Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- endoplasmic reticulum 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010981.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY51986 | Canola | nucleus | 98.41 | 98.41 |
| CDY60366 | Canola | nucleus | 83.86 | 82.77 |
| AT1G25250.3 | Thale cress | nucleus | 84.13 | 82.6 |
| CDX84974 | Canola | nucleus | 83.07 | 81.98 |
| CDX96046 | Canola | nucleus | 45.5 | 73.82 |
| CDY09390 | Canola | nucleus | 19.31 | 61.34 |
| CDY04118 | Canola | nucleus | 19.31 | 61.34 |
| CDY14910 | Canola | nucleus | 20.63 | 58.65 |
| CDY04203 | Canola | plastid | 58.73 | 57.66 |
| CDY07400 | Canola | nucleus | 61.38 | 56.17 |
| CDY04204 | Canola | nucleus | 53.17 | 55.99 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 58.99 | 52.47 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 52.12 | 52.12 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 50.79 | 51.89 |
| KRH58582 | Soybean | nucleus | 59.52 | 51.14 |
| CDY72283 | Canola | nucleus | 25.4 | 50.79 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 51.06 | 50.79 |
| CDY37489 | Canola | nucleus | 24.34 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 49.35 |
| KRH42485 | Soybean | nucleus | 58.99 | 49.34 |
| CDY09400 | Canola | nucleus | 57.14 | 49.32 |
| CDY15800 | Canola | nucleus | 56.61 | 48.42 |
| CDY63960 | Canola | nucleus | 56.61 | 47.45 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 53.17 | 47.41 |
| CDY04102 | Canola | nucleus | 56.08 | 47.22 |
| CDY17620 | Canola | nucleus | 55.29 | 47.07 |
| CDY60095 | Canola | nucleus | 54.76 | 46.83 |
| CDY53540 | Canola | nucleus | 23.81 | 46.39 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 46.83 | 46.21 |
| Solyc05g054030.2.1 | Tomato | nucleus | 43.65 | 43.31 |
| GSMUA_Achr10P... | Banana | nucleus | 45.5 | 43.11 |
| CDY04117 | Canola | nucleus | 24.34 | 42.99 |
| TraesCS4B01G230800.1 | Wheat | nucleus, plastid | 45.5 | 42.47 |
| Zm00001d005871_P002 | Maize | nucleus | 49.21 | 42.18 |
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 45.77 | 41.79 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 45.77 | 41.69 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 52.91 | 40.73 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 52.91 | 40.73 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 45.77 | 40.71 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 52.91 | 40.65 |
| Os03t0237250-01 | Rice | plastid | 46.56 | 40.18 |
| Zm00001d020683_P001 | Maize | nucleus | 51.32 | 39.03 |
| CDY70142 | Canola | nucleus | 18.78 | 39.01 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 46.3 | 38.72 |
| EER96827 | Sorghum | nucleus | 50.79 | 38.48 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 45.24 | 38.17 |
| Zm00001d031759_P001 | Maize | nucleus | 52.12 | 38.03 |
| KXG39813 | Sorghum | nucleus, plastid | 46.03 | 37.91 |
| Os08t0467100-01 | Rice | nucleus | 53.17 | 37.71 |
| EES13982 | Sorghum | nucleus | 52.91 | 37.31 |
| CDX97281 | Canola | nucleus, plastid | 29.1 | 28.57 |
| CDX91304 | Canola | nucleus, plastid | 29.37 | 27.48 |
| CDY24490 | Canola | nucleus | 30.42 | 26.44 |
| CDX77936 | Canola | nucleus | 29.89 | 25.92 |
| CDY53836 | Canola | nucleus | 29.89 | 24.94 |
