Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09390 | Canola | nucleus | 32.19 | 63.03 |
| CDY04118 | Canola | nucleus | 32.19 | 63.03 |
| CDY14910 | Canola | nucleus | 34.76 | 60.9 |
| CDY04203 | Canola | plastid | 96.14 | 58.18 |
| CDY07400 | Canola | nucleus | 95.71 | 54.0 |
| Bra004283.1-P | Field mustard | nucleus | 94.42 | 53.4 |
| CDY72283 | Canola | nucleus | 42.49 | 52.38 |
| CDY37489 | Canola | nucleus | 41.2 | 52.17 |
| AT1G68130.1 | Thale cress | nucleus | 90.56 | 50.36 |
| CDY04204 | Canola | nucleus | 77.25 | 50.14 |
| CDY53540 | Canola | nucleus | 38.2 | 45.88 |
| CDY36123 | Canola | nucleus | 73.82 | 45.5 |
| CDY51986 | Canola | nucleus | 73.82 | 45.5 |
| CDY60366 | Canola | nucleus | 74.25 | 45.17 |
| CDX84974 | Canola | nucleus | 74.25 | 45.17 |
| CDY04117 | Canola | nucleus | 40.77 | 44.39 |
| CDY70142 | Canola | nucleus | 32.19 | 41.21 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 63.09 | 39.73 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 62.66 | 38.62 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 62.66 | 38.42 |
| CDY15800 | Canola | nucleus | 72.53 | 38.24 |
| CDY09400 | Canola | nucleus | 71.24 | 37.9 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 69.1 | 37.88 |
| CDY60095 | Canola | nucleus | 71.24 | 37.56 |
| CDY17620 | Canola | nucleus | 71.24 | 37.39 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 61.37 | 37.34 |
| GSMUA_Achr10P... | Banana | nucleus | 60.94 | 37.08 |
| CDY63960 | Canola | nucleus | 71.67 | 37.03 |
| CDY04102 | Canola | nucleus | 71.24 | 36.97 |
| KRH58582 | Soybean | nucleus | 69.53 | 36.82 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 66.52 | 36.56 |
| KRH42485 | Soybean | nucleus | 69.96 | 36.06 |
| Solyc05g054030.2.1 | Tomato | nucleus | 58.37 | 35.7 |
| GSMUA_Achr10P... | Banana | nucleus | 60.94 | 35.59 |
| Zm00001d005871_P002 | Maize | nucleus | 62.66 | 33.11 |
| TraesCS4B01G230800.1 | Wheat | nucleus, plastid | 57.51 | 33.09 |
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 57.94 | 32.61 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 57.94 | 32.53 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 57.94 | 31.76 |
| Os03t0237250-01 | Rice | plastid | 59.23 | 31.51 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 59.23 | 30.8 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 58.8 | 30.31 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 63.52 | 30.14 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 63.52 | 30.14 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 63.52 | 30.08 |
| KXG39813 | Sorghum | nucleus, plastid | 58.37 | 29.63 |
| Zm00001d020683_P001 | Maize | nucleus | 63.09 | 29.58 |
| EER96827 | Sorghum | nucleus | 60.94 | 28.46 |
| Zm00001d031759_P001 | Maize | nucleus | 63.09 | 28.38 |
| Os08t0467100-01 | Rice | nucleus | 63.95 | 27.95 |
| EES13982 | Sorghum | nucleus | 63.52 | 27.61 |
| CDX97281 | Canola | nucleus, plastid | 45.49 | 27.53 |
| CDX91304 | Canola | nucleus, plastid | 45.49 | 26.24 |
| CDY24490 | Canola | nucleus | 43.78 | 23.45 |
| CDX77936 | Canola | nucleus | 43.35 | 23.17 |
| CDX94759 | Canola | nucleus | 45.49 | 22.84 |
| CDY22307 | Canola | nucleus | 45.49 | 22.84 |
| CDX86010 | Canola | nucleus | 43.78 | 22.77 |
| CDX75732 | Canola | nucleus | 42.92 | 22.57 |
| CDY53836 | Canola | nucleus | 43.78 | 22.52 |
| CDX89862 | Canola | nucleus | 46.35 | 22.5 |
| CDY18188 | Canola | nucleus | 45.92 | 22.34 |
