Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 18.2 | 86.55 |
| CDY09390 | Canola | nucleus | 17.84 | 84.87 |
| CDY53540 | Canola | nucleus | 22.08 | 64.43 |
| CDY04117 | Canola | nucleus | 23.14 | 61.22 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 34.28 | 53.3 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 46.29 | 52.4 |
| KRG89168 | Soybean | nucleus, plastid | 31.45 | 51.15 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 34.81 | 49.5 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 42.05 | 48.97 |
| GSMUA_Achr10P... | Banana | nucleus | 40.81 | 48.23 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 35.87 | 47.65 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 40.46 | 46.83 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 25.97 | 46.67 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 26.86 | 46.63 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 29.15 | 46.22 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 29.68 | 45.65 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 39.4 | 45.51 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 34.63 | 45.16 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 37.1 | 44.4 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 29.86 | 44.36 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 28.45 | 43.87 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 35.87 | 43.47 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 27.56 | 42.74 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 30.57 | 42.2 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 26.33 | 42.09 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 28.62 | 42.08 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 40.28 | 41.68 |
| GSMUA_Achr10P... | Banana | nucleus | 27.39 | 41.11 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 32.33 | 40.94 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 40.99 | 40.56 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 19.96 | 40.21 |
| KRH49489 | Soybean | nucleus, plastid | 37.63 | 39.96 |
| KRG91985 | Soybean | nucleus | 39.22 | 39.64 |
| KRG90705 | Soybean | nucleus | 39.58 | 39.51 |
| GSMUA_Achr11P... | Banana | nucleus | 35.51 | 39.33 |
| KRH36039 | Soybean | nucleus | 39.58 | 39.23 |
| GSMUA_Achr10P... | Banana | nucleus | 31.1 | 39.2 |
| PGSC0003DMT400075837 | Potato | nucleus | 35.87 | 39.19 |
| KRH49485 | Soybean | nucleus | 37.46 | 39.04 |
| CDY59418 | Canola | nucleus | 28.45 | 38.98 |
| KRH34792 | Soybean | nucleus | 38.16 | 38.92 |
| CDY45271 | Canola | nucleus | 28.45 | 38.7 |
| KRG89167 | Soybean | nucleus, plastid | 37.28 | 38.43 |
| GSMUA_Achr11P... | Banana | nucleus | 36.04 | 38.27 |
| Solyc04g008500.2.1 | Tomato | nucleus | 34.81 | 38.1 |
| CDY45270 | Canola | nucleus | 29.68 | 37.33 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 31.27 | 37.18 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 29.33 | 36.89 |
| GSMUA_Achr11P... | Banana | nucleus | 26.68 | 36.47 |
| Bra026819.1-P | Field mustard | nucleus | 29.68 | 35.97 |
| Zm00001d017560_P001 | Maize | nucleus | 36.93 | 35.91 |
| EES11271 | Sorghum | nucleus | 37.99 | 35.89 |
| CDX81653 | Canola | nucleus | 29.51 | 35.76 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 38.52 | 35.62 |
| AT1G14580.3 | Thale cress | nucleus | 30.21 | 35.55 |
| KXG31026 | Sorghum | nucleus | 37.28 | 35.46 |
| Zm00001d026113_P006 | Maize | nucleus | 37.46 | 35.39 |
| Os04t0566400-02 | Rice | nucleus | 38.16 | 35.24 |
| CDY17440 | Canola | nucleus | 29.68 | 35.15 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 28.8 | 35.13 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 35.69 | 35.07 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 35.69 | 34.95 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 40.81 | 34.95 |
| Os02t0672100-01 | Rice | nucleus | 37.81 | 34.8 |
