Factsheet for AT2G02070.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04117	Canola	nucleus	31.89	89.72
Bra040974.1-P	Field mustard	nucleus, plastid	86.88	89.4
CDY17615	Canola	nucleus	77.41	88.42
CDY03081	Canola	nucleus	76.91	88.36
Bra024834.1-P	Field mustard	nucleus, plastid	80.9	88.22
CDY15811	Canola	nucleus	82.72	87.68
CDY09391	Canola	nucleus	82.23	87.3
Bra026617.1-P	Field mustard	nucleus	85.22	86.95
AT2G02080.3	Thale cress	nucleus, plastid	44.68	52.13
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	30.9	51.1
KRG89168	Soybean	nucleus, plastid	29.4	50.86
AT1G14580.3	Thale cress	nucleus	39.04	48.86
GSMUA_Achr3P13990_001	Banana	nucleus	33.22	46.95
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	29.73	44.97
AT5G44160.1	Thale cress	nucleus	34.72	44.85
GSMUA_Achr1P17940_001	Banana	nucleus	34.55	44.54
AT1G03840.1	Thale cress	nucleus	36.38	43.28
GSMUA_Achr1P07110_001	Banana	nucleus	34.72	43.0
AT3G50700.1	Thale cress	nucleus	32.23	42.92
AT4G02670.2	Thale cress	nucleus, plastid	28.57	42.57
GSMUA_Achr10P...	Banana	nucleus	33.55	42.17
GSMUA_Achr9P23870_001	Banana	nucleus	29.9	41.47
AT1G55110.2	Thale cress	nucleus	31.23	41.32
AT3G45260.1	Thale cress	nucleus	30.56	41.26
Os09t0555700-02	Rice	nucleus	36.54	41.12
KRH49489	Soybean	nucleus, plastid	36.05	40.71
KRH49485	Soybean	nucleus	36.54	40.52
KRG90705	Soybean	nucleus	37.87	40.21
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	32.56	40.08
PGSC0003DMT400075837	Potato	nucleus	34.39	39.96
GSMUA_Achr4P04310_001	Banana	nucleus	31.4	39.96
KRH36039	Soybean	nucleus	37.87	39.93
VIT_01s0010g02100.t01	Wine grape	nucleus	37.87	39.86
KRH34792	Soybean	nucleus	36.54	39.64
KRG89167	Soybean	nucleus, plastid	35.88	39.34
AT5G66730.1	Thale cress	nucleus	32.56	39.2
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	31.89	39.18
Solyc04g008500.2.1	Tomato	nucleus	33.22	38.68
KRG91985	Soybean	nucleus	35.88	38.57
TraesCS5A01G356100.1	Wheat	nucleus, plastid	34.72	38.35
TraesCS5B01G358600.1	Wheat	nucleus, plastid	34.72	38.28
TraesCS5D01G364900.1	Wheat	nucleus, plastid	34.72	38.21
AT5G03150.1	Thale cress	nucleus	31.89	38.17
EES11271	Sorghum	nucleus	37.87	38.06
Os08t0554400-02	Rice	nucleus	34.55	37.96
TraesCS2B01G421100.1	Wheat	nucleus	38.37	37.75
Zm00001d017560_P001	Maize	nucleus	36.05	37.29
GSMUA_Achr1P02080_001	Banana	nucleus	33.72	37.11
AT3G13810.2	Thale cress	nucleus	31.56	36.97
GSMUA_Achr11P...	Banana	nucleus	32.72	36.96
KXG25416	Sorghum	nucleus	33.89	36.89
KXG31026	Sorghum	nucleus	36.38	36.81
Zm00001d021403_P001	Maize	nucleus	29.57	36.78
Os04t0566400-02	Rice	nucleus	37.38	36.7
TraesCS6B01G271000.1	Wheat	nucleus	34.88	36.46
Zm00001d026113_P006	Maize	nucleus	36.21	36.39
AT5G60470.2	Thale cress	nucleus	27.74	36.38
TraesCS6D01G235800.1	Wheat	nucleus	34.88	36.33
OQU89911	Sorghum	nucleus, plastid	32.06	36.21
TraesCS6A01G254500.1	Wheat	nucleus	34.72	36.16
GSMUA_Achr4P05240_001	Banana	nucleus	29.9	36.0
Zm00001d002654_P003	Maize	nucleus	37.71	35.86
GSMUA_Achr11P...	Banana	nucleus	30.23	35.62
TraesCS2D01G400300.2	Wheat	nucleus	38.37	34.89
TraesCS2A01G403200.2	Wheat	nucleus	38.37	34.84
Os02t0672100-01	Rice	nucleus	35.55	34.8
Zm00001d031992_P001	Maize	nucleus	34.05	33.88
GSMUA_Achr11P...	Banana	nucleus	30.23	32.16
KXG36163	Sorghum	nucleus	29.24	30.24
Zm00001d006319_P001	Maize	nucleus	25.91	27.91
AT1G25250.3	Thale cress	nucleus	17.61	27.53
AT2G01940.3	Thale cress	nucleus	19.6	26.46
AT1G68130.1	Thale cress	nucleus	17.77	25.54

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:814738	ProteinID:AAC97225.1	ProteinID:AEC05542.1	EMBL:AJ621495
ProteinID:ANM62239.1	ArrayExpress:AT2G02070	EnsemblPlantsGene:AT2G02070	RefSeq:AT2G02070	TAIR:AT2G02070	RefSeq:AT2G02070-TAIR-G
EnsemblPlants:AT2G02070.2	EMBL:AY056174	EMBL:AY081314	Unigene:At.13356	Symbol:AtIDD5	EMBL:BT001215
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0046872	InterPro:IPR013087	RefSeq:NP_001324413.1	RefSeq:NP_178316.1	PFAM:PF12171	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF50	UniProt:Q9ZUL3	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI00000AC330	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]

Coordinates

chr2:+:505375..510781

Molecular Weight (calculated)

64467.3 Da

IEP (calculated)

9.329

GRAVY (calculated)

-0.798

Length

602 amino acids

Sequence
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.