Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032922_P001 | Maize | nucleus | 88.32 | 86.7 |
| KRH67268 | Soybean | nucleus | 34.35 | 56.32 |
| TraesCS6D01G116300.1 | Wheat | nucleus | 45.56 | 47.79 |
| TraesCS6B01G154000.1 | Wheat | nucleus | 45.56 | 47.68 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 35.51 | 46.63 |
| TraesCS6A01G126000.1 | Wheat | nucleus | 45.33 | 46.41 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 39.02 | 43.38 |
| Os10t0419200-01 | Rice | nucleus | 44.16 | 39.79 |
| CDX97281 | Canola | nucleus, plastid | 34.58 | 38.44 |
| AT4G02670.2 | Thale cress | nucleus, plastid | 35.51 | 37.62 |
| Bra018535.1-P | Field mustard | plastid | 35.05 | 37.13 |
| CDX91304 | Canola | nucleus, plastid | 34.81 | 36.88 |
| VIT_00s0179g00170.t01 | Wine grape | nucleus, plastid | 37.85 | 36.57 |
| KRG95590 | Soybean | nucleus | 38.78 | 36.09 |
| KRH71370 | Soybean | nucleus | 37.85 | 35.37 |
| KRH32064 | Soybean | nucleus | 37.62 | 34.77 |
| EES02307 | Sorghum | nucleus | 39.02 | 33.53 |
| EES02157 | Sorghum | nucleus | 37.38 | 33.26 |
| PGSC0003DMT400049788 | Potato | nucleus | 36.45 | 32.7 |
| EES00944 | Sorghum | nucleus | 36.68 | 32.64 |
| Solyc09g065670.2.1 | Tomato | nucleus | 35.75 | 32.55 |
| KXG30322 | Sorghum | nucleus | 35.28 | 31.79 |
| EES05153 | Sorghum | nucleus | 35.75 | 31.16 |
| EER95332 | Sorghum | nucleus | 36.68 | 29.9 |
| EES04172 | Sorghum | nucleus | 35.98 | 29.62 |
| OQU89911 | Sorghum | nucleus, plastid | 35.75 | 28.71 |
| KXG25416 | Sorghum | nucleus | 36.22 | 28.03 |
| EES11271 | Sorghum | nucleus | 38.32 | 27.38 |
| KXG31026 | Sorghum | nucleus | 36.45 | 26.22 |
| KXG39813 | Sorghum | nucleus, plastid | 27.57 | 25.71 |
| KXG36163 | Sorghum | nucleus | 34.58 | 25.43 |
| EER96827 | Sorghum | nucleus | 26.4 | 22.65 |
| CDY67587 | Canola | cytosol, nucleus | 11.68 | 22.22 |
| EES13982 | Sorghum | nucleus | 26.17 | 20.9 |
| EER97442 | Sorghum | nucleus | 36.22 | 19.77 |
Protein Annotations
| EnsemblPlants:KXG38489 | EnsemblPlantsGene:SORBI_3001G242900 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF46 |
| PFAM:PF12874 | PFscan:PS50157 | ProteinID:KXG38489 | ProteinID:KXG38489.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0003C6B637 | UniProt:A0A1B6QKP8 | MapMan:15.5.15 | : |
Description
hypothetical protein
Coordinates
chr1:-:25113243..25117555
Molecular Weight (calculated)
46423.9 Da
IEP (calculated)
8.558
GRAVY (calculated)
-0.459
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMMLSDLSS EHEHEATGSS SYGGDMASYA LSPLFLAPAA SATTVLPPAP PHQQPAEEEP NKAAGTKRKR SQPGNPDPGA EVIALSPRTL VATNRFVCEI
101: CNKGFQRDQN LQLHRRGHNL PWKLRHRSSL PSGSSGARQQ GGEAAAPRKR VYVCPEPTCV HHDPARALGD LTGIKKHFSR KHGEKRWRCE RCGKRYAVQS
201: DWKAHVKGCG TREYRCDCGI LFSRKDSLLT HRAFCDALAE ESARLLAAAN NSSTISITTT TSSSNNDLLN TNNIAPLFLP FSNSPPVVAA QQNPNNTLFF
301: LHQELSPFLQ PRMMMQQPSP YLDLHMHVDA SITTTTTTGG GGILTDSPVL SFGLATDGSV ATVGHRRLTR DFLGVDGGGH QVEELPQLPL CATAAAASRT
401: ASCATDLTAR QYLGGRLPPV NETWSHNF
101: CNKGFQRDQN LQLHRRGHNL PWKLRHRSSL PSGSSGARQQ GGEAAAPRKR VYVCPEPTCV HHDPARALGD LTGIKKHFSR KHGEKRWRCE RCGKRYAVQS
201: DWKAHVKGCG TREYRCDCGI LFSRKDSLLT HRAFCDALAE ESARLLAAAN NSSTISITTT TSSSNNDLLN TNNIAPLFLP FSNSPPVVAA QQNPNNTLFF
301: LHQELSPFLQ PRMMMQQPSP YLDLHMHVDA SITTTTTTGG GGILTDSPVL SFGLATDGSV ATVGHRRLTR DFLGVDGGGH QVEELPQLPL CATAAAASRT
401: ASCATDLTAR QYLGGRLPPV NETWSHNF
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.