola | nucleus | 33.65 | 31.75 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 43.27 | 31.47 |
| Zm00001d021403_P001 | Maize | nucleus | 36.54 | 31.41 |
| CDY22307 | Canola | nucleus | 34.86 | 31.25 |
| Os09t0555700-02 | Rice | nucleus | 40.14 | 31.21 |
| CDY03080 | Canola | nucleus, plastid | 38.7 | 31.2 |
| GSMUA_Achr11P... | Banana | nucleus | 39.9 | 31.14 |
| CDX94759 | Canola | nucleus | 34.62 | 31.03 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 37.26 | 31.0 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 40.62 | 30.95 |
| CDX81372 | Canola | nucleus | 36.3 | 30.88 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 40.38 | 30.83 |
| GSMUA_Achr11P... | Banana | nucleus | 37.74 | 30.72 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 40.38 | 30.71 |
| CDY55238 | Canola | nucleus | 35.82 | 30.66 |
| OQU89911 | Sorghum | nucleus, plastid | 39.18 | 30.58 |
| CDY51742 | Canola | nucleus | 35.58 | 30.58 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 40.14 | 30.53 |
| CDY57128 | Canola | nucleus | 36.06 | 30.49 |
| CDY18188 | Canola | nucleus | 34.86 | 30.27 |
| CDX89862 | Canola | nucleus | 34.86 | 30.21 |
| CDY17615 | Canola | nucleus | 38.22 | 30.17 |
| CDY03081 | Canola | nucleus | 37.98 | 30.15 |
| CDX97521 | Canola | nucleus | 35.1 | 30.1 |
| KXG25416 | Sorghum | nucleus | 39.66 | 29.84 |
| CDY11241 | Canola | nucleus | 36.06 | 29.82 |
| Os08t0554400-02 | Rice | nucleus | 39.18 | 29.74 |
| CDY44344 | Canola | nucleus | 35.34 | 29.4 |
| CDY32514 | Canola | nucleus | 34.62 | 29.39 |
| CDY10404 | Canola | nucleus | 35.58 | 29.19 |
| CDX80854 | Canola | nucleus | 35.34 | 29.11 |
| EES11271 | Sorghum | nucleus | 41.59 | 28.88 |
| CDX70328 | Canola | nucleus | 35.58 | 28.79 |
| CDY09391 | Canola | nucleus | 38.94 | 28.57 |
| CDY15811 | Canola | nucleus | 38.94 | 28.52 |
| GSMUA_Achr11P... | Banana | nucleus | 38.7 | 28.45 |
| Zm00001d026113_P006 | Maize | nucleus | 40.87 | 28.38 |
| Zm00001d017560_P001 | Maize | nucleus | 39.42 | 28.18 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 38.94 | 28.12 |
| KXG31026 | Sorghum | nucleus | 40.14 | 28.07 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 38.94 | 28.03 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 38.94 | 28.03 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 40.87 | 27.78 |
| Os04t0566400-02 | Rice | nucleus | 40.38 | 27.41 |
| Zm00001d002654_P003 | Maize | nucleus | 41.35 | 27.17 |
| Os02t0672100-01 | Rice | nucleus | 40.14 | 27.15 |
| KXG36163 | Sorghum | nucleus | 37.74 | 26.98 |
| Zm00001d031992_P001 | Maize | nucleus | 39.18 | 26.94 |
| Zm00001d006319_P001 | Maize | nucleus | 35.1 | 26.12 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 40.87 | 25.68 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 40.62 | 25.49 |
| CDY36123 | Canola | nucleus | 22.6 | 24.87 |
| CDY51986 | Canola | nucleus | 22.6 | 24.87 |
| CDX84974 | Canola | nucleus | 22.12 | 24.02 |
| CDY60366 | Canola | nucleus | 22.12 | 24.02 |
| CDY04204 | Canola | nucleus | 20.67 | 23.96 |
| CDY04203 | Canola | plastid | 22.12 | 23.9 |
| CDY09400 | Canola | nucleus | 24.04 | 22.83 |
| CDY07400 | Canola | nucleus | 22.6 | 22.76 |
| CDY17620 | Canola | nucleus | 24.28 | 22.75 |
| CDY60095 | Canola | nucleus | 24.04 | 22.62 |
| CDY15800 | Canola | nucleus | 23.8 | 22.4 |
| CDY63960 | Canola | nucleus | 24.28 | 22.39 |
| CDY04102 | Canola | nucleus | 24.04 | 22.27 |
| CDY70938 | Canola | cytosol, nucleus | 12.98 | 19.78 |
| CDY67587 | Canola | cytosol, nucleus | 10.1 | 18.67 |
Protein Annotations
| EnsemblPlants:CDY45271 | EnsemblPlantsGene:GSBRNA2T00081713001 | Gene3D:3.30.160.60 | GO:A0A078I5T2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 |
| PFscan:PS50157 | ProteinID:CDY45271 | ProteinID:CDY45271.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EF19A1 | UniProt:A0A078I5T2 | MapMan:15.5.15 | : | : |
Description
BnaA06g09410DBnaA06g09410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5T2]
Coordinates
chrLK032619:+:63303..65729
Molecular Weight (calculated)
45573.9 Da
IEP (calculated)
8.302
GRAVY (calculated)
-0.808
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSYNNTIS SSSTQSFPLL AIGANNFNRE ETAMTMNQQR PNSVSPPPRR LRNKPGNPSP DAEVIALTPE EIMATNRFQC EVCEKGFQRQ QNLQLHRRGH
101: NLPFNLKQKS DEEIRRKVYV CPEPTCVYHD PSRALGDLTG IKKHYCRKHG EKKFKCEKCD KFYAVESDCK AHSMICGTKE YRCVCGTKFS RSDSYETHRA
201: FCEALAQESA GNPNLSFTEM LAAAGGSDGS SRDGLYGGAS SALSHNHFGD NSNSGFAPPG AGFNLNRSSS PKFEDFFPQS TNPNHGPTTN FPMQYPSNQG
301: LLARNDQNLM NQHGLINNNN VPSAQLRGSS VAANNFGGSG NVNFQGQMNS LAATSGQQGR PGSSIFDHRL GNNLSIEGPD RRTLDFLGVN GRGGRNEPPL
401: DLDMKFSDPN NPFGNV
101: NLPFNLKQKS DEEIRRKVYV CPEPTCVYHD PSRALGDLTG IKKHYCRKHG EKKFKCEKCD KFYAVESDCK AHSMICGTKE YRCVCGTKFS RSDSYETHRA
201: FCEALAQESA GNPNLSFTEM LAAAGGSDGS SRDGLYGGAS SALSHNHFGD NSNSGFAPPG AGFNLNRSSS PKFEDFFPQS TNPNHGPTTN FPMQYPSNQG
301: LLARNDQNLM NQHGLINNNN VPSAQLRGSS VAANNFGGSG NVNFQGQMNS LAATSGQQGR PGSSIFDHRL GNNLSIEGPD RRTLDFLGVN GRGGRNEPPL
401: DLDMKFSDPN NPFGNV
001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.