Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017560_P001 | Maize | nucleus | 91.43 | 93.47 |
| CDY04118 | Canola | nucleus | 17.14 | 85.71 |
| CDY09390 | Canola | nucleus | 16.97 | 84.87 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 72.94 | 75.35 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 72.61 | 74.74 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 72.61 | 74.74 |
| EES11271 | Sorghum | nucleus | 69.08 | 68.61 |
| CDY53540 | Canola | nucleus | 21.51 | 65.98 |
| CDY04117 | Canola | nucleus | 23.03 | 64.02 |
| KRG89168 | Soybean | nucleus, plastid | 31.6 | 54.02 |
| KXG25416 | Sorghum | nucleus | 41.34 | 44.48 |
| GSMUA_Achr10P... | Banana | nucleus | 34.45 | 42.8 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 40.67 | 42.31 |
| KRH49489 | Soybean | nucleus, plastid | 37.48 | 41.84 |
| KRG90705 | Soybean | nucleus | 39.5 | 41.45 |
| EES02157 | Sorghum | nucleus | 33.45 | 41.37 |
| CDY59418 | Canola | nucleus | 28.57 | 41.16 |
| KRH36039 | Soybean | nucleus | 39.16 | 40.81 |
| CDY03081 | Canola | nucleus | 35.63 | 40.46 |
| CDY17615 | Canola | nucleus | 35.8 | 40.42 |
| OQU89911 | Sorghum | nucleus, plastid | 36.13 | 40.34 |
| CDY45271 | Canola | nucleus | 28.07 | 40.14 |
| KRG89167 | Soybean | nucleus, plastid | 36.97 | 40.07 |
| CDY17440 | Canola | nucleus | 32.1 | 39.96 |
| KRH49485 | Soybean | nucleus | 36.13 | 39.59 |
| KRH34792 | Soybean | nucleus | 36.81 | 39.46 |
| EER95332 | Sorghum | nucleus | 34.62 | 39.24 |
| CDY15814 | Canola | nucleus | 31.09 | 39.11 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 33.78 | 38.95 |
| KRG91985 | Soybean | nucleus | 36.64 | 38.93 |
| EES00944 | Sorghum | nucleus | 31.43 | 38.88 |
| PGSC0003DMT400075837 | Potato | nucleus | 33.78 | 38.8 |
| Bra026819.1-P | Field mustard | nucleus | 30.42 | 38.76 |
| EES02307 | Sorghum | nucleus | 32.44 | 38.76 |
| CDY15811 | Canola | nucleus | 36.97 | 38.73 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 35.8 | 38.59 |
| Bra026616.1-P | Field mustard | nucleus | 33.11 | 38.55 |
| CDX81653 | Canola | nucleus | 30.25 | 38.54 |
| CDY09391 | Canola | nucleus | 36.47 | 38.27 |
| CDY45270 | Canola | nucleus | 28.91 | 38.22 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 28.91 | 38.22 |
| Solyc04g008500.2.1 | Tomato | nucleus | 33.11 | 38.1 |
| CDY17614 | Canola | nucleus, plastid | 32.44 | 37.62 |
| Bra024833.1-P | Field mustard | plastid | 32.27 | 37.43 |
| GSMUA_Achr11P... | Banana | nucleus | 35.46 | 37.28 |
| AT1G14580.3 | Thale cress | nucleus | 30.08 | 37.21 |
| Bra026617.1-P | Field mustard | nucleus | 36.64 | 36.95 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 36.13 | 36.75 |
| CDY03080 | Canola | nucleus, plastid | 31.76 | 36.63 |
| KXG38489 | Sorghum | nucleus | 26.22 | 36.45 |
| AT2G02070.2 | Thale cress | nucleus | 36.81 | 36.38 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 28.24 | 36.21 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 39.33 | 35.4 |
| KXG30322 | Sorghum | nucleus | 28.24 | 35.37 |
| EES05153 | Sorghum | nucleus | 28.74 | 34.83 |
| KXG36163 | Sorghum | nucleus | 33.78 | 34.54 |
| EES04172 | Sorghum | nucleus | 29.58 | 33.85 |
| Bra023223.1-P | Field mustard | plastid | 26.05 | 32.29 |
| CDY12268 | Canola | nucleus | 22.69 | 30.27 |
