Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G230800.1 | Wheat | nucleus, plastid | 95.41 | 97.53 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 97.34 | 97.11 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 95.17 | 92.71 |
| Os03t0237250-01 | Rice | plastid | 78.02 | 73.74 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 77.05 | 70.58 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 76.09 | 70.31 |
| KXG39813 | Sorghum | nucleus, plastid | 77.54 | 69.93 |
| CDX96046 | Canola | nucleus | 32.61 | 57.94 |
| Solyc01g005060.2.1 | Tomato | nucleus | 42.75 | 52.21 |
| KRH60588 | Soybean | nucleus | 46.62 | 48.25 |
| KRH41885 | Soybean | nucleus | 43.96 | 47.89 |
| Solyc06g072360.2.1 | Tomato | nucleus | 44.69 | 47.19 |
| Bra010981.1-P | Field mustard | nucleus | 41.79 | 45.77 |
| CDY36123 | Canola | nucleus | 41.79 | 45.77 |
| CDX84974 | Canola | nucleus | 42.27 | 45.69 |
| CDY51986 | Canola | nucleus | 41.55 | 45.5 |
| AT1G25250.3 | Thale cress | nucleus | 42.03 | 45.19 |
| CDY60366 | Canola | nucleus | 41.79 | 45.17 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 46.14 | 44.94 |
| Bra024771.1-P | Field mustard | nucleus | 41.55 | 44.91 |
| CDY04204 | Canola | nucleus | 38.89 | 44.85 |
| PGSC0003DMT400069306 | Potato | nucleus | 44.44 | 44.77 |
| PGSC0003DMT400079735 | Potato | nucleus, plastid | 46.62 | 44.16 |
| KRH58582 | Soybean | nucleus | 45.65 | 42.95 |
| CDY04203 | Canola | plastid | 39.86 | 42.86 |
| Bra026624.1-P | Field mustard | nucleus | 45.17 | 42.69 |
| Bra004050.1-P | Field mustard | nucleus | 42.51 | 42.62 |
| CDY07400 | Canola | nucleus | 42.51 | 42.62 |
| KRH38986 | Soybean | nucleus | 48.55 | 42.41 |
| AT1G68130.1 | Thale cress | nucleus | 42.75 | 42.24 |
| CDY09400 | Canola | nucleus | 44.69 | 42.24 |
| Bra004283.1-P | Field mustard | nucleus | 42.03 | 42.23 |
| VIT_17s0000g01870.t01 | Wine grape | nucleus | 45.89 | 41.76 |
| CDY17620 | Canola | nucleus | 44.69 | 41.67 |
| Bra024841.1-P | Field mustard | nucleus | 44.69 | 41.67 |
| CDY15800 | Canola | nucleus | 44.44 | 41.63 |
| KRH48724 | Soybean | nucleus | 48.31 | 41.41 |
| Bra017432.1-P | Field mustard | nucleus | 43.96 | 41.36 |
| CDY63960 | Canola | nucleus | 44.69 | 41.02 |
| CDY60095 | Canola | nucleus | 43.72 | 40.95 |
| CDY04102 | Canola | nucleus | 44.2 | 40.76 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 48.31 | 40.73 |
| KRH42485 | Soybean | nucleus | 44.44 | 40.71 |
| Solyc03g098070.2.1 | Tomato | nucleus | 35.75 | 40.66 |
| AT2G01940.3 | Thale cress | nucleus | 43.72 | 40.58 |
| Solyc05g054030.2.1 | Tomato | nucleus | 37.2 | 40.42 |
| TraesCS6D01G116300.1 | Wheat | nucleus | 28.26 | 28.68 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 29.47 | 25.0 |
| TraesCS3D01G209800.1 | Wheat | nucleus | 28.5 | 24.89 |
| TraesCS3D01G171300.1 | Wheat | nucleus | 28.74 | 24.24 |
| TraesCS3D01G449900.1 | Wheat | nucleus | 29.47 | 23.97 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 29.47 | 23.19 |
| TraesCS2D01G287500.1 | Wheat | nucleus | 25.36 | 22.78 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 28.99 | 21.94 |
| TraesCS4D01G294900.1 | Wheat | nucleus | 25.6 | 21.9 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 28.02 | 20.07 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 28.5 | 17.82 |
| TraesCS2D01G199300.3 | Wheat | nucleus | 29.71 | 14.56 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G232000.1 | EnsemblPlantsGene:TraesCS4D01G232000 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF30 |
| PFAM:PF00096 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:392537352..392541976
Molecular Weight (calculated)
43948.4 Da
IEP (calculated)
10.086
GRAVY (calculated)
-0.539
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVKSHHQM LASSSTSSSS PSSKQQPPPP PPLAPPPPAT DQPSPAKRKR RPPGTPDPDA EVVALTPRTL LESDRYVCEI CGQGFQREQN LQMHRRRHKV
101: PWRLVKRAPA PSAGEDGGAG TAGGTGATTV PRKRVFVCPE PSCLHHDPAH ALGDLVGIKK HFRRKHGGRR QWVCARCAKG YAVQSDYKAH LKTCGTRGHS
201: CDCGRVFSRV ESFIEHQDAC NSGRMRGEAG AVPSALPVLR PIVIRHPATG VPSTPPPELQ LLPAATKAPV NATPAVFSTS HEPHATTKLE LSIGPVAPSD
301: GVSGADDGRE EVMRAMQEKA AADAERARAR EEAAAAERAL EEARRARQRA RGELEKACAL RDHAARLLAQ VTCHACRQRS FGMVPMGVAA GGDGGHGGSA
401: VACEALRRGG GLGL
101: PWRLVKRAPA PSAGEDGGAG TAGGTGATTV PRKRVFVCPE PSCLHHDPAH ALGDLVGIKK HFRRKHGGRR QWVCARCAKG YAVQSDYKAH LKTCGTRGHS
201: CDCGRVFSRV ESFIEHQDAC NSGRMRGEAG AVPSALPVLR PIVIRHPATG VPSTPPPELQ LLPAATKAPV NATPAVFSTS HEPHATTKLE LSIGPVAPSD
301: GVSGADDGRE EVMRAMQEKA AADAERARAR EEAAAAERAL EEARRARQRA RGELEKACAL RDHAARLLAQ VTCHACRQRS FGMVPMGVAA GGDGGHGGSA
401: VACEALRRGG GLGL
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.