Factsheet for Bra004050.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07400	Canola	nucleus	100.0	100.0
CDY04204	Canola	nucleus	85.71	98.61
Bra004283.1-P	Field mustard	nucleus	92.01	92.23
AT1G68130.1	Thale cress	nucleus	87.65	86.4
Bra024771.1-P	Field mustard	nucleus	58.35	62.92
Bra010981.1-P	Field mustard	nucleus	56.17	61.38
VIT_01s0011g06400.t01	Wine grape	nucleus	57.14	55.53
Bra036013.1-P	Field mustard	nucleus	20.82	54.43
GSMUA_Achr6P02490_001	Banana	nucleus	48.18	53.78
GSMUA_Achr7P18610_001	Banana	nucleus	48.18	52.65
Bra017432.1-P	Field mustard	nucleus	55.93	52.5
KRH58582	Soybean	nucleus	55.93	52.5
GSMUA_Achr5P23130_001	Banana	nucleus	47.94	52.11
Bra026624.1-P	Field mustard	nucleus	55.21	52.05
Bra024841.1-P	Field mustard	nucleus	55.69	51.8
KRH42485	Soybean	nucleus	56.42	51.55
GSMUA_Achr10P...	Banana	nucleus	46.49	50.13
GSMUA_Achr3P20220_001	Banana	nucleus	49.64	48.35
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	43.34	46.74
GSMUA_Achr10P...	Banana	nucleus	43.58	45.11
Solyc05g054030.2.1	Tomato	nucleus	40.92	44.36
Zm00001d005871_P002	Maize	nucleus	46.73	43.76
TraesCS4B01G230800.1	Wheat	nucleus, plastid	42.62	43.46
TraesCS4D01G232000.1	Wheat	nucleus, plastid	42.62	42.51
TraesCS4A01G074700.1	Wheat	nucleus, plastid	42.37	42.17
TraesCS5A01G233700.1	Wheat	nucleus	50.12	42.16
TraesCS5D01G240600.1	Wheat	nucleus	49.88	41.96
Os03t0237250-01	Rice	plastid	44.31	41.78
HORVU4Hr1G064740.2	Barley	nucleus, plastid	42.86	41.65
TraesCS5B01G232200.1	Wheat	nucleus	49.39	41.46
Zm00001d020683_P001	Maize	nucleus	49.15	40.85
EER96827	Sorghum	nucleus	49.15	40.68
Zm00001d028361_P001	Maize	nucleus, plastid	44.31	40.49
Zm00001d031759_P001	Maize	nucleus	49.64	39.58
Zm00001d047976_P001	Maize	nucleus, plastid	42.86	39.51
EES13982	Sorghum	nucleus	50.85	39.18
Os08t0467100-01	Rice	nucleus	50.36	39.02
KXG39813	Sorghum	nucleus, plastid	43.1	38.78
Bra018535.1-P	Field mustard	plastid	27.36	27.97
Bra036098.1-P	Field mustard	nucleus, plastid	27.84	26.38
Bra030886.1-P	Field mustard	nucleus	26.88	25.4
Bra033724.1-P	Field mustard	nucleus	28.09	25.0
Bra033840.1-P	Field mustard	nucleus	26.63	24.28
Bra015271.1-P	Field mustard	nucleus	28.09	24.07
Bra032541.1-P	Field mustard	nucleus	27.6	23.27
Bra021510.1-P	Field mustard	nucleus	27.6	22.35
Bra027394.1-P	Field mustard	nucleus	26.88	21.98
Bra037151.1-P	Field mustard	nucleus	26.15	21.95
Bra026819.1-P	Field mustard	nucleus	24.7	21.84
Bra026616.1-P	Field mustard	nucleus	26.63	21.53
Bra026204.1-P	Field mustard	nucleus, plastid	23.24	21.33
Bra001523.1-P	Field mustard	nucleus	26.39	21.29
Bra009549.1-P	Field mustard	nucleus	26.39	21.12
Bra005741.1-P	Field mustard	nucleus	25.67	21.03
Bra026203.1-P	Field mustard	nucleus, plastid	23.0	20.47
Bra024833.1-P	Field mustard	plastid	25.42	20.47
Bra024834.1-P	Field mustard	nucleus, plastid	26.15	19.57
Bra023223.1-P	Field mustard	plastid	22.28	19.17
Bra026617.1-P	Field mustard	nucleus	27.12	18.98
Bra040974.1-P	Field mustard	nucleus, plastid	26.88	18.97
Bra038293.1-P	Field mustard	nucleus	26.39	12.3

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EnsemblPlantsGene:Bra004050	EnsemblPlants:Bra004050.1	EnsemblPlants:Bra004050.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003713	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0007154	GO:GO:0007165
GO:GO:0007219	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016607
GO:GO:0045944	InterPro:IPR013087	UniProt:M4CIL6	InterPro:Neuroggenic_mastermind-like_N	PFAM:PF09596	PFAM:PF12874
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF43	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI0002541316	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

AT1G68130 (E=5e-178) AtIDD14 | AtIDD14 (Arabidopsis thaliana Indeterminate(ID)-Domain 14); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA07:-:16539634..16541594

Molecular Weight (calculated)

46183.3 Da

IEP (calculated)

8.744

GRAVY (calculated)

-0.840

Length

413 amino acids

Sequence
(BLAST)

001: MIDYERSNNT KNINHHRNPP PSSSSSDLLP DGNGAAVTQK RKRRPAGTPD PEAEVVSLSP RTLLESDRYV CEICNQGFQR DQNLQMHRRR HKVPWKLLKR
101: ETNEEVKKRV YVCPEPTCLH HNPCHALGDL VGIKKHFRRK HSNHKQWICE RCSKGYAVQS DYKAHLKTCG TRGHSCDCGR VFSRVESFIE HQDNCTMRQP
201: QPSSHRLQQQ QQHTANAAQT ASTAENIDLN IGPVLPGHPL LRQSPPSDQQ PSDLLYPFVG SSASTGSGIE LQLLPSRASA DGTSLSLSIG MDTTMSSYEK
301: GETSLLLGER EEAKRQIEIA ELEYAEAKRI RQHARGELHK AQLYREEARR RISATIMQIT CHNCKKHFQA VAASSPSPRL PQPPCTDEST SLAVSYVSSA
401: TTEGEKASDR ASS

Best Arabidopsis Sequence Match ( AT1G68130.1 )
(BLAST)

001: MIDYERSNTT KNINTHHHNP PPSSSSSDLL PDGNGTAVTQ KRKRRPAGTP DPEAEVVSLS PRTLLESDRY VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS

Arabidopsis Description

IDD14Protein indeterminate-domain 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.