| CDY59418 | Canola | nucleus | 26.98 | 24.7 |
| CDX94759 | Canola | nucleus | 30.16 | 24.57 |
| CDY22307 | Canola | nucleus | 30.16 | 24.57 |
| CDX86010 | Canola | nucleus | 29.1 | 24.55 |
| CDX75732 | Canola | nucleus | 28.04 | 23.93 |
| CDX89862 | Canola | nucleus | 29.63 | 23.33 |
| CDX82515 | Canola | nucleus | 26.98 | 23.13 |
| CDY67009 | Canola | nucleus | 29.1 | 23.11 |
| CDY18188 | Canola | nucleus | 29.1 | 22.96 |
| CDY57128 | Canola | nucleus | 29.63 | 22.76 |
| CDY32514 | Canola | nucleus | 29.37 | 22.65 |
| CDY45271 | Canola | nucleus | 24.87 | 22.6 |
| CDX81653 | Canola | nucleus | 27.78 | 22.48 |
| CDY15814 | Canola | nucleus | 28.04 | 22.41 |
| CDX81372 | Canola | nucleus | 28.84 | 22.29 |
| CDY44344 | Canola | nucleus | 29.1 | 22.0 |
| CDX80854 | Canola | nucleus | 29.37 | 21.98 |
| CDY17440 | Canola | nucleus | 27.78 | 21.97 |
| CDY51742 | Canola | nucleus | 28.04 | 21.9 |
| CDY11241 | Canola | nucleus | 29.1 | 21.87 |
| CDY55238 | Canola | nucleus | 28.04 | 21.81 |
| CDY10404 | Canola | nucleus | 29.1 | 21.7 |
| CDX97521 | Canola | nucleus | 27.78 | 21.65 |
| CDY45270 | Canola | nucleus | 25.4 | 21.33 |
| CDY17614 | Canola | nucleus, plastid | 28.84 | 21.25 |
| CDY03080 | Canola | nucleus, plastid | 28.84 | 21.12 |
| CDX70328 | Canola | nucleus | 28.57 | 21.01 |
| CDY03081 | Canola | nucleus | 28.31 | 20.42 |
| CDY17615 | Canola | nucleus | 28.31 | 20.3 |
| CDY09391 | Canola | nucleus | 29.1 | 19.4 |
| CDY15811 | Canola | nucleus | 29.1 | 19.37 |
| CDY12268 | Canola | nucleus | 20.37 | 17.26 |
| CDY68983 | Canola | nucleus | 16.93 | 16.37 |
| CDY70938 | Canola | cytosol, nucleus | 8.73 | 12.09 |
| CDY67587 | Canola | cytosol, nucleus | 6.88 | 11.56 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078HGY8 | UniProt:A0A078HGY8 | EnsemblPlants:CDY36123 | ProteinID:CDY36123 |
| ProteinID:CDY36123.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00059963001 |
| InterPro:IPR013087 | PFAM:PF12874 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF43 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002545C60 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
BnaA08g19250DBnaA08g19250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGY8]
Coordinates
chrLK032367:-:226419..228683
Molecular Weight (calculated)
43041.3 Da
IEP (calculated)
8.980
GRAVY (calculated)
-0.738
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDYEKNNNH QNFPSSSSPD LLLAINGAAV INKRKRRPAG TPDPDADVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKREKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVIKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRGPQPTNHR
201: PLHQNTEGHA TPSRTFLTPS INPLLHGVPF LRSPQASHQQ SLAFASSAPF ENLQLQLSIG MTKTQVKRNE KGESSLTMER AIEEARRAEK MRQEARRQIE
301: MAQVDFEKAK NIRKEAKAEL EKAHVVREEA IKRINATMLE ITCHSCKDLF QLPVMADEST SSLVTCYVSS ATTEGEAE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVIKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRGPQPTNHR
201: PLHQNTEGHA TPSRTFLTPS INPLLHGVPF LRSPQASHQQ SLAFASSAPF ENLQLQLSIG MTKTQVKRNE KGESSLTMER AIEEARRAEK MRQEARRQIE
301: MAQVDFEKAK NIRKEAKAEL EKAHVVREEA IKRINATMLE ITCHSCKDLF QLPVMADEST SSLVTCYVSS ATTEGEAE
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.