| CDY68983 | Canola | nucleus | 18.82 | 28.64 |
| KXG39813 | Sorghum | nucleus, plastid | 20.34 | 26.36 |
| EER96827 | Sorghum | nucleus | 21.18 | 25.25 |
| EES13982 | Sorghum | nucleus | 22.69 | 25.19 |
| EER97442 | Sorghum | nucleus | 30.59 | 23.21 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:8073914 | UniProt:A0A194YS73 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013087 | EnsemblPlants:KXG31026 | ProteinID:KXG31026 | ProteinID:KXG31026.1 |
| ProteinID:KXG31029.1 | PFAM:PF12171 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF56 |
| SMART:SM00355 | EnsemblPlantsGene:SORBI_3004G285400 | SUPFAM:SSF57667 | unigene:Sbi.17515 | UniParc:UPI0003C71583 | InterPro:Znf_C2H2_jaz |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:62793193..62801711
Molecular Weight (calculated)
61444.4 Da
IEP (calculated)
8.752
GRAVY (calculated)
-0.410
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNSSAAAV AAMFGIRDAD HQDQMKPLLA QQHQQLLPPA PLLSAAASSS AVSGQATGAS PPPVKKKRNL PADPDAEVIA LSPKTLLATN RFVCEVCNKG
101: FQREQNLQLH RRGHNLPWKL KQKDPAQAQR RRVYLCPEPT CAHHDPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKRYAV QSDWKAHSKV CGTREYRCDC
201: GTLFSRRDSF ITHRAFCDAL AQESARLPPP GLTASHLYGA TSAANMGLSL SQVGSHLAST LGADAHSHHQ DLLRLGGGSA ASRLDHLLGP SNAASAFRPL
301: PPPPSSAFLM GAPQEFAGDG DGTGSHGFLQ GKPFHGLMHL PDLQGNGAGG PSASSAPGLF NLGYIANSAN SSGTSSHGHA SQGHLTSDQF SEGGGGGGGG
401: GGGGGGGSES SAAMLFSGGG NFSGGDHQVA PGGMYNNDPA VMLPQMSATA LLQKASQMGS SASAQGGVSV FGGLVGSSAP SAMHARPPML DQSQMHLQSL
501: MNSLAAGGMF GGANSGSMID PRMYDMDQDV KFNQQGGRGG AEMTRDFLGV GGGGVMRGMT VPRGGHQTDG AAGDMSSLEA EMKSASSPFT GSRMQ
101: FQREQNLQLH RRGHNLPWKL KQKDPAQAQR RRVYLCPEPT CAHHDPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKRYAV QSDWKAHSKV CGTREYRCDC
201: GTLFSRRDSF ITHRAFCDAL AQESARLPPP GLTASHLYGA TSAANMGLSL SQVGSHLAST LGADAHSHHQ DLLRLGGGSA ASRLDHLLGP SNAASAFRPL
301: PPPPSSAFLM GAPQEFAGDG DGTGSHGFLQ GKPFHGLMHL PDLQGNGAGG PSASSAPGLF NLGYIANSAN SSGTSSHGHA SQGHLTSDQF SEGGGGGGGG
401: GGGGGGGSES SAAMLFSGGG NFSGGDHQVA PGGMYNNDPA VMLPQMSATA LLQKASQMGS SASAQGGVSV FGGLVGSSAP SAMHARPPML DQSQMHLQSL
501: MNSLAAGGMF GGANSGSMID PRMYDMDQDV KFNQQGGRGG AEMTRDFLGV GGGGVMRGMT VPRGGHQTDG AAGDMSSLEA EMKSASSPFT GSRMQ
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP EAEVIALSPK TLMATNRFLC EICGKGFQRD QNLQLHRRGH NLPWKLKQRT
101: SKEVRKRVYV CPEKSCVHHH PTRALGDLTG IKKHFCRKHG EKKWKCEKCA KRYAVQSDWK AHSKTCGTRE YRCDCGTIFS RRDSFITHRA FCDALAEETA
201: RLNAASHLKS FAATAGSNLN YHYLMGTLIP SPSLPQPPSF PFGPPQPQHH HHHQFPITTN NFDHQDVMKP ASTLSLWSGG NINHHQQVTI EDRMAPQPHS
301: PQEDYNWVFG NANNHGELIT TSDSLITHDN NINIVQSKEN ANGATSLSVP SLFSSVDQIT QDANAASVAV ANMSATALLQ KAAQMGATSS TSPTTTITTD
401: QSAYLQSFAS KSNQIVEDGG SDRFFASFGS NSVELMSNNN NGLHEIGNPR NGVTVVSGMG ELQNYPWKRR RVDIGNAGGG GQTRDFLGVG VQTICHSSSI
501: NGWI
101: SKEVRKRVYV CPEKSCVHHH PTRALGDLTG IKKHFCRKHG EKKWKCEKCA KRYAVQSDWK AHSKTCGTRE YRCDCGTIFS RRDSFITHRA FCDALAEETA
201: RLNAASHLKS FAATAGSNLN YHYLMGTLIP SPSLPQPPSF PFGPPQPQHH HHHQFPITTN NFDHQDVMKP ASTLSLWSGG NINHHQQVTI EDRMAPQPHS
301: PQEDYNWVFG NANNHGELIT TSDSLITHDN NINIVQSKEN ANGATSLSVP SLFSSVDQIT QDANAASVAV ANMSATALLQ KAAQMGATSS TSPTTTITTD
401: QSAYLQSFAS KSNQIVEDGG SDRFFASFGS NSVELMSNNN NGLHEIGNPR NGVTVVSGMG ELQNYPWKRR RVDIGNAGGG GQTRDFLGVG VQTICHSSSI
501: NGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.