| Bra023223.1-P | Field mustard | plastid | 29.51 | 34.79 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 35.51 | 34.78 |
| CDY15814 | Canola | nucleus | 28.98 | 34.67 |
| CDY03081 | Canola | nucleus | 31.63 | 34.16 |
| CDY17614 | Canola | nucleus, plastid | 30.57 | 33.72 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 30.74 | 33.72 |
| CDY17615 | Canola | nucleus | 31.27 | 33.59 |
| Bra024833.1-P | Field mustard | plastid | 30.39 | 33.53 |
| Bra026616.1-P | Field mustard | nucleus | 30.21 | 33.46 |
| CDY12268 | Canola | nucleus | 26.33 | 33.41 |
| Zm00001d002654_P003 | Maize | nucleus | 37.28 | 33.33 |
| CDY03080 | Canola | nucleus, plastid | 30.21 | 33.14 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 29.33 | 33.07 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 38.52 | 32.93 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 38.52 | 32.88 |
| CDY09391 | Canola | nucleus | 32.51 | 32.45 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 31.27 | 32.07 |
| CDY15811 | Canola | nucleus | 32.16 | 32.04 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 30.57 | 31.86 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 30.04 | 31.48 |
| CDY68983 | Canola | nucleus | 21.55 | 31.2 |
| Bra026617.1-P | Field mustard | nucleus | 32.51 | 31.19 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 31.98 | 30.94 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 31.45 | 30.64 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 19.79 | 30.27 |
| AT2G02070.2 | Thale cress | nucleus | 32.16 | 30.23 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 20.14 | 30.16 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 31.45 | 30.07 |
| GSMUA_Achr10P... | Banana | nucleus | 19.79 | 29.24 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 18.73 | 27.89 |
| GSMUA_Achr10P... | Banana | nucleus | 19.26 | 27.32 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 20.14 | 26.89 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 18.02 | 26.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.57 | 19.46 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr11G07460_001 | EnsemblPlants:GSMUA_Achr11P07460_001 | EnsemblPlants:GSMUA_Achr11T07460_001 | InterPro:IPR013087 | UniProt:M0RQ76 | PFAM:PF12171 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF50 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000296A3D8 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
Zinc finger protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr11G07460_001]
Coordinates
chr11:-:5837335..5840041
Molecular Weight (calculated)
62228.2 Da
IEP (calculated)
8.909
GRAVY (calculated)
-0.504
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLGIMEEEH CSDQKPHPPL QQRSSSATPS SSAAVPQKKK KRNLPGKPCK YLNFPSLFDP FSYSLSSNPV FREGSFVLSL SLSLSLSLIC RSYTDAEVIA
101: LSPKTLMATN RFTCEVCNKG FQREQNLQLH RRGHNLPWKL KKKNPDEVRR RVYLCPEPTC AHHDPSRALG DLTGIKKHFC RKHGEKRWKC DKCSKRYAVQ
201: SDWKAHSKIC GTREYRCDCG TLFSRRDSFV THRAFCDALA QENARIPTGA HAIGGQLYPN RGITSHFSSL AQPSNDLLLL RGNSGADHIG ATTSRQPQTY
301: HPSSFYFGGG SNQGFDEDPQ LPQSKPFRGM MQLQDLQTVA DASSSSAAAA VNAFNLGFFS GSGSTNALNS AGGGTEPMTL FAGDLTSNHI NDDANISSLY
401: NSCMQPQISA TSLLQKTTTW SGGNGSSLLR GFGTSYHSYT SGVNDGSRQS SGAHVENHFH DIMNSLASDQ VAGFSGFNPG LGNMGEDGLR SNLSAGGIGG
501: SDRSTRDFLG VDSMIRRNMV GGVQEREQHL GIGMRSMDTE MNLYRQFFFL FFYINRCFCF KFLSAS
101: LSPKTLMATN RFTCEVCNKG FQREQNLQLH RRGHNLPWKL KKKNPDEVRR RVYLCPEPTC AHHDPSRALG DLTGIKKHFC RKHGEKRWKC DKCSKRYAVQ
201: SDWKAHSKIC GTREYRCDCG TLFSRRDSFV THRAFCDALA QENARIPTGA HAIGGQLYPN RGITSHFSSL AQPSNDLLLL RGNSGADHIG ATTSRQPQTY
301: HPSSFYFGGG SNQGFDEDPQ LPQSKPFRGM MQLQDLQTVA DASSSSAAAA VNAFNLGFFS GSGSTNALNS AGGGTEPMTL FAGDLTSNHI NDDANISSLY
401: NSCMQPQISA TSLLQKTTTW SGGNGSSLLR GFGTSYHSYT SGVNDGSRQS SGAHVENHFH DIMNSLASDQ VAGFSGFNPG LGNMGEDGLR SNLSAGGIGG
501: SDRSTRDFLG VDSMIRRNMV GGVQEREQHL GIGMRSMDTE MNLYRQFFFL FFYINRCFCF KFLSAS
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.