Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039467_P001 | Maize | nucleus | 92.97 | 93.16 |
| Zm00001d008842_P001 | Maize | nucleus | 84.54 | 90.15 |
| Os01t0195000-01 | Rice | nucleus | 72.49 | 74.13 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 70.48 | 71.93 |
| TraesCS3B01G123600.1 | Wheat | nucleus | 71.49 | 71.63 |
| TraesCS3A01G105100.1 | Wheat | nucleus | 71.08 | 71.37 |
| CDY70142 | Canola | nucleus | 21.49 | 58.79 |
| KRH10015 | Soybean | nucleus | 41.57 | 43.58 |
| KRH47108 | Soybean | nucleus | 43.57 | 43.57 |
| KRH23306 | Soybean | nucleus | 41.57 | 43.12 |
| AT1G55110.2 | Thale cress | nucleus | 38.15 | 41.76 |
| Bra030886.1-P | Field mustard | nucleus | 36.55 | 41.65 |
| EES00944 | Sorghum | nucleus | 39.96 | 41.37 |
| KRH44134 | Soybean | nucleus | 43.37 | 40.75 |
| EES02157 | Sorghum | nucleus | 39.36 | 40.75 |
| VIT_09s0002g02300.t01 | Wine grape | nucleus | 42.77 | 40.04 |
| KXG38489 | Sorghum | nucleus | 33.53 | 39.02 |
| PGSC0003DMT400012504 | Potato | nucleus | 38.55 | 38.25 |
| PGSC0003DMT400006385 | Potato | nucleus | 41.37 | 38.08 |
| Solyc06g062670.2.1 | Tomato | nucleus | 38.35 | 37.97 |
| KXG30322 | Sorghum | nucleus | 36.14 | 37.89 |
| Solyc03g121660.2.1 | Tomato | nucleus | 41.16 | 37.82 |
| EES05153 | Sorghum | nucleus | 36.35 | 36.86 |
| EER95332 | Sorghum | nucleus | 38.15 | 36.19 |
| OQU89911 | Sorghum | nucleus, plastid | 38.55 | 36.02 |
| EES04172 | Sorghum | nucleus | 37.35 | 35.77 |
| KXG25416 | Sorghum | nucleus | 39.16 | 35.26 |
| EES11271 | Sorghum | nucleus | 40.16 | 33.39 |
| KXG31026 | Sorghum | nucleus | 38.76 | 32.44 |
| KXG36163 | Sorghum | nucleus | 35.94 | 30.76 |
| CDY70938 | Canola | cytosol, nucleus | 15.66 | 28.57 |
| KXG39813 | Sorghum | nucleus, plastid | 25.9 | 28.1 |
| EER96827 | Sorghum | nucleus | 25.3 | 25.25 |
| EES13982 | Sorghum | nucleus | 25.7 | 23.88 |
| EER97442 | Sorghum | nucleus | 35.34 | 22.45 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:8082835 | UniProt:C5XLW5 | EnsemblPlants:EES02307 | ProteinID:EES02307 |
| ProteinID:EES02307.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF49 | SMART:SM00355 | EnsemblPlantsGene:SORBI_3003G031800 | SUPFAM:SSF57667 |
| UniParc:UPI0001A84F67 | RefSeq:XP_002457187.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:2929448..2934406
Molecular Weight (calculated)
52679.6 Da
IEP (calculated)
8.805
GRAVY (calculated)
-0.584
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLKDLAAIQ QHQHHQQLQL AAAADENMSN LTSASGDQAS VSSHPAPPPA KKKRSLPGNP DPDAEVIALS PRTLMATNRY VCEVCGKGFQ RDQNLQLHRR
101: GHNLPWKLKQ RNPKEVVRKK VYVCPEPGCV HHDPARALGD LTGIKKHFSR KHGEKKWKCD RCAKRYAVHS DWKAHSKVCG TREYRCDCGT LFSRRDSFIT
201: HRAFCDALAE ESARAVTAAA AVVAGQQHHP GMLFSQAGGG GGDGSAGLHL PPGVLDPSQT LGGGHGMSLQ ELCLKREQQQ QQQFAPSSWL TAHRQQELEL
301: PGAGNSAVFG SARPLDQQDY MGSSTHESTA GLSGFVGFSS PSAAGGGAAS AHMSATALLQ KAAQMGATLS RPSNQGQMAS THSTTTTTNA GTGAANAAAA
401: SNVPGTGAGA LGFGAPHHFG AEERTTRPDH RDAGNGGNAA TGGGNEGLTR DFLGLRAFSH GDILSMAGFD PCMSSASSAA YEQGHHHHHH QSSKQWHV
101: GHNLPWKLKQ RNPKEVVRKK VYVCPEPGCV HHDPARALGD LTGIKKHFSR KHGEKKWKCD RCAKRYAVHS DWKAHSKVCG TREYRCDCGT LFSRRDSFIT
201: HRAFCDALAE ESARAVTAAA AVVAGQQHHP GMLFSQAGGG GGDGSAGLHL PPGVLDPSQT LGGGHGMSLQ ELCLKREQQQ QQQFAPSSWL TAHRQQELEL
301: PGAGNSAVFG SARPLDQQDY MGSSTHESTA GLSGFVGFSS PSAAGGGAAS AHMSATALLQ KAAQMGATLS RPSNQGQMAS THSTTTTTNA GTGAANAAAA
401: SNVPGTGAGA LGFGAPHHFG AEERTTRPDH RDAGNGGNAA TGGGNEGLTR DFLGLRAFSH GDILSMAGFD PCMSSASSAA YEQGHHHHHH QSSKQWHV
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.