Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 97.53 | 95.41 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 96.54 | 94.22 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 94.32 | 89.88 |
| Os03t0237250-01 | Rice | plastid | 76.79 | 71.0 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 76.05 | 68.14 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 74.81 | 67.63 |
| KXG39813 | Sorghum | nucleus, plastid | 76.3 | 67.32 |
| CDX96046 | Canola | nucleus | 33.09 | 57.51 |
| Solyc01g005060.2.1 | Tomato | nucleus | 43.7 | 52.21 |
| KRH60588 | Soybean | nucleus | 47.65 | 48.25 |
| KRH41885 | Soybean | nucleus | 44.94 | 47.89 |
| Solyc06g072360.2.1 | Tomato | nucleus | 45.68 | 47.19 |
| CDX84974 | Canola | nucleus | 43.21 | 45.69 |
| Bra010981.1-P | Field mustard | nucleus | 42.47 | 45.5 |
| CDY36123 | Canola | nucleus | 42.47 | 45.5 |
| CDY51986 | Canola | nucleus | 42.22 | 45.24 |
| CDY60366 | Canola | nucleus | 42.72 | 45.17 |
| CDY04204 | Canola | nucleus | 40.0 | 45.13 |
| AT1G25250.3 | Thale cress | nucleus | 42.72 | 44.94 |
| Bra024771.1-P | Field mustard | nucleus | 42.47 | 44.91 |
| PGSC0003DMT400069306 | Potato | nucleus | 45.43 | 44.77 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 46.91 | 44.71 |
| PGSC0003DMT400079735 | Potato | nucleus, plastid | 47.9 | 44.39 |
| CDY04203 | Canola | plastid | 40.74 | 42.86 |
| KRH58582 | Soybean | nucleus | 46.42 | 42.73 |
| CDY07400 | Canola | nucleus | 43.46 | 42.62 |
| Bra004050.1-P | Field mustard | nucleus | 43.46 | 42.62 |
| KRH38986 | Soybean | nucleus | 49.63 | 42.41 |
| AT1G68130.1 | Thale cress | nucleus | 43.7 | 42.24 |
| Bra026624.1-P | Field mustard | nucleus | 45.68 | 42.24 |
| Bra004283.1-P | Field mustard | nucleus | 42.96 | 42.23 |
| CDY09400 | Canola | nucleus | 45.19 | 41.78 |
| VIT_17s0000g01870.t01 | Wine grape | nucleus | 46.67 | 41.54 |
| KRH48724 | Soybean | nucleus | 49.38 | 41.41 |
| CDY17620 | Canola | nucleus | 45.19 | 41.22 |
| Bra024841.1-P | Field mustard | nucleus | 45.19 | 41.22 |
| CDY15800 | Canola | nucleus | 44.94 | 41.18 |
| Bra017432.1-P | Field mustard | nucleus | 44.69 | 41.14 |
| Solyc03g098070.2.1 | Tomato | nucleus | 36.79 | 40.93 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 49.38 | 40.65 |
| CDY63960 | Canola | nucleus | 45.19 | 40.58 |
| CDY60095 | Canola | nucleus | 44.2 | 40.5 |
| KRH42485 | Soybean | nucleus | 45.19 | 40.49 |
| Solyc05g054030.2.1 | Tomato | nucleus | 38.02 | 40.42 |
| CDY04102 | Canola | nucleus | 44.69 | 40.31 |
| AT2G01940.3 | Thale cress | nucleus | 44.2 | 40.13 |
| TraesCS6B01G154000.1 | Wheat | nucleus | 29.38 | 29.1 |
| TraesCS3B01G123600.1 | Wheat | nucleus | 30.62 | 24.95 |
| TraesCS3B01G237700.1 | Wheat | nucleus | 28.89 | 24.79 |
| TraesCS3B01G497200.1 | Wheat | nucleus | 30.37 | 24.07 |
| TraesCS3B01G195900.1 | Wheat | nucleus | 28.89 | 23.83 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 30.37 | 23.3 |
| TraesCS4B01G296200.1 | Wheat | nucleus | 26.42 | 22.11 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 29.63 | 21.98 |
| TraesCS2B01G306100.1 | Wheat | nucleus | 25.93 | 21.74 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 28.64 | 20.14 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 29.14 | 19.28 |
| TraesCS2B01G218900.1 | Wheat | nucleus | 30.62 | 15.46 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G230800.1 | EnsemblPlantsGene:TraesCS4B01G230800 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF30 |
| PFAM:PF00096 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:482137188..482141386
Molecular Weight (calculated)
42925.2 Da
IEP (calculated)
9.990
GRAVY (calculated)
-0.523
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAPSSTSSS SPSPLQQPPP PPPLVPPPPA TDQPSPAKRK RRPPGTPDPD AEVVALTPRT LLESDRYVCE ICGQGFQREQ NLQMHRRRHK VPWRLVKRAP
101: APSAGEDGGA GTAGGAGATT VPRKRVFVCP EPSCLHHDPA HALGDLVGIK KHFRRKHGGR RQWVCARCAK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR
201: VESFIEHQDA CNSGRMRGEA GAVPSALPML RPIVIRHPAT GVPSTPPPEL QLLPAATKAP VNATPAVFSA SHEPHATTKL ELSIGPVASS DSVSGADDGR
301: EEVMRAMQEK AAADAERARA REEAAAAERA LEEARRARQR ARGELEKACA LRDHAARLLA QVTCHACRQR SFGMVPMGVA AGGDGGHGGS AVASEALRRG
401: GGLGL
101: APSAGEDGGA GTAGGAGATT VPRKRVFVCP EPSCLHHDPA HALGDLVGIK KHFRRKHGGR RQWVCARCAK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR
201: VESFIEHQDA CNSGRMRGEA GAVPSALPML RPIVIRHPAT GVPSTPPPEL QLLPAATKAP VNATPAVFSA SHEPHATTKL ELSIGPVASS DSVSGADDGR
301: EEVMRAMQEK AAADAERARA REEAAAAERA LEEARRARQR ARGELEKACA LRDHAARLLA QVTCHACRQR SFGMVPMGVA AGGDGGHGGS AVASEALRRG
401: GGLGL
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.