Factsheet for Bra036013.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001446.1-P
Bra014251.1-P
Bra018848.1-P
Bra034764.1-P
Bra038707.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44160.1	Bra014251.1-P	AT1G50420.1	21798944
AT5G44160.1	Bra018848.1-P	AT1G50420.1	21798944
AT5G44160.1	Bra001446.1-P	AT3G12280.1	22921914
AT5G44160.1	Bra034764.1-P	AT3G12280.1	22921914
AT5G44160.1	Bra038707.1-P	AT3G12280.1	22921914

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14910	Canola	nucleus	81.65	96.99
GSMUA_Achr7P14780_001	Banana	nucleus	72.15	31.93
Zm00001d039254_P001	Maize	nucleus	65.19	29.1
GSMUA_Achr9P06650_001	Banana	nucleus	66.46	28.61
AT5G44160.1	Thale cress	nucleus	83.54	28.33
Bra033724.1-P	Field mustard	nucleus	82.91	28.23
Os01t0242200-01	Rice	nucleus	72.78	27.71
VIT_12s0028g03030.t01	Wine grape	nucleus	74.05	27.4
GSMUA_Achr6P27030_001	Banana	nucleus	59.49	26.55
GSMUA_Achr10P...	Banana	nucleus	63.29	26.53
KRH22332	Soybean	nucleus	76.58	25.53
Bra018535.1-P	Field mustard	plastid	65.19	25.5
Bra015271.1-P	Field mustard	nucleus	76.58	25.1
PGSC0003DMT400024272	Potato	nucleus	78.48	25.05
KRH26995	Soybean	nucleus	75.95	25.0
Zm00001d009030_P002	Maize	nucleus	70.25	24.83
Bra032541.1-P	Field mustard	nucleus	76.58	24.69
Bra036098.1-P	Field mustard	nucleus, plastid	67.72	24.54
Solyc07g053570.2.1	Tomato	nucleus	77.85	24.5
Bra030886.1-P	Field mustard	nucleus	67.09	24.26
Bra033840.1-P	Field mustard	nucleus	68.35	23.84
EES02157	Sorghum	nucleus	71.52	23.49
TraesCS3A01G170700.1	Wheat	nucleus	72.15	23.31
TraesCS3B01G195900.1	Wheat	nucleus	72.15	23.22
TraesCS3D01G171300.1	Wheat	nucleus	72.15	23.22
Bra026819.1-P	Field mustard	nucleus	67.09	22.7
Bra037151.1-P	Field mustard	nucleus	69.62	22.36
Bra010981.1-P	Field mustard	nucleus	53.16	22.22
Bra024771.1-P	Field mustard	nucleus	53.16	21.93
Bra027394.1-P	Field mustard	nucleus	68.35	21.39
Bra021510.1-P	Field mustard	nucleus	68.99	21.37
Bra026204.1-P	Field mustard	nucleus, plastid	60.76	21.33
Bra004283.1-P	Field mustard	nucleus	55.06	21.12
Bra026616.1-P	Field mustard	nucleus	67.72	20.94
Bra026203.1-P	Field mustard	nucleus, plastid	61.39	20.91
Bra004050.1-P	Field mustard	nucleus	54.43	20.82
Bra001523.1-P	Field mustard	nucleus	67.09	20.7
Bra005741.1-P	Field mustard	nucleus	65.82	20.63
Bra024833.1-P	Field mustard	plastid	65.19	20.08
Bra009549.1-P	Field mustard	nucleus	65.19	19.96
Bra024834.1-P	Field mustard	nucleus, plastid	67.09	19.2
Bra017432.1-P	Field mustard	nucleus	53.16	19.09
Bra026624.1-P	Field mustard	nucleus	52.53	18.95
Bra024841.1-P	Field mustard	nucleus	53.16	18.92
Bra040974.1-P	Field mustard	nucleus, plastid	67.72	18.29
Bra026617.1-P	Field mustard	nucleus	67.72	18.14
Bra023223.1-P	Field mustard	plastid	55.06	18.12
Os07t0581366-00	Rice	cytosol, nucleus	57.59	14.35
Zm00001d006682_P001	Maize	nucleus	65.82	14.02
EER97442	Sorghum	nucleus	65.19	13.14
TraesCS2B01G218900.1	Wheat	nucleus	65.19	12.84
Zm00001d021932_P001	Maize	nucleus	65.19	12.64
TraesCS2A01G188400.2	Wheat	nucleus	65.19	12.41
TraesCS2D01G199300.3	Wheat	nucleus	65.19	12.19
Bra038293.1-P	Field mustard	nucleus	66.46	11.85
HORVU2Hr1G036710.3	Barley	nucleus	50.63	9.22

Protein Annotations

EnsemblPlants:Bra036013.1	EnsemblPlants:Bra036013.1-P	EnsemblPlantsGene:Bra036013	ncoils:Coil	PANTHER:PTHR10593	PANTHER:PTHR10593:SF26
UniParc:UPI000253E676	UniProt:M4F4L3	MapMan:15.5.15	:	:	:

Description

AT5G44160 (E=9e-072) NUC | NUC (nutcracker); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrScaffold000111:+:542954..543793

Molecular Weight (calculated)

18295.1 Da

IEP (calculated)

10.326

GRAVY (calculated)

-0.947

Length

158 amino acids

Sequence
(BLAST)

001: MTDESLINPP PVKKKRNLPE NPDPEAEVIA LSPKTLMATN RSYARYVATV SKETKTYSYI QLHRRGHNLP SKLKQRTSKE VRKRVYVCPE QTCVHHHSSR
101: ALGDLTGIKK HFCRKHSEKK WKCEKCAKRY AVLSDYKAHS KTCGTREYRC DCGTIFSR

Best Arabidopsis Sequence Match ( AT1G03840.1 )
(BLAST)

001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI

Arabidopsis Description

MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.