Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018535.1-P | Field mustard | plastid | 100.0 | 55.69 |
| CDX91304 | Canola | nucleus, plastid | 96.89 | 53.96 |
| CDX97281 | Canola | nucleus, plastid | 89.78 | 52.47 |
| AT4G02670.2 | Thale cress | nucleus, plastid | 77.78 | 43.32 |
| CDY70938 | Canola | cytosol, nucleus | 25.78 | 21.25 |
| KRH67268 | Soybean | nucleus | 19.11 | 16.48 |
| Solyc09g065670.2.1 | Tomato | nucleus | 34.22 | 16.38 |
| PGSC0003DMT400049788 | Potato | nucleus | 34.67 | 16.35 |
| VIT_00s0179g00170.t01 | Wine grape | nucleus, plastid | 32.0 | 16.25 |
| KRH32064 | Soybean | nucleus | 32.89 | 15.98 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 23.11 | 15.95 |
| KRG95590 | Soybean | nucleus | 32.0 | 15.65 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 26.67 | 15.58 |
| KRH71370 | Soybean | nucleus | 31.11 | 15.28 |
| CDX86010 | Canola | nucleus | 28.0 | 14.06 |
| CDX75732 | Canola | nucleus | 27.56 | 14.0 |
| CDY22307 | Canola | nucleus | 28.44 | 13.79 |
| CDX77936 | Canola | nucleus | 26.67 | 13.76 |
| CDX94759 | Canola | nucleus | 28.0 | 13.58 |
| CDY24490 | Canola | nucleus | 26.22 | 13.56 |
| TraesCS6D01G116300.1 | Wheat | nucleus | 24.44 | 13.48 |
| CDY67009 | Canola | nucleus | 28.44 | 13.45 |
| TraesCS6A01G126000.1 | Wheat | nucleus | 24.89 | 13.4 |
| CDX82515 | Canola | nucleus | 26.22 | 13.38 |
| CDY53836 | Canola | nucleus | 26.67 | 13.24 |
| TraesCS6B01G154000.1 | Wheat | nucleus | 24.0 | 13.2 |
| CDY51742 | Canola | nucleus | 28.0 | 13.02 |
| CDX97521 | Canola | nucleus | 28.0 | 12.99 |
| CDY18188 | Canola | nucleus | 27.56 | 12.94 |
| CDX89862 | Canola | nucleus | 27.56 | 12.92 |
| CDX81372 | Canola | nucleus | 27.56 | 12.68 |
| CDY32514 | Canola | nucleus | 27.56 | 12.65 |
| CDY09390 | Canola | nucleus | 6.67 | 12.61 |
| CDY04118 | Canola | nucleus | 6.67 | 12.61 |
| CDY55238 | Canola | nucleus | 27.11 | 12.55 |
| CDY57128 | Canola | nucleus | 27.11 | 12.4 |
| CDY03081 | Canola | nucleus | 28.44 | 12.21 |
| CDY17615 | Canola | nucleus | 28.44 | 12.14 |
| CDY14910 | Canola | nucleus | 7.11 | 12.03 |
| CDX80854 | Canola | nucleus | 26.22 | 11.68 |
| KXG38489 | Sorghum | nucleus | 22.22 | 11.68 |
| CDY10404 | Canola | nucleus | 26.22 | 11.64 |
| CDY11241 | Canola | nucleus | 25.78 | 11.53 |
| CDY15811 | Canola | nucleus | 28.89 | 11.44 |
| CDY44344 | Canola | nucleus | 25.33 | 11.4 |
| CDY17614 | Canola | nucleus, plastid | 25.78 | 11.31 |
| CDY17440 | Canola | nucleus | 24.0 | 11.3 |
| CDY09391 | Canola | nucleus | 28.44 | 11.29 |
| CDX70328 | Canola | nucleus | 25.78 | 11.28 |
| CDY03080 | Canola | nucleus, plastid | 25.33 | 11.05 |
| Zm00001d032922_P001 | Maize | nucleus | 21.33 | 11.01 |
| CDY59418 | Canola | nucleus | 20.0 | 10.9 |
| Os10t0419200-01 | Rice | nucleus | 22.22 | 10.53 |
| CDY45271 | Canola | nucleus | 18.67 | 10.1 |
| CDY68983 | Canola | nucleus | 17.33 | 9.97 |
| CDX81653 | Canola | nucleus | 20.0 | 9.64 |
