Factsheet for Bra004283.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96046	Canola	nucleus	53.4	94.42
Bra004050.1-P	Field mustard	nucleus	92.23	92.01
AT1G68130.1	Thale cress	nucleus	87.62	86.16
Bra024771.1-P	Field mustard	nucleus	58.01	62.4
Bra010981.1-P	Field mustard	nucleus	56.07	61.11
VIT_01s0011g06400.t01	Wine grape	nucleus	57.04	55.29
Bra036013.1-P	Field mustard	nucleus	21.12	55.06
GSMUA_Achr6P02490_001	Banana	nucleus	48.06	53.51
GSMUA_Achr7P18610_001	Banana	nucleus	48.06	52.38
KRH58582	Soybean	nucleus	55.83	52.27
Bra017432.1-P	Field mustard	nucleus	55.1	51.59
GSMUA_Achr5P23130_001	Banana	nucleus	47.57	51.58
Bra026624.1-P	Field mustard	nucleus	54.61	51.37
Bra024841.1-P	Field mustard	nucleus	55.34	51.35
KRH42485	Soybean	nucleus	56.31	51.33
GSMUA_Achr10P...	Banana	nucleus	46.6	50.13
GSMUA_Achr3P20220_001	Banana	nucleus	49.27	47.88
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	43.93	47.26
GSMUA_Achr10P...	Banana	nucleus	44.17	45.61
Solyc05g054030.2.1	Tomato	nucleus	41.02	44.36
Zm00001d005871_P002	Maize	nucleus	46.12	43.08
TraesCS4B01G230800.1	Wheat	nucleus, plastid	42.23	42.96
TraesCS4D01G232000.1	Wheat	nucleus, plastid	42.23	42.03
TraesCS4A01G074700.1	Wheat	nucleus, plastid	41.99	41.69
TraesCS5A01G233700.1	Wheat	nucleus	49.51	41.55
TraesCS5D01G240600.1	Wheat	nucleus	49.51	41.55
HORVU4Hr1G064740.2	Barley	nucleus, plastid	42.72	41.41
Os03t0237250-01	Rice	plastid	43.93	41.32
TraesCS5B01G232200.1	Wheat	nucleus	49.27	41.26
Zm00001d028361_P001	Maize	nucleus, plastid	44.66	40.71
Zm00001d020683_P001	Maize	nucleus	48.54	40.24
EER96827	Sorghum	nucleus	48.54	40.08
Zm00001d047976_P001	Maize	nucleus, plastid	43.45	39.96
KXG39813	Sorghum	nucleus, plastid	43.69	39.22
Zm00001d031759_P001	Maize	nucleus	49.03	39.0
Os08t0467100-01	Rice	nucleus	50.0	38.65
EES13982	Sorghum	nucleus	49.76	38.25
Bra018535.1-P	Field mustard	plastid	27.91	28.47
Bra036098.1-P	Field mustard	nucleus, plastid	28.16	26.61
Bra033724.1-P	Field mustard	nucleus	28.88	25.65
Bra030886.1-P	Field mustard	nucleus	26.94	25.4
Bra033840.1-P	Field mustard	nucleus	27.18	24.72
Bra015271.1-P	Field mustard	nucleus	28.64	24.48
Bra032541.1-P	Field mustard	nucleus	27.91	23.47
Bra021510.1-P	Field mustard	nucleus	27.67	22.35
Bra037151.1-P	Field mustard	nucleus	26.46	22.15
Bra027394.1-P	Field mustard	nucleus	26.94	21.98
Bra026616.1-P	Field mustard	nucleus	26.94	21.72
Bra001523.1-P	Field mustard	nucleus	26.7	21.48
Bra026819.1-P	Field mustard	nucleus	24.27	21.41
Bra009549.1-P	Field mustard	nucleus	26.46	21.12
Bra026204.1-P	Field mustard	nucleus, plastid	23.06	21.11
Bra005741.1-P	Field mustard	nucleus	25.73	21.03
Bra024833.1-P	Field mustard	plastid	25.97	20.86
Bra026203.1-P	Field mustard	nucleus, plastid	22.82	20.26
Bra024834.1-P	Field mustard	nucleus, plastid	26.46	19.75
Bra026617.1-P	Field mustard	nucleus	27.67	19.32
Bra040974.1-P	Field mustard	nucleus, plastid	27.43	19.32
Bra023223.1-P	Field mustard	plastid	22.33	19.17
Bra038293.1-P	Field mustard	nucleus	26.7	12.42

Protein Annotations

EnsemblPlants:Bra004283.1	EnsemblPlants:Bra004283.1-P	EnsemblPlantsGene:Bra004283	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	ncoils:Coil	PANTHER:PTHR10593
PANTHER:PTHR10593:SF43	PFAM:PF12874	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI00025416DE	UniProt:M4CJ99	MapMan:15.5.15	:	:

Description

AT1G68130 (E=2e-179) AtIDD14 | AtIDD14 (Arabidopsis thaliana Indeterminate(ID)-Domain 14); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA07:+:17772970..17774962

Molecular Weight (calculated)

45965.3 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.762

Length

412 amino acids

Sequence
(BLAST)

001: MIDYERSKNT KNINHHRNPP SSSSSDLLPD GNGAAVTQKR KRRPAGTPDP EAEVVALSPR TLLESDRYVC EICNQGFQRD QNLQMHRRRH KVPWKLLKRE
101: TTEEVKKRVY VCPEPTCLHH NPCHALGDLV GIKKHFRRKH SNHKQWICER CSKGYAVQSD YKAHLKTCGT RGHSCDCGRV FSRVESFIEH QDHCTMRRSQ
201: PSGHRLQQQQ QHTANATQTA SVAKNVDLSV GPVLPGHPLL RQAPPSGQQT SDLLYPFVGS CATTGSSIEL QLLPSRASAD ETSLSLSIGM EPTTSSYEKG
301: ETSLLLGQRE EAKRQIEIAE LEFAEAKRIR QHAKAELHKA QLYREEASRR ISATMMQITC HNCKKHFQAV AASAPPPILP QPPCTDESTS LAVSYVSSAT
401: TEGEKASDRA SS

Best Arabidopsis Sequence Match ( AT1G68130.1 )
(BLAST)

001: MIDYERSNTT KNINTHHHNP PPSSSSSDLL PDGNGTAVTQ KRKRRPAGTP DPEAEVVSLS PRTLLESDRY VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS

Arabidopsis Description

IDD14Protein indeterminate-domain 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.