| CDY59418 | Canola | nucleus | 39.06 | 22.03 |
| CDX82515 | Canola | nucleus | 41.2 | 21.77 |
| CDY32514 | Canola | nucleus | 45.49 | 21.63 |
| CDY51742 | Canola | nucleus | 44.21 | 21.28 |
| CDY45271 | Canola | nucleus | 37.34 | 20.91 |
| CDX97521 | Canola | nucleus | 43.35 | 20.82 |
| CDY67009 | Canola | nucleus | 42.49 | 20.8 |
| CDY55238 | Canola | nucleus | 43.35 | 20.78 |
| CDY15814 | Canola | nucleus | 41.63 | 20.51 |
| CDX81372 | Canola | nucleus | 42.06 | 20.04 |
| CDY57128 | Canola | nucleus | 42.06 | 19.92 |
| CDX81653 | Canola | nucleus | 39.91 | 19.91 |
| CDY44344 | Canola | nucleus | 42.49 | 19.8 |
| CDY45270 | Canola | nucleus | 38.2 | 19.78 |
| CDX80854 | Canola | nucleus | 42.49 | 19.6 |
| CDY10404 | Canola | nucleus | 42.49 | 19.53 |
| CDY11241 | Canola | nucleus | 42.06 | 19.48 |
| CDY17440 | Canola | nucleus | 39.91 | 19.46 |
| CDY03081 | Canola | nucleus | 43.35 | 19.27 |
| CDX70328 | Canola | nucleus | 42.49 | 19.26 |
| CDY17615 | Canola | nucleus | 43.35 | 19.17 |
| CDY17614 | Canola | nucleus, plastid | 41.63 | 18.91 |
| CDY03080 | Canola | nucleus, plastid | 41.2 | 18.6 |
| CDY09391 | Canola | nucleus | 44.21 | 18.17 |
| CDY15811 | Canola | nucleus | 43.78 | 17.96 |
| CDY12268 | Canola | nucleus | 28.33 | 14.8 |
| CDY68983 | Canola | nucleus | 21.89 | 13.04 |
| CDY70938 | Canola | cytosol, nucleus | 11.59 | 9.89 |
| CDY67587 | Canola | cytosol, nucleus | 8.15 | 8.44 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078E420 | EnsemblPlants:CDX96046 | ProteinID:CDX96046 | ProteinID:CDX96046.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007219 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016607 |
| GO:GO:0045944 | EnsemblPlantsGene:GSBRNA2T00102083001 | InterPro:IPR013087 | InterPro:Neuroggenic_mastermind-like_N | PFAM:PF00096 | PFAM:PF09596 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF43 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0004EE7A79 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
BnaA07g26850D
Coordinates
chrLK031892:-:788544..790306
Molecular Weight (calculated)
26758.6 Da
IEP (calculated)
9.674
GRAVY (calculated)
-0.976
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MINYERSKNT KNINHHRNPP SSSSSDLLPD GNGAAVTQKR KRRPAGTPDP EAEVVALSPR TLLESDRYVC EICNQGFQRD QNLQMHRRRH KVPWKLLKRE
101: TTEEVKKRVY VCPEPTCLHH NPCHALGDLV GIKKHFRRKH SNHKQWICER CSKGYAVQSD YKAHLKTCGT RGHSCDCGRV FSRVESFIEH QDNCTMRQSQ
201: PSSHRVQQQQ QHTANAAQTA STAENIDLYT VII
101: TTEEVKKRVY VCPEPTCLHH NPCHALGDLV GIKKHFRRKH SNHKQWICER CSKGYAVQSD YKAHLKTCGT RGHSCDCGRV FSRVESFIEH QDNCTMRQSQ
201: PSSHRVQQQQ QHTANAAQTA STAENIDLYT VII
001: MELTQPIREN GDPQGHQLTD PDAEVVSLSP RTLLESDRYV CEICNQGFQR DQNLQMHRRR HKVPWKLLKR DKKDEEVRKR VYVCPEPTCL HHDPCHALGD
101: LVGIKKHFRR KHSVHKQWVC ERCSKGYAVQ SDYKAHLKTC GSRGHSCDCG RVFSRVESFI EHQDTCTIRQ PQPTNHRHLQ QHTMGLDAPS RTTSTASFGP
201: LLHGLPLLRP PRPSNQHSPA FAYPFNASSA PFESLELQLS IGMARTSAQA RHNEKRETSL TKERANEEAR KAEETRQEAK RQIEMAEKDF EKAKRIREEA
301: KTELEKAHVV REEAIKRINA TMMEITCHSC KQLFQLPVTA DESTSSLVMS YVSSATTEGE CE
101: LVGIKKHFRR KHSVHKQWVC ERCSKGYAVQ SDYKAHLKTC GSRGHSCDCG RVFSRVESFI EHQDTCTIRQ PQPTNHRHLQ QHTMGLDAPS RTTSTASFGP
201: LLHGLPLLRP PRPSNQHSPA FAYPFNASSA PFESLELQLS IGMARTSAQA RHNEKRETSL TKERANEEAR KAEETRQEAK RQIEMAEKDF EKAKRIREEA
301: KTELEKAHVV REEAIKRINA TMMEITCHSC KQLFQLPVTA DESTSSLVMS YVSSATTEGE CE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.