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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70938 Canola cytosol, nucleus 62.24 99.63
CDY70142 Canola nucleus 37.07 89.01
AT1G55110.2 Thale cress nucleus 84.21 80.88
Bra036013.1-P Field mustard nucleus 24.26 67.09
Bra027394.1-P Field mustard nucleus 67.28 58.22
Bra021510.1-P Field mustard nucleus 67.05 57.45
Bra001523.1-P Field mustard nucleus 65.45 55.86
Bra018535.1-P Field mustard plastid 38.44 41.58
Bra036098.1-P Field mustard nucleus, plastid 40.73 40.83
KRH23306 Soybean nucleus 43.94 40.0
KRH10015 Soybean nucleus 43.02 39.58
KRH47108 Soybean nucleus 44.16 38.76
Bra015271.1-P Field mustard nucleus 42.33 38.38
Bra032541.1-P Field mustard nucleus 42.33 37.76
Bra033840.1-P Field mustard nucleus 39.13 37.75
TraesCS3D01G107300.1 Wheat nucleus 42.11 37.7
Bra005741.1-P Field mustard nucleus 43.48 37.7
Zm00001d008842_P001 Maize nucleus 40.27 37.69
Os01t0195000-01 Rice nucleus 41.88 37.58
TraesCS3A01G105100.1 Wheat nucleus 42.33 37.3
TraesCS3B01G123600.1 Wheat nucleus 42.33 37.22
Bra033724.1-P Field mustard nucleus 39.36 37.07
Bra009549.1-P Field mustard nucleus 43.48 36.82
Bra037151.1-P Field mustard nucleus 41.42 36.79
EES02307 Sorghum nucleus 41.65 36.55
KRH44134 Soybean nucleus 43.94 36.23
Zm00001d039467_P001 Maize nucleus 40.96 36.02
PGSC0003DMT400012504 Potato nucleus 39.59 34.46
Solyc06g062670.2.1 Tomato nucleus 39.59 34.39
PGSC0003DMT400006385 Potato nucleus 42.56 34.38
Solyc03g121660.2.1 Tomato nucleus 42.56 34.32
Bra024834.1-P Field mustard nucleus, plastid 42.56 33.7
Bra026616.1-P Field mustard nucleus 38.9 33.27
Bra026819.1-P Field mustard nucleus 35.47 33.19
Bra024833.1-P Field mustard plastid 38.9 33.14
Bra026204.1-P Field mustard nucleus, plastid 33.87 32.89
Bra026617.1-P Field mustard nucleus 42.11 31.19
Bra040974.1-P Field mustard nucleus, plastid 41.65 31.11
Bra026203.1-P Field mustard nucleus, plastid 32.49 30.6
Bra024771.1-P Field mustard nucleus 24.71 28.2
Bra010981.1-P Field mustard nucleus 23.8 27.51
Bra023223.1-P Field mustard plastid 29.75 27.08
Bra004283.1-P Field mustard nucleus 25.4 26.94
Bra026624.1-P Field mustard nucleus 27.0 26.94
Bra004050.1-P Field mustard nucleus 25.4 26.88
Bra017432.1-P Field mustard nucleus 27.0 26.82
Bra024841.1-P Field mustard nucleus 27.0 26.58
Bra038293.1-P Field mustard nucleus 38.9 19.19
Protein Annotations
EnsemblPlants:Bra030886.1EnsemblPlants:Bra030886.1-PEnsemblPlantsGene:Bra030886Gene3D:3.30.160.60GO:GO:0003674GO:GO:0003676
GO:GO:0005488GO:GO:0046872InterPro:IPR013087InterPro:Znf_C2H2_jazInterPro:Znf_C2H2_sfInterPro:Znf_C2H2_type
PANTHER:PTHR10593PANTHER:PTHR10593:SF49PFAM:PF12171PFscan:PS50157ScanProsite:PS00028SEG:seg
SMART:SM00355SUPFAM:SSF57667UniParc:UPI000254724BUniProt:M4EQ15MapMan:15.5.15:
Description
AT1G55110 (E=2e-186) AtIDD7 | AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7); nucleic acid binding / transcription factor/ zinc ion binding
Coordinates
chrA08:+:546451..548380
Molecular Weight (calculated)
48847.6 Da
IEP (calculated)
7.960
GRAVY (calculated)
-0.955
Length
437 amino acids
Sequence
(BLAST)
001: MSNLTSASGD HASVSSGNRT ETSGSNFHYN TNPNQQQEEQ CLAPQPSQKK KRNQPGNPDP EAEVLALSPK TLMATNRFIC EICNKGFQRD QNLQLHKRGH
101: NLPWKLKQRS NKDVIRKKVY VCPEPNCVHH HPSRALGDLT GIKKHFFRKH GEKKWKCDKC SKKYAVQSDW KAHAKTCGTK EYKCDCGTLF SRRDSFITHR
201: AFCDALAEES ARAIPNPILI QSSSPHQTQH NINFSSSSQN ITSHNNNPHG HDELPMKQEE PHHHFHNIPP WLISSNPNPN GNNANYFPLA SSSANFHHPS
301: PAMSATALLQ KAAQMGPSKS TTTPEEDEKS SYNKLITTTM AASMMTSPSE PGFGFQDYYM MNHHAHHHDG VGEAFDGGFN AGDERNDVVD DSGGETRDFL
401: GLRPLMSHNE ILSFANNLGN CINTSASEQQ QRYSHQD
Best Arabidopsis Sequence Match ( AT1G55110.2 )
(BLAST)
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.