| CDY45270 | Canola | nucleus | 19.11 | 9.56 |
| CDY15814 | Canola | nucleus | 20.0 | 9.51 |
| CDY04117 | Canola | nucleus | 8.44 | 8.88 |
| CDY37489 | Canola | nucleus | 7.11 | 8.7 |
| CDY12268 | Canola | nucleus | 16.89 | 8.52 |
| CDY72283 | Canola | nucleus | 7.11 | 8.47 |
| CDX96046 | Canola | nucleus | 8.44 | 8.15 |
| CDY53540 | Canola | nucleus | 6.67 | 7.73 |
| CDY04204 | Canola | nucleus | 12.0 | 7.52 |
| CDY36123 | Canola | nucleus | 11.56 | 6.88 |
| CDY51986 | Canola | nucleus | 11.56 | 6.88 |
| CDX84974 | Canola | nucleus | 11.56 | 6.79 |
| CDY07400 | Canola | nucleus | 12.0 | 6.54 |
| CDY60366 | Canola | nucleus | 11.11 | 6.53 |
| CDY04102 | Canola | nucleus | 12.89 | 6.46 |
| CDY63960 | Canola | nucleus | 12.89 | 6.43 |
| CDY09400 | Canola | nucleus | 12.44 | 6.39 |
| CDY60095 | Canola | nucleus | 12.44 | 6.33 |
| CDY15800 | Canola | nucleus | 12.44 | 6.33 |
| CDY17620 | Canola | nucleus | 12.44 | 6.31 |
| CDY04203 | Canola | plastid | 10.67 | 6.23 |
| CDY70142 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY67587 | EnsemblPlantsGene:GSBRNA2T00065143001 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF65 | ProteinID:CDY67587 | ProteinID:CDY67587.1 |
| SEG:seg | UniParc:UPI0004EDEFFE | UniProt:A0A078JQB2 | MapMan:35.1 | : | : |
Description
BnaAnng24690DBnaAnng24690D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQB2]
Coordinates
chrLK036279:+:2..1531
Molecular Weight (calculated)
24150.1 Da
IEP (calculated)
6.735
GRAVY (calculated)
-0.301
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: TKVCGTREYR CDCGTLFSRK DSFITHRAFC DALAEESARI ISTPSTNLTN LSPSFQDRHF MLNKSSSSSL LFTSPPPYVN PAPHPSTAAA LSATALLQKA
101: TALSSGPFGG GGQTRSVGHH RPLTTVNEFL GADRVMMTSS SSSEYDQLVV DGLTSTWQKA DHLTRDFLGL TGHGVHVSVT PGDLLEYAGG VSLPMSTYLT
201: ESHDHESSSS FQKAYDLGFT GPHNM
101: TALSSGPFGG GGQTRSVGHH RPLTTVNEFL GADRVMMTSS SSSEYDQLVV DGLTSTWQKA DHLTRDFLGL TGHGVHVSVT PGDLLEYAGG VSLPMSTYLT
201: ESHDHESSSS FQKAYDLGFT GPHNM
001: MFSSHSLSYK LSSLSTEASA SSGNNTLSTI QEFSGFHNVI SSVCTHTETH KPKKKRGLPG NPDPDAEVIA LSPKTLLATN RFVCEICNKG FQRDQNLQLH
101: RRGHNLPWKL KQKNTKEQQK KKVYVCPETN CAHHHPSRAL GDLTGIKKHF CRKHGEKKWK CEKCSKFYAV QSDWKAHTKI CGTRDYRCDC GTLFSRKDTF
201: ITHRAFCDAL AEESARLHST SSSNLTNPNP NFQGHHFMFN KSSSLLFTSS PLFIEPSLST AALSTPPTAA LSATALLQKA TSLSSTTFGG GGQTRSIGHH
301: RHLTNVNEFL GVDRVMMTSA SSSEYDQLVV DGFTSTWQKA DRLTRDFLGL TGHGGHVSVR PGDMLEYAGG VAFPMSAYDT ESHDHSFQKA YDHLGFSGAH
401: RM
101: RRGHNLPWKL KQKNTKEQQK KKVYVCPETN CAHHHPSRAL GDLTGIKKHF CRKHGEKKWK CEKCSKFYAV QSDWKAHTKI CGTRDYRCDC GTLFSRKDTF
201: ITHRAFCDAL AEESARLHST SSSNLTNPNP NFQGHHFMFN KSSSLLFTSS PLFIEPSLST AALSTPPTAA LSATALLQKA TSLSSTTFGG GGQTRSIGHH
301: RHLTNVNEFL GVDRVMMTSA SSSEYDQLVV DGFTSTWQKA DRLTRDFLGL TGHGGHVSVR PGDMLEYAGG VAFPMSAYDT ESHDHSFQKA YDHLGFSGAH
401: RM
Arabidopsis Description
AtIDD12Indeterminate(ID)-domain 12 [Source:UniProtKB/TrEMBL;Acc:A0A1P8B4I0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.